Literature DB >> 33672023

Evaluating the Influence of a G-Quadruplex Prone Sequence on the Transactivation Potential by Wild-Type and/or Mutant P53 Family Proteins through a Yeast-Based Functional Assay.

Paola Monti1, Vaclav Brazda2,3, Natália Bohálová2,4, Otília Porubiaková2,3, Paola Menichini1, Andrea Speciale1, Renata Bocciardi5,6, Alberto Inga7, Gilberto Fronza1.   

Abstract

P53, P63, and P73 proteins belong to the P53 family of transcription factors, sharing a common gene organization that, from the P1 and P2 promoters, produces two groups of mRNAs encoding proteins with different N-terminal regions; moreover, alternative splicing events at C-terminus further contribute to the generation of multiple isoforms. P53 family proteins can influence a plethora of cellular pathways mainly through the direct binding to specific DNA sequences known as response elements (REs), and the transactivation of the corresponding target genes. However, the transcriptional activation by P53 family members can be regulated at multiple levels, including the DNA topology at responsive promoters. Here, by using a yeast-based functional assay, we evaluated the influence that a G-quadruplex (G4) prone sequence adjacent to the p53 RE derived from the apoptotic PUMA target gene can exert on the transactivation potential of full-length and N-terminal truncated P53 family α isoforms (wild-type and mutant). Our results show that the presence of a G4 prone sequence upstream or downstream of the P53 RE leads to significant changes in the relative activity of P53 family proteins, emphasizing the potential role of structural DNA features as modifiers of P53 family functions at target promoter sites.

Entities:  

Keywords:  G-quadruplex (G4) prone sequence; P53 family; transactivation potential; wild-type and mutant P53/P63 proteins; yeast

Mesh:

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Year:  2021        PMID: 33672023      PMCID: PMC7919268          DOI: 10.3390/genes12020277

Source DB:  PubMed          Journal:  Genes (Basel)        ISSN: 2073-4425            Impact factor:   4.096


  86 in total

1.  p63 consensus DNA-binding site: identification, analysis and application into a p63MH algorithm.

Authors:  C A Perez; J Ott; D J Mays; J A Pietenpol
Journal:  Oncogene       Date:  2007-06-11       Impact factor: 9.867

2.  Yeast As a Chassis for Developing Functional Assays to Study Human P53.

Authors:  Lucilia Saraiva; Gilberto Fronza; Alberto Inga; Paola Monti; Bartolomeo Bosco; Sara Gomes
Journal:  J Vis Exp       Date:  2019-08-04       Impact factor: 1.355

Review 3.  G-Quadruplexes in RNA Biology: Recent Advances and Future Directions.

Authors:  Leïla Dumas; Pauline Herviou; Erik Dassi; Anne Cammas; Stefania Millevoi
Journal:  Trends Biochem Sci       Date:  2020-12-07       Impact factor: 13.807

Review 4.  Recent Update on Targeting c-MYC G-Quadruplexes by Small Molecules for Anticancer Therapeutics.

Authors:  Ritapa Chaudhuri; Semantee Bhattacharya; Jyotirmayee Dash; Santanu Bhattacharya
Journal:  J Med Chem       Date:  2020-12-23       Impact factor: 7.446

5.  Diversity in DNA recognition by p53 revealed by crystal structures with Hoogsteen base pairs.

Authors:  Malka Kitayner; Haim Rozenberg; Remo Rohs; Oded Suad; Dov Rabinovich; Barry Honig; Zippora Shakked
Journal:  Nat Struct Mol Biol       Date:  2010-04-04       Impact factor: 15.369

6.  DeltaNp63alpha-dependent expression of Id-3 distinctively suppresses the invasiveness of human squamous cell carcinoma.

Authors:  Koichiro Higashikawa; Shingo Yoneda; Kei Tobiume; Masao Saitoh; Masayuki Taki; Yoshitsugu Mitani; Hideo Shigeishi; Shigehiro Ono; Nobuyuki Kamata
Journal:  Int J Cancer       Date:  2009-06-15       Impact factor: 7.396

Review 7.  Human transcription factors in yeast: the fruitful examples of P53 and NF-кB.

Authors:  Vasundhara Sharma; Paola Monti; Gilberto Fronza; Alberto Inga
Journal:  FEMS Yeast Res       Date:  2016-09-27       Impact factor: 2.796

8.  DeltaNp73 can modulate the expression of various genes in a p53-independent fashion.

Authors:  Natalia N Kartasheva; Claudia Lenz-Bauer; Oliver Hartmann; Helmut Schäfer; Martin Eilers; Matthias Dobbelstein
Journal:  Oncogene       Date:  2003-11-13       Impact factor: 9.867

9.  Wild-type p53 binds to MYC promoter G-quadruplex.

Authors:  Marek Petr; Robert Helma; Alena Polášková; Aneta Krejčí; Zuzana Dvořáková; Iva Kejnovská; Lucie Navrátilová; Matej Adámik; Michaela Vorlíčková; Marie Brázdová
Journal:  Biosci Rep       Date:  2016-10-14       Impact factor: 3.840

10.  IFI16 Preferentially Binds to DNA with Quadruplex Structure and Enhances DNA Quadruplex Formation.

Authors:  Lucia Hároníková; Jan Coufal; Iva Kejnovská; Eva B Jagelská; Miroslav Fojta; Petra Dvořáková; Petr Muller; Borivoj Vojtesek; Václav Brázda
Journal:  PLoS One       Date:  2016-06-09       Impact factor: 3.240

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  2 in total

1.  DAXX-ATRX regulation of p53 chromatin binding and DNA damage response.

Authors:  Nitish Gulve; Chenhe Su; Zhong Deng; Samantha S Soldan; Olga Vladimirova; Jayamanna Wickramasinghe; Hongwu Zheng; Andrew V Kossenkov; Paul M Lieberman
Journal:  Nat Commun       Date:  2022-08-26       Impact factor: 17.694

2.  A CpG island promoter drives the CXXC5 gene expression.

Authors:  Pelin Yaşar; Gizem Kars; Kerim Yavuz; Gamze Ayaz; Çerağ Oğuztüzün; Ecenaz Bilgen; Zeynep Suvacı; Özgül Persil Çetinkol; Tolga Can; Mesut Muyan
Journal:  Sci Rep       Date:  2021-08-02       Impact factor: 4.379

  2 in total

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