Literature DB >> 33661419

Metabolomic and elemental profiling of human tissue in kidney cancer.

Joanna Nizioł1, Valérie Copié2, Brian P Tripet2, Leonardo B Nogueira3, Katiane O P C Nogueira4, Krzysztof Ossoliński5, Adrian Arendowski6, Tomasz Ruman6.   

Abstract

INTRODUCTION: Kidney cancer is one of the most frequently diagnosed and the most lethal urinary cancer. Despite advances in treatment, no specific biomarker is currently in use to guide therapeutic interventions.
OBJECTIVES: Major aim of this work was to perform metabolomic and elemental profiling of human kidney cancer and normal tissue and to evaluate cancer biomarkers.
METHODS: Metabolic and elemental profiling of tumor and adjacent normal human kidney tissue from 50 patients with kidney cancer was undertaken using three different analytical methods.
RESULTS: Five potential tissue biomarkers of kidney cancer were identified and quantified using with high-resolution nuclear magnetic resonance spectroscopy. The contents of selected chemical elements in tissues was analyzed using inductively coupled plasma optical emission spectrometry. Eleven mass spectral features differentiating between kidney cancer and normal tissues were detected using silver-109 nanoparticle enhanced steel target laser desorption/ionization mass spectrometry.
CONCLUSIONS: Our results, derived from the combination of ICP-OES, LDI MS and 1H NMR methods, suggest that tissue biomarkers identified herein appeared to have great potential for use in clinical prognosis and/or diagnosis of kidney cancer.

Entities:  

Keywords:  Biomarkers; Cancer; Human kidney tissue; Metabolomics; Metallomics

Year:  2021        PMID: 33661419      PMCID: PMC7932981          DOI: 10.1007/s11306-021-01779-2

Source DB:  PubMed          Journal:  Metabolomics        ISSN: 1573-3882            Impact factor:   4.290


  42 in total

1.  Targeting GLUT1 and the Warburg effect in renal cell carcinoma by chemical synthetic lethality.

Authors:  Denise A Chan; Patrick D Sutphin; Phuong Nguyen; Sandra Turcotte; Edwin W Lai; Alice Banh; Gloria E Reynolds; Jen-Tsan Chi; Jason Wu; David E Solow-Cordero; Muriel Bonnet; Jack U Flanagan; Donna M Bouley; Edward E Graves; William A Denny; Michael P Hay; Amato J Giaccia
Journal:  Sci Transl Med       Date:  2011-08-03       Impact factor: 17.956

2.  Biochemical classification of kidney carcinoma biopsy samples using magic-angle-spinning 1H nuclear magnetic resonance spectroscopy.

Authors:  D Moka; R Vorreuther; H Schicha; M Spraul; E Humpfer; M Lipinski; P J Foxall; J K Nicholson; J C Lindon
Journal:  J Pharm Biomed Anal       Date:  1998-05       Impact factor: 3.935

3.  Integrated transcriptomic and metabolomic analysis shows that disturbances in metabolism of tumor cells contribute to poor survival of RCC patients.

Authors:  Piotr Popławski; Takayuki Tohge; Joanna Bogusławska; Beata Rybicka; Zbigniew Tański; Victor Treviño; Alisdair R Fernie; Agnieszka Piekiełko-Witkowska
Journal:  Biochim Biophys Acta Mol Basis Dis       Date:  2016-12-22       Impact factor: 5.187

4.  Variation in the distribution of trace elements in renal cell carcinoma.

Authors:  Fernanda Bernardes Calvo; Dário Santos Junior; Consuelo Junqueira Rodrigues; Francisco José Krug; Júlio Takehiro Marumo; Nestor Schor; Maria Helena Bellini
Journal:  Biol Trace Elem Res       Date:  2009-02-13       Impact factor: 3.738

5.  Nuclear magnetic resonance and surface-assisted laser desorption/ionization mass spectrometry-based metabolome profiling of urine samples from kidney cancer patients.

Authors:  Joanna Nizioł; Krzysztof Ossoliński; Brian P Tripet; Valérie Copié; Adrian Arendowski; Tomasz Ruman
Journal:  J Pharm Biomed Anal       Date:  2020-11-06       Impact factor: 3.935

Review 6.  Metal-induced carcinogenesis, oxidative stress and hypoxia signalling.

Authors:  Alex Galanis; Athanasios Karapetsas; Raphael Sandaltzopoulos
Journal:  Mutat Res       Date:  2008-10-30       Impact factor: 2.433

7.  Nuclear magnetic resonance and surface-assisted laser desorption/ionization mass spectrometry-based serum metabolomics of kidney cancer.

Authors:  Joanna Nizioł; Krzysztof Ossoliński; Brian P Tripet; Valérie Copié; Adrian Arendowski; Tomasz Ruman
Journal:  Anal Bioanal Chem       Date:  2020-07-13       Impact factor: 4.142

8.  The MetaCyc database of metabolic pathways and enzymes.

Authors:  Ron Caspi; Richard Billington; Carol A Fulcher; Ingrid M Keseler; Anamika Kothari; Markus Krummenacker; Mario Latendresse; Peter E Midford; Quang Ong; Wai Kit Ong; Suzanne Paley; Pallavi Subhraveti; Peter D Karp
Journal:  Nucleic Acids Res       Date:  2018-01-04       Impact factor: 16.971

9.  Creatine uptake regulates CD8 T cell antitumor immunity.

Authors:  Stefano Di Biase; Xiaoya Ma; Xi Wang; Jiaji Yu; Yu-Chen Wang; Drake J Smith; Yang Zhou; Zhe Li; Yu Jeong Kim; Nicole Clarke; Angela To; Lili Yang
Journal:  J Exp Med       Date:  2019-10-18       Impact factor: 14.307

10.  Localization of Metabolites of Human Kidney Tissue with Infrared Laser-Based Selected Reaction Monitoring Mass Spectrometry Imaging and Silver-109 Nanoparticle-Based Surface Assisted Laser Desorption/Ionization Mass Spectrometry Imaging.

Authors:  Joanna Nizioł; Jan Sunner; Iwona Beech; Krzysztof Ossoliński; Anna Ossolińska; Tadeusz Ossoliński; Aneta Płaza; Tomasz Ruman
Journal:  Anal Chem       Date:  2020-02-28       Impact factor: 6.986

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  2 in total

1.  Identification of HGD and GSTZ1 as Biomarkers Involved Metabolic Reprogramming in Kidney Renal Clear Cell Carcinoma.

Authors:  Jiyan Wang; Hongkai Chang; Meng Su; Yaya Qiao; Huanran Sun; Yongshan Zhao; Shuai Zhang; Changliang Shan
Journal:  Int J Mol Sci       Date:  2022-04-21       Impact factor: 5.923

2.  GC-TOF/MS-Based Metabolomics for Comparison of Volar and Non-Volar Skin Types.

Authors:  Ting Bu; Ming Zhang; Sun-Hee Lee; Yu Eun Cheong; Yukyung Park; Kyoung Heon Kim; Dongwon Kim; Sooah Kim
Journal:  Metabolites       Date:  2022-08-03
  2 in total

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