Literature DB >> 33659322

Single Cell Volume Measurement Utilizing the Fluorescence Exclusion Method (FXm).

Nash D Rochman1, Kai Yao2, Nicolas Perez A Gonzalez1, Denis Wirtz1,3, Sean X Sun1,2,3.   

Abstract

The measurement of single cell size remains an obstacle towards a deeper understanding of cell growth control, tissue homeostasis, organogenesis, and a wide range of pathologies. Recent advances have placed a spotlight on the importance of cell volume in the regulation of fundamental cell signaling pathways including those known to orchestrate progression through the cell cycle. Here we provide our protocol for the Fluorescence Exclusion Method (FXm); references to the development of FXm; and a brief outlook on future advances in image analysis which may expand the range of problems studied utilizing FXm as well as lower the barrier to entry for groups interested in adding cell volume measurements into their experimental repertoire.
Copyright © 2020 The Authors; exclusive licensee Bio-protocol LLC.

Entities:  

Keywords:  Cell mechanics; Epifluorescence microscopy; Image analysis; Microfluidics; Neural networks; Single cell

Year:  2020        PMID: 33659322      PMCID: PMC7842389          DOI: 10.21769/BioProtoc.3652

Source DB:  PubMed          Journal:  Bio Protoc        ISSN: 2331-8325


  12 in total

1.  Dynamic measurement of the height and volume of migrating cells by a novel fluorescence microscopy technique.

Authors:  Céline Bottier; Chiara Gabella; Benoît Vianay; Lara Buscemi; Ivo F Sbalzarini; Jean-Jacques Meister; Alexander B Verkhovsky
Journal:  Lab Chip       Date:  2011-10-03       Impact factor: 6.799

2.  Active Biochemical Regulation of Cell Volume and a Simple Model of Cell Tension Response.

Authors:  Jiaxiang Tao; Sean X Sun
Journal:  Biophys J       Date:  2015-10-20       Impact factor: 4.033

Review 3.  Traction force microscopy in physics and biology.

Authors:  Robert W Style; Rostislav Boltyanskiy; Guy K German; Callen Hyland; Christopher W MacMinn; Aaron F Mertz; Larry A Wilen; Ye Xu; Eric R Dufresne
Journal:  Soft Matter       Date:  2014-06-21       Impact factor: 3.679

4.  A new method for cell volume measurement based on volume exclusion of a fluorescent dye.

Authors:  M L Gray; R A Hoffman; W P Hansen
Journal:  Cytometry       Date:  1983-05

5.  High refractive index silicone gels for simultaneous total internal reflection fluorescence and traction force microscopy of adherent cells.

Authors:  Edgar Gutierrez; Eugene Tkachenko; Achim Besser; Prithu Sundd; Klaus Ley; Gaudenz Danuser; Mark H Ginsberg; Alex Groisman
Journal:  PLoS One       Date:  2011-09-22       Impact factor: 3.240

6.  Cell tension and mechanical regulation of cell volume.

Authors:  Nicolas Perez Gonzalez; Jiaxiang Tao; Nash D Rochman; Dhruv Vig; Evelyn Chiu; Denis Wirtz; Sean X Sun
Journal:  Mol Biol Cell       Date:  2018-08-16       Impact factor: 4.138

7.  Size control in mammalian cells involves modulation of both growth rate and cell cycle duration.

Authors:  Clotilde Cadart; Sylvain Monnier; Jacopo Grilli; Pablo J Sáez; Nishit Srivastava; Rafaele Attia; Emmanuel Terriac; Buzz Baum; Marco Cosentino-Lagomarsino; Matthieu Piel
Journal:  Nat Commun       Date:  2018-08-16       Impact factor: 14.919

8.  YAP and TAZ regulate cell volume.

Authors:  Nicolas A Perez-Gonzalez; Nash D Rochman; Kai Yao; Jiaxiang Tao; Minh-Tam Tran Le; Shannon Flanary; Lucia Sablich; Ben Toler; Eliana Crentsil; Felipe Takaesu; Bram Lambrus; Jessie Huang; Vivian Fu; Pragati Chengappa; Tia M Jones; Andrew J Holland; Steven An; Denis Wirtz; Ryan J Petrie; Kun-Liang Guan; Sean X Sun
Journal:  J Cell Biol       Date:  2019-09-03       Impact factor: 10.539

9.  CTRL - a label-free artificial intelligence method for dynamic measurement of single-cell volume.

Authors:  Kai Yao; Nash D Rochman; Sean X Sun
Journal:  J Cell Sci       Date:  2020-04-14       Impact factor: 5.285

10.  Confocal reference free traction force microscopy.

Authors:  Martin Bergert; Tobias Lendenmann; Manuel Zündel; Alexander E Ehret; Daniele Panozzo; Patrizia Richner; David K Kim; Stephan J P Kress; David J Norris; Olga Sorkine-Hornung; Edoardo Mazza; Dimos Poulikakos; Aldo Ferrari
Journal:  Nat Commun       Date:  2016-09-29       Impact factor: 14.919

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  1 in total

1.  Physics and Physiology of Cell Spreading in Two and Three Dimensions.

Authors:  Paul A Janmey; Boris Hinz; Christopher A McCulloch
Journal:  Physiology (Bethesda)       Date:  2021-11-01
  1 in total

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