Literature DB >> 26202993

Diversity of Heterotrophic Protists from Extremely Hypersaline Habitats.

Jong Soo Park1, Alastair G B Simpson2.   

Abstract

Heterotrophic protists (protozoa) are a diverse but understudied component of the biota of extremely hypersaline environments, with few data on molecular diversity within halophile 'species', and almost nothing known of their biogeographic distribution. We have garnered SSU rRNA gene sequences for several clades of halophilic protozoa from enrichments from waters of >12.5% salinity from Australia, North America, and Europe (6 geographic sites, 25 distinct samples). The small stramenopile Halocafeteria was found at all sites, but phylogenies did not show clear geographic clustering. The ciliate Trimyema was recorded from 6 non-European samples. Phylogenies confirmed a monophyletic halophilic Trimyema group that included possible south-eastern Australian, Western Australian and North American clusters. Several halophilic Heterolobosea were detected, demonstrating that Pleurostomum contains at least three relatively distinct clades, and increasing known continental ranges for Tulamoeba peronaphora and Euplaesiobystra hypersalinica. The unclassified flagellate Palustrimonas, found in one Australian sample, proves to be a novel deep-branching alveolate. These results are consistent with a global distribution of halophilic protozoa groups (∼ morphospecies), but the Trimyema case suggests that is worth testing whether larger forms exhibit biogeographic phylogenetic substructure. The molecular detection/characterization of halophilic protozoa is still far from complete at the clade level, let alone the 'species level'.
Copyright © 2015 Elsevier GmbH. All rights reserved.

Entities:  

Keywords:  Diversity; halophiles; microbial eukaryotes; molecular phylogeny; protozoa.

Mesh:

Substances:

Year:  2015        PMID: 26202993     DOI: 10.1016/j.protis.2015.06.001

Source DB:  PubMed          Journal:  Protist        ISSN: 1434-4610


  10 in total

1.  Kingdom Chromista and its eight phyla: a new synthesis emphasising periplastid protein targeting, cytoskeletal and periplastid evolution, and ancient divergences.

Authors:  Thomas Cavalier-Smith
Journal:  Protoplasma       Date:  2017-09-05       Impact factor: 3.356

2.  Osmoadaptative Strategy and Its Molecular Signature in Obligately Halophilic Heterotrophic Protists.

Authors:  Tommy Harding; Matthew W Brown; Alastair G B Simpson; Andrew J Roger
Journal:  Genome Biol Evol       Date:  2016-08-03       Impact factor: 3.416

3.  Adaptations to High Salt in a Halophilic Protist: Differential Expression and Gene Acquisitions through Duplications and Gene Transfers.

Authors:  Tommy Harding; Andrew J Roger; Alastair G B Simpson
Journal:  Front Microbiol       Date:  2017-05-29       Impact factor: 5.640

4.  Determining virus-host interactions and glycerol metabolism profiles in geographically diverse solar salterns with metagenomics.

Authors:  Abraham G Moller; Chun Liang
Journal:  PeerJ       Date:  2017-01-10       Impact factor: 2.984

Review 5.  Fe-S cluster assembly in the supergroup Excavata.

Authors:  Priscila Peña-Diaz; Julius Lukeš
Journal:  J Biol Inorg Chem       Date:  2018-04-05       Impact factor: 3.358

6.  First finding of free-living representatives of Prokinetoplastina and their nuclear and mitochondrial genomes.

Authors:  Denis V Tikhonenkov; Ryan M R Gawryluk; Alexander P Mylnikov; Patrick J Keeling
Journal:  Sci Rep       Date:  2021-02-03       Impact factor: 4.379

7.  Evolutionary History of Mitochondrial Genomes in Discoba, Including the Extreme Halophile Pleurostomum flabellatum (Heterolobosea).

Authors:  Khaoula Ettahi; Duckhyun Lhee; Ji Yeon Sung; Alastair G B Simpson; Jong Soo Park; Hwan Su Yoon
Journal:  Genome Biol Evol       Date:  2021-02-03       Impact factor: 3.416

Review 8.  RNA Viruses in Aquatic Unicellular Eukaryotes.

Authors:  Mohammadreza Sadeghi; Yuji Tomaru; Tero Ahola
Journal:  Viruses       Date:  2021-02-25       Impact factor: 5.048

9.  Accumulation patterns of intracellular salts in a new halophilic amoeboflagellate, Euplaesiobystra salpumilio sp. nov., (Heterolobosea; Discoba) under hypersaline conditions.

Authors:  Hyeon Been Lee; Dong Hyuk Jeong; Jong Soo Park
Journal:  Front Microbiol       Date:  2022-08-05       Impact factor: 6.064

10.  EukRef-excavates: seven curated SSU ribosomal RNA gene databases.

Authors:  Martin Kolisko; Olga Flegontova; Anna Karnkowska; Gordon Lax; Julia M Maritz; Tomáš Pánek; Petr Táborský; Jane M Carlton; Ivan Čepička; Aleš Horák; Julius Lukeš; Alastair G B Simpson; Vera Tai
Journal:  Database (Oxford)       Date:  2020-11-20       Impact factor: 3.451

  10 in total

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