Literature DB >> 33668994

RNA Viruses in Aquatic Unicellular Eukaryotes.

Mohammadreza Sadeghi1, Yuji Tomaru2, Tero Ahola1.   

Abstract

Increasing sequence information indicates that RNA viruses constitute a major fraction of marine virus assemblages. However, only 12 RNA virus species have been described, infecting known host species of marine single-celled eukaryotes. Eight of these use diatoms as hosts, while four are resident in dinoflagellate, raphidophyte, thraustochytrid, or prasinophyte species. Most of these belong to the order Picornavirales, while two are divergent and fall into the families Alvernaviridae and Reoviridae. However, a very recent study has suggested that there is extraordinary diversity in aquatic RNA viromes, describing thousands of viruses, many of which likely use protist hosts. Thus, RNA viruses are expected to play a major ecological role for marine unicellular eukaryotic hosts. In this review, we describe in detail what has to date been discovered concerning viruses with RNA genomes that infect aquatic unicellular eukaryotes.

Entities:  

Keywords:  +ssRNA viruses; Marnaviridae; RdRp; ecology; metagenomics; protist; protist viruses; sequence diversity; viral species; virus isolation

Year:  2021        PMID: 33668994      PMCID: PMC7996518          DOI: 10.3390/v13030362

Source DB:  PubMed          Journal:  Viruses        ISSN: 1999-4915            Impact factor:   5.048


  101 in total

1.  Diversity and population structure of a near-shore marine-sediment viral community.

Authors:  Mya Breitbart; Ben Felts; Scott Kelley; Joseph M Mahaffy; James Nulton; Peter Salamon; Forest Rohwer
Journal:  Proc Biol Sci       Date:  2004-03-22       Impact factor: 5.349

2.  Isolation and characterization of a novel single-stranded RNA Virus infectious to a marine fungoid protist, Schizochytrium sp. (Thraustochytriaceae, Labyrinthulea).

Authors:  Yoshitake Takao; Keizo Nagasaki; Kazuyuki Mise; Tetsuro Okuno; Daiske Honda
Journal:  Appl Environ Microbiol       Date:  2005-08       Impact factor: 4.792

3.  Classify viruses - the gain is worth the pain.

Authors:  Jens H Kuhn; Yuri I Wolf; Mart Krupovic; Yong-Zhen Zhang; Piet Maes; Valerian V Dolja; Eugene V Koonin
Journal:  Nature       Date:  2019-02       Impact factor: 49.962

4.  Cryptic diversity in a cosmopolitan diatom known as Asterionellopsis glacialis (Fragilariaceae): Implications for ecology, biogeography, and taxonomy.

Authors:  Irena Kaczmarska; Laura Mather; Ian A Luddington; France Muise; James M Ehrman
Journal:  Am J Bot       Date:  2014-02-08       Impact factor: 3.844

5.  Exploring the microbiome of the "star" freshwater diatom Asterionella formosa in a laboratory context.

Authors:  Mila Kojadinovic-Sirinelli; Adrien Villain; Carine Puppo; Sophie Fon Sing; Laura Prioretti; Pierre Hubert; Gérald Grégori; Yizhi Zhang; Jean-François Sassi; Jean-Michel Claverie; Guillaume Blanc; Brigitte Gontero
Journal:  Environ Microbiol       Date:  2018-10-10       Impact factor: 5.491

6.  Intraspecies host specificity of a single-stranded RNA virus infecting a marine photosynthetic protist is determined at the early steps of infection.

Authors:  Hiroyuki Mizumoto; Yuji Tomaru; Yoshitake Takao; Yoko Shirai; Keizo Nagasaki
Journal:  J Virol       Date:  2006-11-15       Impact factor: 5.103

7.  Diversity of Heterotrophic Protists from Extremely Hypersaline Habitats.

Authors:  Jong Soo Park; Alastair G B Simpson
Journal:  Protist       Date:  2015-06-18

8.  Diverse responses of the bivalve-killing dinoflagellate Heterocapsa circularisquama to infection by a single-stranded RNA virus.

Authors:  Hiroyuki Mizumoto; Yuji Tomaru; Yoshitake Takao; Yoko Shirai; Keizo Nagasaki
Journal:  Appl Environ Microbiol       Date:  2008-03-21       Impact factor: 4.792

9.  Isolation and characterization of a single-stranded RNA virus infecting the marine planktonic diatom Chaetoceros tenuissimus Meunier.

Authors:  Yoko Shirai; Yuji Tomaru; Yoshitake Takao; Hidekazu Suzuki; Tamotsu Nagumo; Keizo Nagasaki
Journal:  Appl Environ Microbiol       Date:  2008-05-09       Impact factor: 4.792

Review 10.  Viral metagenomics.

Authors:  Eric L Delwart
Journal:  Rev Med Virol       Date:  2007 Mar-Apr       Impact factor: 6.989

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  6 in total

Review 1.  RNA Viruses in Aquatic Ecosystems through the Lens of Ecological Genomics and Transcriptomics.

Authors:  Sandra Kolundžija; Dong-Qiang Cheng; Federico M Lauro
Journal:  Viruses       Date:  2022-03-28       Impact factor: 5.818

2.  Viruses of Microbes 2020: The Latest Conquest on Viruses of Microbes.

Authors:  Tessa E F Quax; Marianne De Paepe; Karin Holmfeldt
Journal:  Viruses       Date:  2021-04-30       Impact factor: 5.048

3.  Thermal stress triggers productive viral infection of a key coral reef symbiont.

Authors:  Lauren I Howe-Kerr; Alex J Veglia; Carsten G B Grupstra; Reb L Bryant; Samantha R Coy; Patricia L Blackwelder; Adrienne M S Correa
Journal:  ISME J       Date:  2022-01-19       Impact factor: 11.217

4.  A High Rate Algal Pond Hosting a Dynamic Community of RNA Viruses.

Authors:  Emily E Chase; Sonia Monteil-Bouchard; Angélique Gobet; Felana H Andrianjakarivony; Christelle Desnues; Guillaume Blanc
Journal:  Viruses       Date:  2021-10-26       Impact factor: 5.048

5.  Exploring Virome Diversity in Public Data in South America as an Approach for Detecting Viral Sources From Potentially Emerging Viruses.

Authors:  Fernando G Mazur; Leandro M Morinisi; Junior Olímpio Martins; Pedro Pontes Bueno Guerra; Caio C M Freire
Journal:  Front Genet       Date:  2022-01-21       Impact factor: 4.599

6.  Picorna-Like Viruses of the Havel River, Germany.

Authors:  Roland Zell; Marco Groth; Lukas Selinka; Hans-Christoph Selinka
Journal:  Front Microbiol       Date:  2022-04-04       Impact factor: 6.064

  6 in total

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