Literature DB >> 33673493

The Role of the Reanalysis of Genetic Test Results in the Diagnosis of Dysmorphic Syndrome Caused by Inherited xq24 Deletion including the UBE2A and CXorf56 Genes.

Ewelina Wolańska1, Agnieszka Pollak2, Małgorzata Rydzanicz2, Karolina Pesz3, Magdalena Kłaniewska1, Anna Rozensztrauch4, Paweł Skiba3, Piotr Stawiński2, Rafał Płoski2, Robert Śmigiel1.   

Abstract

Psychomotor delay, hypotonia, and intellectual disability, as well as heart defects, urogenital malformations, and characteristic cranio-facial dysmorphism are the main symptoms of dysmorphic syndrome associated with intergenic deletion in the Xq24 chromosome region including the UBE2A and CXorf56 genes. To date, there is limited information in the literature about the symptoms and clinical course of the Xq24 deletion. Here, we present a case of Xq24 deletion including the UBE2A and CXorf56 genes in a nine-year-old boy, in whom the array comparative genomic hybridization (array-CGH) and whole exome sequencing (WES) tests were performed in 2015 with normal results. The WES results were reanalyzed in 2019. Intergenic, hemizygous deletion in the Xq24 chromosome region including the UBE2A and CXorf56 genes was revealed and subsequently confirmed in the array-CGH study as the deletion of 35kb in the Xq24 region. Additionally, the carriership of deletion in the mother of the child was confirmed.

Entities:  

Keywords:  CXorf56 gene; UBE2A gene; contiguous gene deletion Xq24; dysmorphic syndrome; intellectual disability

Mesh:

Substances:

Year:  2021        PMID: 33673493      PMCID: PMC7997426          DOI: 10.3390/genes12030350

Source DB:  PubMed          Journal:  Genes (Basel)        ISSN: 2073-4425            Impact factor:   4.096


  15 in total

Review 1.  Exome sequencing as a tool for Mendelian disease gene discovery.

Authors:  Michael J Bamshad; Sarah B Ng; Abigail W Bigham; Holly K Tabor; Mary J Emond; Deborah A Nickerson; Jay Shendure
Journal:  Nat Rev Genet       Date:  2011-09-27       Impact factor: 53.242

2.  CXorf56, a dendritic neuronal protein, identified as a new candidate gene for X-linked intellectual disability.

Authors:  Annemieke J M H Verkerk; Shimriet Zeidler; Guido Breedveld; Lydia Overbeek; Daphne Huigh; Linda Koster; Herma van der Linde; Celine de Esch; Lies-Anne Severijnen; Bert B A de Vries; Sigrid M A Swagemakers; Rob Willemsen; A Jeannette M Hoogeboom; Peter J van der Spek; Ben A Oostra
Journal:  Eur J Hum Genet       Date:  2018-01-26       Impact factor: 4.246

3.  Novel deletion at Xq24 including the UBE2A gene in a patient with X-linked mental retardation.

Authors:  Shozo Honda; Koji O Orii; Junya Kobayashi; Shin Hayashi; Atsushi Imamura; Issei Imoto; Eiji Nakagawa; Yu-ichi Goto; Johji Inazawa
Journal:  J Hum Genet       Date:  2010-03-26       Impact factor: 3.172

Review 4.  Consensus statement: chromosomal microarray is a first-tier clinical diagnostic test for individuals with developmental disabilities or congenital anomalies.

Authors:  David T Miller; Margaret P Adam; Swaroop Aradhya; Leslie G Biesecker; Arthur R Brothman; Nigel P Carter; Deanna M Church; John A Crolla; Evan E Eichler; Charles J Epstein; W Andrew Faucett; Lars Feuk; Jan M Friedman; Ada Hamosh; Laird Jackson; Erin B Kaminsky; Klaas Kok; Ian D Krantz; Robert M Kuhn; Charles Lee; James M Ostell; Carla Rosenberg; Stephen W Scherer; Nancy B Spinner; Dimitri J Stavropoulos; James H Tepperberg; Erik C Thorland; Joris R Vermeesch; Darrel J Waggoner; Michael S Watson; Christa Lese Martin; David H Ledbetter
Journal:  Am J Hum Genet       Date:  2010-05-14       Impact factor: 11.025

5.  UBE2A deficiency syndrome: Mild to severe intellectual disability accompanied by seizures, absent speech, urogenital, and skin anomalies in male patients.

Authors:  Nicole de Leeuw; Saskia Bulk; Andrew Green; Lane Jaeckle-Santos; Linda A Baker; Andrew R Zinn; Tjitske Kleefstra; Jasper J van der Smagt; Angela Maria Vianne Morgante; Bert B A de Vries; Hans van Bokhoven; Arjan P M de Brouwer
Journal:  Am J Med Genet A       Date:  2010-12       Impact factor: 2.802

6.  Novel missense mutations in the ubiquitination-related gene UBE2A cause a recognizable X-linked mental retardation syndrome.

Authors:  B Budny; M Badura-Stronka; A Materna-Kiryluk; A Tzschach; M Raynaud; A Latos-Bielenska; H H Ropers
Journal:  Clin Genet       Date:  2010-04-19       Impact factor: 4.438

7.  The utility of chromosomal microarray analysis in developmental and behavioral pediatrics.

Authors:  Arthur L Beaudet
Journal:  Child Dev       Date:  2013-01-11

8.  UBE2A deficiency syndrome: a report of two unrelated cases with large Xq24 deletions encompassing UBE2A gene.

Authors:  Sofia Thunstrom; Liv Sodermark; Liz Ivarsson; Lena Samuelsson; Margarita Stefanova
Journal:  Am J Med Genet A       Date:  2014-10-06       Impact factor: 2.802

9.  Dysmorphology at a distance: results of a web-based diagnostic service.

Authors:  S Douzgou; J Clayton-Smith; S Gardner; R Day; P Griffiths; K Strong
Journal:  Eur J Hum Genet       Date:  2013-07-10       Impact factor: 4.246

10.  X-linked intellectual disability type Nascimento is a clinically distinct, probably underdiagnosed entity.

Authors:  Johanna Christina Czeschik; Peter Bauer; Karin Buiting; Claudia Dufke; Encarna Guillén-Navarro; Diana S Johnson; Udo Koehler; Vanesa López-González; Hermann-Josef Lüdecke; Alison Male; Deborah Morrogh; Angelika Rieß; Andreas Tzschach; Dagmar Wieczorek; Alma Kuechler
Journal:  Orphanet J Rare Dis       Date:  2013-09-21       Impact factor: 4.123

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  2 in total

1.  Clinical, Immunological, and Genetic Findings in a Cohort of Patients with the DiGeorge Phenotype without 22q11.2 Deletion.

Authors:  Antonino Maria Quintilio Alberio; Annalisa Legitimo; Veronica Bertini; Giampiero I Baroncelli; Giorgio Costagliola; Angelo Valetto; Rita Consolini
Journal:  J Clin Med       Date:  2022-04-05       Impact factor: 4.241

2.  A novel UBE2A splice site variant causing intellectual disability type Nascimento.

Authors:  Shuyuan Yan; Yanling Wang; Ying Chen; Hongxia Yuan; Xiaoni Kuang; Da Hou; Xueyi Li; Linglin Pan; Guangwen Huang; Jun He; Tuanmei Wang; Xiangwen Peng
Journal:  Clin Case Rep       Date:  2022-07-11
  2 in total

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