Literature DB >> 21653943

Chromatin boundaries require functional collaboration between the hSET1 and NURF complexes.

Xingguo Li1, Shaohua Wang, Ying Li, Changwang Deng, Laurie A Steiner, Hua Xiao, Carl Wu, Jörg Bungert, Patrick G Gallagher, Gary Felsenfeld, Yi Qiu, Suming Huang.   

Abstract

Chromatin insulators protect erythroid genes from being silenced during erythropoiesis, and the disruption of barrier insulator function in erythroid membrane gene loci results in mild or severe anemia. We showed previously that the USF1/2-bound 5'HS4 insulator mediates chromatin barrier activity in the erythroid-specific chicken β-globin locus. It is currently not known how insulators establish such a barrier. To understand the function of USF1, we purified USF1-associated protein complexes and found that USF1 forms a multiprotein complex with hSET1 and NURF, thus exhibiting histone H3K4 methyltransferase- and ATP-dependent nucleosome remodeling activities, respectively. Both SET1 and NURF are recruited to the 5'HS4 insulator by USF1 to retain the active chromatin structure in erythrocytes. Knock-down of NURF resulted in a rapid loss of barrier activity accompanied by an alteration of nucleosome positioning, increased occupancy of the nucleosome-free linker region at the insulator site, and increased repressive H3K27me3 levels in the vicinity of the HS4 insulator. Furthermore, suppression of SET1 reduced barrier activity, decreased H3K4me2 and acH3K9/K14, and diminished the recruitment of BPTF at several erythroid-specific barrier insulator sites. Therefore, our data reveal a synergistic role of hSET1 and NURF in regulating the USF-bound barrier insulator to prevent erythroid genes from encroachment of heterochromatin.

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Year:  2011        PMID: 21653943      PMCID: PMC3152501          DOI: 10.1182/blood-2010-11-319111

Source DB:  PubMed          Journal:  Blood        ISSN: 0006-4971            Impact factor:   22.113


  46 in total

Review 1.  Insulators: many functions, many mechanisms.

Authors:  Adam G West; Miklos Gaszner; Gary Felsenfeld
Journal:  Genes Dev       Date:  2002-02-01       Impact factor: 11.361

2.  Dual functions of largest NURF subunit NURF301 in nucleosome sliding and transcription factor interactions.

Authors:  H Xiao; R Sandaltzopoulos; H M Wang; A Hamiche; R Ranallo; K M Lee; D Fu; C Wu
Journal:  Mol Cell       Date:  2001-09       Impact factor: 17.970

3.  Position-effect protection and enhancer blocking by the chicken beta-globin insulator are separable activities.

Authors:  Félix Recillas-Targa; Michael J Pikaart; Bonnie Burgess-Beusse; Adam C Bell; Michael D Litt; Adam G West; Miklos Gaszner; Gary Felsenfeld
Journal:  Proc Natl Acad Sci U S A       Date:  2002-05-14       Impact factor: 11.205

4.  Cloning and characterization of the murine Imitation Switch (ISWI) genes: differential expression patterns suggest distinct developmental roles for Snf2h and Snf2l.

Authors:  M A Lazzaro; D J Picketts
Journal:  J Neurochem       Date:  2001-05       Impact factor: 5.372

5.  The barrier function of an insulator couples high histone acetylation levels with specific protection of promoter DNA from methylation.

Authors:  Vesco J Mutskov; Catherine M Farrell; Paul A Wade; Alan P Wolffe; Gary Felsenfeld
Journal:  Genes Dev       Date:  2002-06-15       Impact factor: 11.361

6.  Barrier proteins remodel and modify chromatin to restrict silenced domains.

Authors:  Masaya Oki; Lourdes Valenzuela; Tomoko Chiba; Takashi Ito; Rohinton T Kamakaka
Journal:  Mol Cell Biol       Date:  2004-03       Impact factor: 4.272

7.  Formation of boundaries of transcriptionally silent chromatin by nucleosome-excluding structures.

Authors:  Xin Bi; Qun Yu; Joseph J Sandmeier; Yanfei Zou
Journal:  Mol Cell Biol       Date:  2004-03       Impact factor: 4.272

8.  WSTF-ISWI chromatin remodeling complex targets heterochromatic replication foci.

Authors:  Ludmila Bozhenok; Paul A Wade; Patrick Varga-Weisz
Journal:  EMBO J       Date:  2002-05-01       Impact factor: 11.598

9.  Role of Ras signaling in erythroid differentiation of mouse fetal liver cells: functional analysis by a flow cytometry-based novel culture system.

Authors:  Jing Zhang; Merav Socolovsky; Alec W Gross; Harvey F Lodish
Journal:  Blood       Date:  2003-08-07       Impact factor: 22.113

10.  Hematopoietic expression of HOXB4 is regulated in normal and leukemic stem cells through transcriptional activation of the HOXB4 promoter by upstream stimulating factor (USF)-1 and USF-2.

Authors:  D M Giannola; W D Shlomchik; M Jegathesan; D Liebowitz; C S Abrams; T Kadesch; A Dancis; S G Emerson
Journal:  J Exp Med       Date:  2000-11-20       Impact factor: 14.307

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  25 in total

1.  SET domain containing 1B gene is mutated in primary hepatic neuroendocrine tumors.

Authors:  Penghui Yang; Xuanlin Huang; Chengcai Lai; Lin Li; Tieling Li; Peide Huang; Songying Ouyang; Jin Yan; Sijie Cheng; Guanglin Lei; Zhaohai Wang; Linxiang Yu; Zhixian Hong; Ruisheng Li; Hui Dong; Cheng Wang; Yinghao Yu; Xuan Wang; Xianghong Li; Liming Wang; Fudong Lv; Ye Yin; Huanming Yang; Jianxun Song; Qiang Gao; Xiliang Wang; Shaogeng Zhang
Journal:  Int J Cancer       Date:  2019-05-17       Impact factor: 7.396

2.  Chromatin rules.

Authors:  Ying Li; Suming Huang
Journal:  Stem Cell Investig       Date:  2016-02-23

Review 3.  The nucleosome remodeling factor.

Authors:  Suehyb G Alkhatib; Joseph W Landry
Journal:  FEBS Lett       Date:  2011-09-09       Impact factor: 4.124

4.  HoxBlinc RNA Recruits Set1/MLL Complexes to Activate Hox Gene Expression Patterns and Mesoderm Lineage Development.

Authors:  Changwang Deng; Ying Li; Lei Zhou; Joonseok Cho; Bhavita Patel; Naohiro Terada; Yangqiu Li; Jörg Bungert; Yi Qiu; Suming Huang
Journal:  Cell Rep       Date:  2015-12-24       Impact factor: 9.423

Review 5.  Ten principles of heterochromatin formation and function.

Authors:  Robin C Allshire; Hiten D Madhani
Journal:  Nat Rev Mol Cell Biol       Date:  2017-12-13       Impact factor: 94.444

6.  Setd1a regulates progenitor B-cell-to-precursor B-cell development through histone H3 lysine 4 trimethylation and Ig heavy-chain rearrangement.

Authors:  Betsabeh Khoramian Tusi; Changwang Deng; Tal Salz; Leilani Zeumer; Yangqiu Li; Chi Wai Eric So; Laurence M Morel; Yi Qiu; Suming Huang
Journal:  FASEB J       Date:  2014-12-30       Impact factor: 5.191

7.  Transcription termination sequences support the expression of transgene product secreted with milk.

Authors:  Alexey Deykin; Maxim Tikhonov; Vladislav Kalmykov; Igor Korobko; Pavel Georgiev; Oksana Maksimenko
Journal:  Transgenic Res       Date:  2019-03-28       Impact factor: 2.788

8.  Aberrant TAL1 activation is mediated by an interchromosomal interaction in human T-cell acute lymphoblastic leukemia.

Authors:  B Patel; Y Kang; K Cui; M Litt; M S J Riberio; C Deng; T Salz; S Casada; X Fu; Y Qiu; K Zhao; S Huang
Journal:  Leukemia       Date:  2013-05-23       Impact factor: 11.528

9.  Hydroxymethylation at gene regulatory regions directs stem/early progenitor cell commitment during erythropoiesis.

Authors:  Jozef Madzo; Hui Liu; Alexis Rodriguez; Aparna Vasanthakumar; Sriram Sundaravel; Donne Bennett D Caces; Timothy J Looney; Li Zhang; Janet B Lepore; Trisha Macrae; Robert Duszynski; Alan H Shih; Chun-Xiao Song; Miao Yu; Yiting Yu; Robert Grossman; Brigitte Raumann; Amit Verma; Chuan He; Ross L Levine; Don Lavelle; Bruce T Lahn; Amittha Wickrema; Lucy A Godley
Journal:  Cell Rep       Date:  2013-12-27       Impact factor: 9.423

10.  hSETD1A regulates Wnt target genes and controls tumor growth of colorectal cancer cells.

Authors:  Tal Salz; Guangyao Li; Frederic Kaye; Lei Zhou; Yi Qiu; Suming Huang
Journal:  Cancer Res       Date:  2013-11-18       Impact factor: 12.701

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