Literature DB >> 33690632

Indole-3-acetic acid is a physiological inhibitor of TORC1 in yeast.

Raffaele Nicastro1, Serena Raucci1, Agnès H Michel2, Michael Stumpe1, Guillermo Miguel Garcia Osuna1, Malika Jaquenoud1, Benoît Kornmann2, Claudio De Virgilio1.   

Abstract

Indole-3-acetic acid (IAA) is the most common, naturally occurring phytohormone that regulates cell division, differentiation, and senescence in plants. The capacity to synthesize IAA is also widespread among plant-associated bacterial and fungal species, which may use IAA as an effector molecule to define their relationships with plants or to coordinate their physiological behavior through cell-cell communication. Fungi, including many species that do not entertain a plant-associated life style, are also able to synthesize IAA, but the physiological role of IAA in these fungi has largely remained enigmatic. Interestingly, in this context, growth of the budding yeast Saccharomyces cerevisiae is sensitive to extracellular IAA. Here, we use a combination of various genetic approaches including chemical-genetic profiling, SAturated Transposon Analysis in Yeast (SATAY), and genetic epistasis analyses to identify the mode-of-action by which IAA inhibits growth in yeast. Surprisingly, these analyses pinpointed the target of rapamycin complex 1 (TORC1), a central regulator of eukaryotic cell growth, as the major growth-limiting target of IAA. Our biochemical analyses further demonstrate that IAA inhibits TORC1 both in vivo and in vitro. Intriguingly, we also show that yeast cells are able to synthesize IAA and specifically accumulate IAA upon entry into stationary phase. Our data therefore suggest that IAA contributes to proper entry of yeast cells into a quiescent state by acting as a metabolic inhibitor of TORC1.

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Year:  2021        PMID: 33690632      PMCID: PMC7978357          DOI: 10.1371/journal.pgen.1009414

Source DB:  PubMed          Journal:  PLoS Genet        ISSN: 1553-7390            Impact factor:   5.917


  87 in total

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2.  Identification of a small molecule yeast TORC1 inhibitor with a multiplex screen based on flow cytometry.

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Journal:  ACS Chem Biol       Date:  2012-02-01       Impact factor: 5.100

Review 3.  Indole-3-acetic acid: A widespread physiological code in interactions of fungi with other organisms.

Authors:  Shih-Feng Fu; Jyuan-Yu Wei; Hung-Wei Chen; Yen-Yu Liu; Hsueh-Yu Lu; Jui-Yu Chou
Journal:  Plant Signal Behav       Date:  2015

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6.  Functional mapping of yeast genomes by saturated transposition.

Authors:  Agnès H Michel; Riko Hatakeyama; Philipp Kimmig; Meret Arter; Matthias Peter; Joao Matos; Claudio De Virgilio; Benoît Kornmann
Journal:  Elife       Date:  2017-05-08       Impact factor: 8.140

Review 7.  Quorum sensing signal-response systems in Gram-negative bacteria.

Authors:  Kai Papenfort; Bonnie L Bassler
Journal:  Nat Rev Microbiol       Date:  2016-08-11       Impact factor: 60.633

8.  The new modern era of yeast genomics: community sequencing and the resulting annotation of multiple Saccharomyces cerevisiae strains at the Saccharomyces Genome Database.

Authors:  Stacia R Engel; J Michael Cherry
Journal:  Database (Oxford)       Date:  2013-03-13       Impact factor: 3.451

9.  mTOR kinase structure, mechanism and regulation.

Authors:  Haijuan Yang; Derek G Rudge; Joseph D Koos; Bhamini Vaidialingam; Hyo J Yang; Nikola P Pavletich
Journal:  Nature       Date:  2013-05-01       Impact factor: 49.962

10.  TORC1 and TORC2 work together to regulate ribosomal protein S6 phosphorylation in Saccharomyces cerevisiae.

Authors:  Seda Yerlikaya; Madeleine Meusburger; Romika Kumari; Alexandre Huber; Dorothea Anrather; Michael Costanzo; Charles Boone; Gustav Ammerer; Pavel V Baranov; Robbie Loewith
Journal:  Mol Biol Cell       Date:  2015-11-18       Impact factor: 4.138

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  4 in total

1.  SAturated Transposon Analysis in Yeast (SATAY) for Deep Functional Mapping of Yeast Genomes.

Authors:  Agnès H Michel; Benoît Kornmann
Journal:  Methods Mol Biol       Date:  2022

2.  The auxin-inducible degron 2 (AID2) system enables controlled protein knockdown during embryogenesis and development in Caenorhabditis elegans.

Authors:  Takefumi Negishi; Saho Kitagawa; Natsumi Horii; Yuka Tanaka; Nami Haruta; Asako Sugimoto; Hitoshi Sawa; Ken-Ichiro Hayashi; Masahiko Harata; Masato T Kanemaki
Journal:  Genetics       Date:  2022-02-04       Impact factor: 4.402

3.  Manganese is a physiologically relevant TORC1 activator in yeast and mammals.

Authors:  Raffaele Nicastro; Hélène Gaillard; Laura Zarzuela; Marie-Pierre Péli-Gulli; Elisabet Fernández-García; Mercedes Tomé; Néstor García-Rodríguez; Raúl V Durán; Claudio De Virgilio; Ralf Erik Wellinger
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4.  A bacterial chemoreceptor that mediates chemotaxis to two different plant hormones.

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  4 in total

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