Literature DB >> 33660919

A remote undergraduate biology seminar on SARS-CoV-2 literature.

Alessandra C Leri1.   

Abstract

At our small liberal arts college, we require undergraduates majoring in Biology and Biomedical Sciences to take a seminar in the spring of their senior year. Each year, the seminar focuses on a different topic in molecular biology and/or biochemistry. The course operates as a "journal club"-every week, a student presents a peer-reviewed research article, and the instructor moderates a discussion. When the transition to remote learning occurred due to the COVID-19 pandemic in March 2020, the seminar meetings were moved online to a Zoom-based platform, and the course topic was changed to focus on emerging research regarding the novel coronavirus. The continuation of the Biology senior seminar in a remote context was straightforward, and the SARS-CoV-2 virus furnished a rich theme for exploration of diverse topics in molecular biology and genetics.
© 2021 International Union of Biochemistry and Molecular Biology.

Entities:  

Keywords:  COVID-19; active learning; biology seminar; biotechnology education; curriculum design; distance learning; integration of research into undergraduate teaching; journal club; learning and Web-based learning; remote learning

Mesh:

Year:  2021        PMID: 33660919      PMCID: PMC8013813          DOI: 10.1002/bmb.21503

Source DB:  PubMed          Journal:  Biochem Mol Biol Educ        ISSN: 1470-8175            Impact factor:   1.369


At the undergraduate level, “journal club”‐style seminars provide an optimal venue to introduce students to primary literature, giving them critical experience in reading, analyzing, and explaining peer‐reviewed research reports. Journal clubs have a long history in biology education, having originated in medical schools in the early 20th century. At the undergraduate level, journal clubs have been implemented as an active learning strategy to enhance students' skills in scientific communication by training them to read, understand, and present scientific journal articles. , For the last decade, we have required that all senior Biology majors at our small liberal arts college complete a one‐credit senior seminar that functions like a journal club. The course familiarizes students with the process of reading and interpreting primary literature from various subfields of biology, including biochemistry, protein/macromolecular structure, cellular and molecular biology, microbiology, and evolutionary biology. Each week, a student delivers an oral presentation on a pre‐selected article, after which the instructor moderates a discussion. This student‐centered active learning approach enhances undergraduates' skills in science communication and fosters the use of research strategies to address scientific questions. Every year, the seminar focuses on a different topic. Past topics have included precision medicine and immunotherapy as cancer treatments. At the beginning of this past semester in January 2020, we began senior seminar with a focus on the role of metals in biological systems. When the COVID‐19 pandemic forced the transition to distance learning in mid‐March 2020, we implemented two key changes: (1) our weekly 90‐min seminar began meeting through Zoom rather than in person, with presentations delivered via screen sharing; and (2) our course theme was changed to focus on the latest scientific research related to the new coronavirus, SARS‐CoV‐2. Course materials, readings, and assignments continued to be distributed, submitted, and graded via the Blackboard content management system. The transition proved smooth, as students adapted quickly to virtual presentations via screen‐sharing on the Zoom platform. Because the senior seminar was being taught as the pandemic unfolded, articles were chosen week‐to‐week as new research was published, resulting in a highly topical and diverse reading list (Table 1). The focus on papers covering different aspects of SARS‐CoV‐2 allowed us to explore a variety of topics in molecular biology, genetics, and biotechnology. Papers ranged from highly technical genomic analyses to more applied clinical case reports, a broad sampling of topics suitable for a group of senior Biology majors with varied interests and ambitions, many of them aspiring to medicine.
TABLE 1

Peer‐reviewed research articles on SARS‐CoV‐2 and associated topics

Week after transition to remote learning in March 2020Peer‐reviewed journal article presented (with references)Foundational topics addressed
1 (3/26) A new coronavirus associated with human respiratory disease in China 4 Phylogenetic analysis, RNA sequencing, genetic recombination, protein structure and function, viral infection
2 (4/2) Characteristics of pediatric SARS‐CoV‐2 infection and potential evidence for persistent fecal viral shedding 5 Epidemiology, clinical aspects of COVID‐19 infection, human physiology, pediatric medicine, RT‐PCR testing
3 (4/16) The proximal origin of SARS‐CoV‐2 6 Computational biology, bioinformatics, molecular evolution, protein structure and function
4 (4/23) Microneedle array delivered recombinant coronavirus vaccines: Immunogenicity and rapid translational development 7 Immunogenicity, vaccine design, antibody response, RNA translation, biotechnology, protein structure and function
5 (4/30) SARS‐CoV‐2 cell entry depends on ACE2 and TMPRSS2 and is blocked by a clinically proven protease inhibitor 8 Phylogenetic analysis, viral infection, antibody response, protein structure and function
6 (5/7) Clinical characteristics and intrauterine vertical transmission potential of COVID‐19 infection in nine pregnant women: A retrospective review of medical records 9 Epidemiology, clinical aspects of COVID‐19 infection, human physiology, reproductive medicine, medical imaging and radiology
7 (5/14) A human monoclonal antibody blocking SARS‐CoV‐2 infection 10 Immunotherapy, viral infection, antibody response, genetic engineering, transgenesis, biotechnology, protein structure and function
Peer‐reviewed research articles on SARS‐CoV‐2 and associated topics Dialectical tools and assignments have been shown to improve class participation and discussion in journal club courses. To ensure that all students read and understood the journal articles prior to class, the instructor assigned detailed discussion questions focusing on the key points of the paper, including methods, data analysis and interpretation, and big‐picture takeaways (discussion questions for each article listed in Table 1 can be found in the Data S1). This led to animated and profound discussions, particularly with regard to the development of COVID‐19 therapies and vaccines. Students often commented that they found the discussions “empowering,” a particularly meaningful outcome given the fear and apprehension felt by so many as a result of the pandemic. We opened to the course to the rest of the college community and publicized it using the hashtag “#knowledgeispower” on our Instagram site (@mmcbiology). During the 7 weeks of remote learning, our Zoom sessions hosted a multitude of guest observers, including faculty from other departments, students, family members, and alumni. The final course grade was calculated from presentations (70%), discussion questions (15%), and attendance/participation (15%). In the instructor's view, this assessment did not give sufficient weight to the time‐consuming discussion question homework; future iterations of the course will alter the ratio to 60%, 25%, and 15%, respectively. In anonymous surveys, students offered positive comments regarding the learning effectiveness of the seminar and its focus on COVID‐19 (Table 2). On a 5‐point Likert scale, all respondents strongly agreed (75%) or agreed (25%) with the statement, “This course was effective in teaching me how to read scientific journal articles.” All respondents strongly agreed (50%) or agreed (50%) with the statement, “This course worked effectively as a remote, Zoom‐based seminar.” All respondents strongly agreed (100%) with the statements, “This course increased my understanding of the novel coronavirus,” and “This course helped me apply the knowledge I have gained while earning my Biology degree.” They unanimously rated the learning effectiveness of the seminar 5 out of 5 points.
TABLE 2

Student comments regarding the Seminar's focus on COVID‐19

“I felt that senior seminar was redirected accordingly and allowed for us to explore research articles that were current and very relevant to all of our lives. I definitely do think it would be an interesting approach to focus on the virus next semester as well as we all know that research and information concerning the novel coronavirus is constantly increasing and changing.”
“Allowed me to stay informed and educated about COVID‐19, as well as encouraged me to properly educate others.”
“Really enjoyed studying COVID‐19 and learning more about it, I felt more informed than most of my friends and family.”
“Loved all the content and the papers. Got an understanding of the virus in almost every important field. I definitely feel I can read any literature paper about the virus and have an understanding.”
Student comments regarding the Seminar's focus on COVID‐19 The survey results indicate that this remotely taught, COVID‐focused senior seminar successfully achieved its learning goals, allowing the students to employ foundational knowledge from their undergraduate biology coursework to read, analyze, and explain peer‐reviewed research articles. Overall, the pandemic forced a fruitful test of active learning in a remote context and also provided a highly topical theme that promoted extraordinary student interest and engagement. Data S1. Supporting Information. Click here for additional data file.
  12 in total

1.  A human monoclonal antibody blocking SARS-CoV-2 infection.

Authors:  Chunyan Wang; Wentao Li; Dubravka Drabek; Nisreen M A Okba; Rien van Haperen; Albert D M E Osterhaus; Frank J M van Kuppeveld; Bart L Haagmans; Frank Grosveld; Berend-Jan Bosch
Journal:  Nat Commun       Date:  2020-05-04       Impact factor: 14.919

2.  Improving journal club: increasing student discussion and understanding of primary literature in molecular biology through the use of dialectical notes.

Authors:  Virginia McDonough
Journal:  Biochem Mol Biol Educ       Date:  2012-09-05       Impact factor: 1.160

3.  The journal club and medical education: over one hundred years of unrecorded history.

Authors:  M Linzer
Journal:  Postgrad Med J       Date:  1987-06       Impact factor: 2.401

4.  Undergraduate journal club as an intervention to improve student development in applying the scientific process.

Authors:  Conner I Sandefur; Claire Gordy
Journal:  J Coll Sci Teach       Date:  2016-03

5.  A new coronavirus associated with human respiratory disease in China.

Authors:  Fan Wu; Su Zhao; Bin Yu; Yan-Mei Chen; Wen Wang; Zhi-Gang Song; Yi Hu; Zhao-Wu Tao; Jun-Hua Tian; Yuan-Yuan Pei; Ming-Li Yuan; Yu-Ling Zhang; Fa-Hui Dai; Yi Liu; Qi-Min Wang; Jiao-Jiao Zheng; Lin Xu; Edward C Holmes; Yong-Zhen Zhang
Journal:  Nature       Date:  2020-02-03       Impact factor: 49.962

6.  Clinical characteristics and intrauterine vertical transmission potential of COVID-19 infection in nine pregnant women: a retrospective review of medical records.

Authors:  Huijun Chen; Juanjuan Guo; Chen Wang; Fan Luo; Xuechen Yu; Wei Zhang; Jiafu Li; Dongchi Zhao; Dan Xu; Qing Gong; Jing Liao; Huixia Yang; Wei Hou; Yuanzhen Zhang
Journal:  Lancet       Date:  2020-02-12       Impact factor: 79.321

7.  Impact of the COVID-19 Pandemic on Mental Health and Quality of Life among Local Residents in Liaoning Province, China: A Cross-Sectional Study.

Authors:  Yingfei Zhang; Zheng Feei Ma
Journal:  Int J Environ Res Public Health       Date:  2020-03-31       Impact factor: 3.390

8.  SARS-CoV-2 Cell Entry Depends on ACE2 and TMPRSS2 and Is Blocked by a Clinically Proven Protease Inhibitor.

Authors:  Markus Hoffmann; Hannah Kleine-Weber; Simon Schroeder; Nadine Krüger; Tanja Herrler; Sandra Erichsen; Tobias S Schiergens; Georg Herrler; Nai-Huei Wu; Andreas Nitsche; Marcel A Müller; Christian Drosten; Stefan Pöhlmann
Journal:  Cell       Date:  2020-03-05       Impact factor: 41.582

9.  Microneedle array delivered recombinant coronavirus vaccines: Immunogenicity and rapid translational development.

Authors:  Eun Kim; Geza Erdos; Shaohua Huang; Thomas W Kenniston; Stephen C Balmert; Cara Donahue Carey; V Stalin Raj; Michael W Epperly; William B Klimstra; Bart L Haagmans; Emrullah Korkmaz; Louis D Falo; Andrea Gambotto
Journal:  EBioMedicine       Date:  2020-04-02       Impact factor: 8.143

10.  The proximal origin of SARS-CoV-2.

Authors:  Kristian G Andersen; Andrew Rambaut; W Ian Lipkin; Edward C Holmes; Robert F Garry
Journal:  Nat Med       Date:  2020-04       Impact factor: 87.241

View more
  2 in total

1.  A remote undergraduate biology seminar on SARS-CoV-2 literature.

Authors:  Alessandra C Leri
Journal:  Biochem Mol Biol Educ       Date:  2021-03-04       Impact factor: 1.369

2.  Perception of journal club seminars by medical doctoral students: results from five years of evaluation.

Authors:  Mara Taverna; Julian Nicolaus Bucher; Maximilian Weniger; Roswitha Gropp; Serene M L Lee; Barbara Mayer; Jens Werner; Alexandr V Bazhin
Journal:  GMS J Med Educ       Date:  2022-02-15
  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.