Literature DB >> 33670093

Single Molecule Characterization of Amyloid Oligomers.

Jie Yang1,2, Sarah Perrett1,3, Si Wu1,3.   

Abstract

The misfolding and aggregation of polypeptide chains into β-sheet-rich amyloid fibrils is associated with a wide range of neurodegenerative diseases. Growing evidence indicates that the oligomeric intermediates populated in the early stages of amyloid formation rather than the mature fibrils are responsible for the cytotoxicity and pathology and are potentially therapeutic targets. However, due to the low-populated, transient, and heterogeneous nature of amyloid oligomers, they are hard to characterize by conventional bulk methods. The development of single molecule approaches provides a powerful toolkit for investigating these oligomeric intermediates as well as the complex process of amyloid aggregation at molecular resolution. In this review, we present an overview of recent progress in characterizing the oligomerization of amyloid proteins by single molecule fluorescence techniques, including single-molecule Förster resonance energy transfer (smFRET), fluorescence correlation spectroscopy (FCS), single-molecule photobleaching and super-resolution optical imaging. We discuss how these techniques have been applied to investigate the different aspects of amyloid oligomers and facilitate understanding of the mechanism of amyloid aggregation.

Entities:  

Keywords:  amyloid oligomers; neurodegenerative disease; protein aggregation; single molecule fluorescence detection

Mesh:

Substances:

Year:  2021        PMID: 33670093      PMCID: PMC7916856          DOI: 10.3390/molecules26040948

Source DB:  PubMed          Journal:  Molecules        ISSN: 1420-3049            Impact factor:   4.411


  147 in total

1.  Super-resolution Imaging of Amyloid Structures over Extended Times by Using Transient Binding of Single Thioflavin T Molecules.

Authors:  Kevin Spehar; Tianben Ding; Yuanzi Sun; Niraja Kedia; Jin Lu; George R Nahass; Matthew D Lew; Jan Bieschke
Journal:  Chembiochem       Date:  2018-08-08       Impact factor: 3.164

2.  The First Step of Amyloidogenic Aggregation.

Authors:  Fabio Castello; Salvador Casares; Maria J Ruedas-Rama; Angel Orte
Journal:  J Phys Chem B       Date:  2015-06-17       Impact factor: 2.991

3.  Molecular composition of sub-stoichiometrically labeled α-synuclein oligomers determined by single-molecule photobleaching.

Authors:  Niels Zijlstra; Christian Blum; Ine M J Segers-Nolten; Mireille M A E Claessens; Vinod Subramaniam
Journal:  Angew Chem Int Ed Engl       Date:  2012-07-13       Impact factor: 15.336

4.  Interaction between A beta(1-42) and A beta(1-40) in Alzheimer's beta-amyloid fibril formation in vitro.

Authors:  K Hasegawa; I Yamaguchi; S Omata; F Gejyo; H Naiki
Journal:  Biochemistry       Date:  1999-11-23       Impact factor: 3.162

5.  In vivo demonstration that alpha-synuclein oligomers are toxic.

Authors:  Beate Winner; Roberto Jappelli; Samir K Maji; Paula A Desplats; Leah Boyer; Stefan Aigner; Claudia Hetzer; Thomas Loher; Marçal Vilar; Silvia Campioni; Christos Tzitzilonis; Alice Soragni; Sebastian Jessberger; Helena Mira; Antonella Consiglio; Emiley Pham; Eliezer Masliah; Fred H Gage; Roland Riek
Journal:  Proc Natl Acad Sci U S A       Date:  2011-02-15       Impact factor: 11.205

6.  Study on the structure and membrane disruption of the peptide oligomers constructed by hIAPP18-27 peptide and its d,l-alternating isomer.

Authors:  Shuang Wang; Feihong Meng; Ruijie Hao; Chunyu Wang; Fei Li
Journal:  Biochim Biophys Acta Biomembr       Date:  2019-10-29       Impact factor: 3.747

Review 7.  Mechanisms of protein aggregation and inhibition.

Authors:  Mohammad Khursheed Siddiqi; Parvez Alam; Sumit Kumar Chaturvedi; Yasser E Shahein; Rizwan Hasan Khan
Journal:  Front Biosci (Elite Ed)       Date:  2017-01-01

8.  Structural characterization of toxic oligomers that are kinetically trapped during α-synuclein fibril formation.

Authors:  Serene W Chen; Srdja Drakulic; Emma Deas; Myriam Ouberai; Francesco A Aprile; Rocío Arranz; Samuel Ness; Cintia Roodveldt; Tim Guilliams; Erwin J De-Genst; David Klenerman; Nicholas W Wood; Tuomas P J Knowles; Carlos Alfonso; Germán Rivas; Andrey Y Abramov; José María Valpuesta; Christopher M Dobson; Nunilo Cremades
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-08       Impact factor: 11.205

9.  Direct observation of single amyloid-β(1-40) oligomers on live cells: binding and growth at physiological concentrations.

Authors:  Robin D Johnson; Joseph A Schauerte; Kathleen C Wisser; Ari Gafni; Duncan G Steel
Journal:  PLoS One       Date:  2011-08-25       Impact factor: 3.240

Review 10.  Antibodies and protein misfolding: From structural research tools to therapeutic strategies.

Authors:  Erwin De Genst; Anne Messer; Christopher M Dobson
Journal:  Biochim Biophys Acta       Date:  2014-09-04
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  2 in total

Review 1.  Deciphering the Structure and Formation of Amyloids in Neurodegenerative Diseases With Chemical Biology Tools.

Authors:  Isabelle Landrieu; Elian Dupré; Davy Sinnaeve; Léa El Hajjar; Caroline Smet-Nocca
Journal:  Front Chem       Date:  2022-05-12       Impact factor: 5.545

Review 2.  WWOX Controls Cell Survival, Immune Response and Disease Progression by pY33 to pS14 Transition to Alternate Signaling Partners.

Authors:  Tsung-Yun Liu; Ganesan Nagarajan; Ming-Fu Chiang; Shenq-Shyang Huang; Tzu-Chia Lin; Yu-An Chen; Chun-I Sze; Nan-Shan Chang
Journal:  Cells       Date:  2022-07-07       Impact factor: 7.666

  2 in total

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