Literature DB >> 33685798

Transcription-Coupled DNA Repair: From Mechanism to Human Disorder.

Diana van den Heuvel1, Yana van der Weegen1, Daphne E C Boer1, Tomoo Ogi2, Martijn S Luijsterburg3.   

Abstract

DNA lesions pose a major obstacle during gene transcription by RNA polymerase II (RNAPII) enzymes. The transcription-coupled DNA repair (TCR) pathway eliminates such DNA lesions. Inherited defects in TCR cause severe clinical syndromes, including Cockayne syndrome (CS). The molecular mechanism of TCR and the molecular origin of CS have long remained enigmatic. Here we explore new advances in our understanding of how TCR complexes assemble through cooperative interactions between repair factors stimulated by RNAPII ubiquitylation. Mounting evidence suggests that RNAPII ubiquitylation activates TCR complex assembly during repair and, in parallel, promotes processing and degradation of RNAPII to prevent prolonged stalling. The fate of stalled RNAPII is therefore emerging as a crucial link between TCR and associated human diseases.
Copyright © 2021 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Cockayne syndrome; RNA polymerase II; transcription-coupled DNA repair; ubiquitylation

Mesh:

Substances:

Year:  2021        PMID: 33685798     DOI: 10.1016/j.tcb.2021.02.007

Source DB:  PubMed          Journal:  Trends Cell Biol        ISSN: 0962-8924            Impact factor:   20.808


  10 in total

Review 1.  Mechanism of action of nucleotide excision repair machinery.

Authors:  Areetha D'Souza; Alexandra M Blee; Walter J Chazin
Journal:  Biochem Soc Trans       Date:  2022-02-28       Impact factor: 4.919

Review 2.  Nucleotide excision repair leaves a mark on chromatin: DNA damage detection in nucleosomes.

Authors:  Katja Apelt; Hannes Lans; Orlando D Schärer; Martijn S Luijsterburg
Journal:  Cell Mol Life Sci       Date:  2021-11-03       Impact factor: 9.261

Review 3.  The Relevance of G-Quadruplexes for DNA Repair.

Authors:  Rebecca Linke; Michaela Limmer; Stefan A Juranek; Annkristin Heine; Katrin Paeschke
Journal:  Int J Mol Sci       Date:  2021-11-22       Impact factor: 5.923

Review 4.  Existing Evidence for the Repurposing of PARP-1 Inhibitors in Rare Demyelinating Diseases.

Authors:  Marianna Mekhaeil; Kumlesh Kumar Dev; Melissa Jane Conroy
Journal:  Cancers (Basel)       Date:  2022-01-29       Impact factor: 6.639

5.  XPC-PARP complexes engage the chromatin remodeler ALC1 to catalyze global genome DNA damage repair.

Authors:  Charlotte Blessing; Katja Apelt; Diana van den Heuvel; Claudia Gonzalez-Leal; Magdalena B Rother; Melanie van der Woude; Román González-Prieto; Adi Yifrach; Avital Parnas; Rashmi G Shah; Tia Tyrsett Kuo; Daphne E C Boer; Jin Cai; Angela Kragten; Hyun-Suk Kim; Orlando D Schärer; Alfred C O Vertegaal; Girish M Shah; Sheera Adar; Hannes Lans; Haico van Attikum; Andreas G Ladurner; Martijn S Luijsterburg
Journal:  Nat Commun       Date:  2022-08-13       Impact factor: 17.694

6.  A novel, rapid and sensitive flow cytometry method reveals degradation of promoter proximal paused RNAPII in the presence and absence of UV.

Authors:  Lilli T E Bay; Randi G Syljuåsen; Helga B Landsverk
Journal:  Nucleic Acids Res       Date:  2022-08-26       Impact factor: 19.160

7.  Complex genomic patterns of abasic sites in mammalian DNA revealed by a high-resolution SSiNGLe-AP method.

Authors:  Ye Cai; Huifen Cao; Fang Wang; Yufei Zhang; Philipp Kapranov
Journal:  Nat Commun       Date:  2022-10-05       Impact factor: 17.694

8.  A new technique for genome-wide mapping of nucleotide excision repair without immunopurification of damaged DNA.

Authors:  Sizhong Wu; Yanchao Huang; Christopher P Selby; Meng Gao; Aziz Sancar; Jinchuan Hu
Journal:  J Biol Chem       Date:  2022-03-23       Impact factor: 5.486

9.  Structural basis of human transcription-DNA repair coupling.

Authors:  Goran Kokic; Felix R Wagner; Aleksandar Chernev; Henning Urlaub; Patrick Cramer
Journal:  Nature       Date:  2021-09-15       Impact factor: 49.962

Review 10.  RNA polymerase pausing, stalling and bypass during transcription of damaged DNA: from molecular basis to functional consequences.

Authors:  Aleksei Agapov; Anna Olina; Andrey Kulbachinskiy
Journal:  Nucleic Acids Res       Date:  2022-04-08       Impact factor: 16.971

  10 in total

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