Literature DB >> 33664716

Cellular and Genomic Properties of Haloferax gibbonsii LR2-5, the Host of Euryarchaeal Virus HFTV1.

Colin Tittes1, Sabine Schwarzer1, Friedhelm Pfeiffer2, Mike Dyall-Smith2,3, Marta Rodriguez-Franco4, Hanna M Oksanen5, Tessa E F Quax1.   

Abstract

Hypersaline environments are the source of many viruses infecting different species of halophilic euryarchaea. Information on infection mechanisms of archaeal viruses is scarce, due to the lack of genetically accessible virus-host models. Recently, a new archaeal siphovirus, Haloferax tailed virus 1 (HFTV1), was isolated together with its host belonging to the genus Haloferax, but it is not infectious on the widely used model euryarcheon Haloferax volcanii. To gain more insight into the biology of HFTV1 host strain LR2-5, we studied characteristics that might play a role in its virus susceptibility: growth-dependent motility, surface layer, filamentous surface structures, and cell shape. Its genome sequence showed that LR2-5 is a new strain of Haloferax gibbonsii. LR2-5 lacks obvious viral defense systems, such as CRISPR-Cas, and the composition of its cell surface is different from Hfx. volcanii, which might explain the different viral host range. This work provides first deep insights into the relationship between the host of halovirus HFTV1 and other members of the genus Haloferax. Given the close relationship to the genetically accessible Hfx. volcanii, LR2-5 has high potential as a new model for virus-host studies in euryarchaea.
Copyright © 2021 Tittes, Schwarzer, Pfeiffer, Dyall-Smith, Rodriguez-Franco, Oksanen and Quax.

Entities:  

Keywords:  N-glycosylation; S-layer; archaeal virus; archaellum; haloarchaea; type IV pili

Year:  2021        PMID: 33664716      PMCID: PMC7921747          DOI: 10.3389/fmicb.2021.625599

Source DB:  PubMed          Journal:  Front Microbiol        ISSN: 1664-302X            Impact factor:   5.640


  99 in total

1.  Harnessing the native type I-B CRISPR-Cas for genome editing in a polyploid archaeon.

Authors:  Feiyue Cheng; Luyao Gong; Dahe Zhao; Haibo Yang; Jian Zhou; Ming Li; Hua Xiang
Journal:  J Genet Genomics       Date:  2017-11-02       Impact factor: 4.275

2.  HF1 and HF2: novel bacteriophages of halophilic archaea.

Authors:  S D Nuttall; M L Dyall-Smith
Journal:  Virology       Date:  1993-12       Impact factor: 3.616

3.  Identification of Haloferax volcanii Pilin N-Glycans with Diverse Roles in Pilus Biosynthesis, Adhesion, and Microcolony Formation.

Authors:  Rianne N Esquivel; Stefan Schulze; Rachel Xu; Michael Hippler; Mechthild Pohlschroder
Journal:  J Biol Chem       Date:  2016-03-10       Impact factor: 5.157

4.  Phenotyping in the archaea: optimization of growth parameters and analysis of mutants of Haloferax volcanii.

Authors:  Katharina Jantzer; Karolin Zerulla; Jörg Soppa
Journal:  FEMS Microbiol Lett       Date:  2011-07-19       Impact factor: 2.742

5.  Archaeal type IV pili and their involvement in biofilm formation.

Authors:  Mechthild Pohlschroder; Rianne N Esquivel
Journal:  Front Microbiol       Date:  2015-03-24       Impact factor: 5.640

6.  The structure of a prokaryotic viral envelope protein expands the landscape of membrane fusion proteins.

Authors:  Kamel El Omari; Sai Li; Abhay Kotecha; Thomas S Walter; Eduardo A Bignon; Karl Harlos; Pentti Somerharju; Felix De Haas; Daniel K Clare; Mika Molin; Felipe Hurtado; Mengqiu Li; Jonathan M Grimes; Dennis H Bamford; Nicole D Tischler; Juha T Huiskonen; David I Stuart; Elina Roine
Journal:  Nat Commun       Date:  2019-02-19       Impact factor: 14.919

7.  TYGS is an automated high-throughput platform for state-of-the-art genome-based taxonomy.

Authors:  Jan P Meier-Kolthoff; Markus Göker
Journal:  Nat Commun       Date:  2019-05-16       Impact factor: 14.919

8.  Sequencing of seven haloarchaeal genomes reveals patterns of genomic flux.

Authors:  Erin A Lynch; Morgan G I Langille; Aaron Darling; Elizabeth G Wilbanks; Caitlin Haltiner; Katie S Y Shao; Michael O Starr; Clotilde Teiling; Timothy T Harkins; Robert A Edwards; Jonathan A Eisen; Marc T Facciotti
Journal:  PLoS One       Date:  2012-07-24       Impact factor: 3.240

9.  Comparative Analysis of Surface Layer Glycoproteins and Genes Involved in Protein Glycosylation in the Genus Haloferax.

Authors:  Yarden Shalev; Shannon M Soucy; R Thane Papke; J Peter Gogarten; Jerry Eichler; Uri Gophna
Journal:  Genes (Basel)       Date:  2018-03-20       Impact factor: 4.096

10.  The nuts and bolts of the Haloferax CRISPR-Cas system I-B.

Authors:  Lisa-Katharina Maier; Aris-Edda Stachler; Jutta Brendel; Britta Stoll; Susan Fischer; Karina A Haas; Thandi S Schwarz; Omer S Alkhnbashi; Kundan Sharma; Henning Urlaub; Rolf Backofen; Uri Gophna; Anita Marchfelder
Journal:  RNA Biol       Date:  2018-05-21       Impact factor: 4.652

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  3 in total

1.  Methods to Analyze Motility in Eury- and Crenarchaea.

Authors:  Megha Patro; Marleen van Wolferen; Xing Ye; Sonja-Verena Albers; Tessa E F Quax
Journal:  Methods Mol Biol       Date:  2022

2.  The Viral Susceptibility of the Haloferax Species.

Authors:  Zaloa Aguirre Sourrouille; Sabine Schwarzer; Sebastian Lequime; Hanna M Oksanen; Tessa E F Quax
Journal:  Viruses       Date:  2022-06-20       Impact factor: 5.818

3.  Open Issues for Protein Function Assignment in Haloferax volcanii and Other Halophilic Archaea.

Authors:  Friedhelm Pfeiffer; Mike Dyall-Smith
Journal:  Genes (Basel)       Date:  2021-06-24       Impact factor: 4.096

  3 in total

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