Literature DB >> 33669948

Fourier Transform Infrared (FTIR) Spectroscopic Analyses of Microbiological Samples and Biogenic Selenium Nanoparticles of Microbial Origin: Sample Preparation Effects.

Alexander A Kamnev1, Yulia A Dyatlova1, Odissey A Kenzhegulov1, Anastasiya A Vladimirova1, Polina V Mamchenkova1, Anna V Tugarova1.   

Abstract

To demonstrate the importance of sample preparation used in Fourier transform infrared (FTIR) spectroscopy of microbiological materials, bacterial biomass samples with and without grinding and after different drying periods (1.5-23 h at 45 °C), as well as biogenic selenium nanoparticles (SeNPs; without washing and after one to three washing steps) were comparatively studied by transmission FTIR spectroscopy. For preparing bacterial biomass samples, Azospirillum brasilense Sp7 and A. baldaniorum Sp245 (earlier known as A. brasilense Sp245) were used. The SeNPs were obtained using A. brasilense Sp7 incubated with selenite. Grinding of the biomass samples was shown to result in slight downshifting of the bands related to cellular poly-3-hydroxybutyrate (PHB) present in the samples in small amounts (under ~10%), reflecting its partial crystallisation. Drying for 23 h was shown to give more reproducible FTIR spectra of bacterial samples. SeNPs were shown to contain capping layers of proteins, polysaccharides and lipids. The as-prepared SeNPs contained significant amounts of carboxylated components in their bioorganic capping, which appeared to be weakly bound and were largely removed after washing. Spectroscopic characteristics and changes induced by various sample preparation steps are discussed with regard to optimising sample treatment procedures for FTIR spectroscopic analyses of microbiological specimens.

Entities:  

Keywords:  Azospirillum baldaniorum; Azospirillum brasilense; FTIR spectroscopy; bacterial biomass; biogenic selenium nanoparticles; sample preparation

Mesh:

Substances:

Year:  2021        PMID: 33669948      PMCID: PMC7924863          DOI: 10.3390/molecules26041146

Source DB:  PubMed          Journal:  Molecules        ISSN: 1420-3049            Impact factor:   4.411


  37 in total

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Authors:  Jesús J Ojeda; Maria Dittrich
Journal:  Methods Mol Biol       Date:  2012

2.  Differentiation of bacterial spores via 2D-IR spectroscopy.

Authors:  Barbara Procacci; Samantha H Rutherford; Gregory M Greetham; Michael Towrie; Anthony W Parker; Camilla V Robinson; Christopher R Howle; Neil T Hunt
Journal:  Spectrochim Acta A Mol Biomol Spectrosc       Date:  2020-12-14       Impact factor: 4.098

3.  What keeps polyhydroxyalkanoates in bacterial cells amorphous? A derivation from stress exposure experiments.

Authors:  Petr Sedlacek; Eva Slaninova; Vojtech Enev; Martin Koller; Jana Nebesarova; Ivana Marova; Kamila Hrubanova; Vladislav Krzyzanek; Ota Samek; Stanislav Obruca
Journal:  Appl Microbiol Biotechnol       Date:  2019-01-08       Impact factor: 4.813

4.  FTIR and dispersive gas phase absolute infrared intensities of hydrocarbon fundamental bands.

Authors:  Leonardo J Duarte; Roy E Bruns
Journal:  Spectrochim Acta A Mol Biomol Spectrosc       Date:  2019-01-25       Impact factor: 4.098

5.  Fourier transform infrared absorption (FTIR) on dry stratum corneum, corneocyte-lipid interfaces: experimental and vibrational spectroscopy calculations.

Authors:  Erika T Sato; Neila Machado; Daniele R Araújo; Luciana C Paulino; Herculano Martinho
Journal:  Spectrochim Acta A Mol Biomol Spectrosc       Date:  2020-12-17       Impact factor: 4.098

6.  Rapid discrimination of adulteration in Radix Astragali combining diffuse reflectance mid-infrared Fourier transform spectroscopy with chemometrics.

Authors:  Jun Yang; Chunling Yin; Xu Miao; Xiangru Meng; Zhimin Liu; Leqian Hu
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Review 7.  Novel unexpected functions of PHA granules.

Authors:  Stanislav Obruca; Petr Sedlacek; Eva Slaninova; Ines Fritz; Christina Daffert; Katharina Meixner; Zuzana Sedrlova; Martin Koller
Journal:  Appl Microbiol Biotechnol       Date:  2020-04-17       Impact factor: 4.813

8.  Reduction of selenite by Azospirillum brasilense with the formation of selenium nanoparticles.

Authors:  Anna V Tugarova; Elena P Vetchinkina; Ekaterina A Loshchinina; Andrei M Burov; Valentina E Nikitina; Alexander A Kamnev
Journal:  Microb Ecol       Date:  2014-05-27       Impact factor: 4.552

9.  Selenite reduction by the rhizobacterium Azospirillum brasilense, synthesis of extracellular selenium nanoparticles and their characterisation.

Authors:  Anna V Tugarova; Polina V Mamchenkova; Vitaly A Khanadeev; Alexander A Kamnev
Journal:  N Biotechnol       Date:  2020-03-14       Impact factor: 5.079

10.  FT-IR/ATR Solid Film Formation: Qualitative and Quantitative Analysis of a Piperacillin-Tazobactam Formulation.

Authors:  Ioanna Chrisikou; Malvina Orkoula; Christos Kontoyannis
Journal:  Molecules       Date:  2020-12-21       Impact factor: 4.411

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  11 in total

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Journal:  Bioprocess Biosyst Eng       Date:  2021-10-01       Impact factor: 3.210

2.  Assessment of physiological and electrochemical effects of a repurposed zinc dithiocarbamate complex on Acinetobacter baumannii biofilms.

Authors:  Qing Yang; Kayode Olaifa; Fartisincha P Andrew; Peter A Ajibade; Obinna M Ajunwa; Enrico Marsili
Journal:  Sci Rep       Date:  2022-07-09       Impact factor: 4.996

3.  Adaptation of a Bacterial Bioluminescent Assay to Monitor Bioeffects of Gold Nanoparticles.

Authors:  Moustafa R Yehia; Tatyana E Smolyarova; Alexandr V Shabanov; Ekaterina S Sushko; Gennady A Badun; Nadezhda S Kudryasheva
Journal:  Bioengineering (Basel)       Date:  2022-02-03

4.  Evaluation of Chemical Changes in Laboratory-Induced Colistin-Resistant Klebsiella pneumoniae.

Authors:  Agata Pruss; Paweł Kwiatkowski; Łukasz Łopusiewicz; Helena Masiuk; Peter Sobolewski; Karol Fijałkowski; Monika Sienkiewicz; Adam Smolak; Stefania Giedrys-Kalemba; Barbara Dołęgowska
Journal:  Int J Mol Sci       Date:  2021-07-01       Impact factor: 5.923

5.  Antioxidant, antibacterial, and catalytic performance of biosynthesized silver nanoparticles of Rhus javanica, Rumex hastatus, and Callistemon viminalis.

Authors:  Wajheeba Khan; Naeem Khan; Nargis Jamila; Rehana Masood; Aaliya Minhaz; Farhat Amin; Amir Atlas; Umar Nishan
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6.  Chemical Fingerprinting of Heat Stress Responses in the Leaves of Common Wheat by Fourier Transform Infrared Spectroscopy.

Authors:  Salma O M Osman; Abu Sefyan I Saad; Shota Tadano; Yoshiki Takeda; Takafumi Konaka; Yuji Yamasaki; Izzat S A Tahir; Hisashi Tsujimoto; Kinya Akashi
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7.  Selenite Reduction by Proteus sp. YS02: New Insights Revealed by Comparative Transcriptomics and Antibacterial Effectiveness of the Biogenic Se0 Nanoparticles.

Authors:  Yuting Wang; Qing Ye; Yujun Sun; Yulu Jiang; Bo Meng; Jun Du; Jingjing Chen; Anna V Tugarova; Alexander A Kamnev; Shengwei Huang
Journal:  Front Microbiol       Date:  2022-03-10       Impact factor: 5.640

8.  Enhancing the Activity of Carboxymethyl Cellulase Enzyme Using Highly Stable Selenium Nanoparticles Biosynthesized by Bacillus paralicheniformis Y4.

Authors:  Yidan Wang; Yonghe Yu; Yuhua Duan; Qin Wang; Xin Cong; Yi He; Chao Gao; Muhammad Hafeez; Saad Jan; Syed Majid Rasheed; Shuiyuan Cheng; Zhangqian Wang
Journal:  Molecules       Date:  2022-07-18       Impact factor: 4.927

9.  Exopolymer-Functionalized Nanoselenium from Bacillus subtilis SR41: Characterization, Monosaccharide Analysis and Free Radical Scavenging Ability.

Authors:  Fengqin Wang; Man Du; Lixia Kai; Shuai Du; Weilian Hu; Yizhen Wang; Yuanzhi Cheng
Journal:  Polymers (Basel)       Date:  2022-08-27       Impact factor: 4.967

Review 10.  Polymer Nanocomposites of Selenium Biofabricated Using Fungi.

Authors:  Olga Tsivileva; Alexander Pozdnyakov; Anastasiya Ivanova
Journal:  Molecules       Date:  2021-06-15       Impact factor: 4.411

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