Literature DB >> 33655229

COVID-19 drug practices risk antimicrobial resistance evolution.

Ebrahim Afshinnekoo1,2, Chandrima Bhattacharya1,2, Ana Burguete-García3, Eduardo Castro-Nallar4, Youping Deng5, Christelle Desnues6, Emmanuel Dias-Neto7, Eran Elhaik8, Gregorio Iraola9, Soojin Jang10, Paweł P Łabaj11, Christopher E Mason1,2,12, Niranjan Nagarajan13, Michael Poulsen14, Bharath Prithiviraj15, Rania Siam16,17, Tieliu Shi18, Haruo Suzuki19, Johannes Werner20, Maria Mercedes Zambrano21, Malay Bhattacharyya22.   

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Year:  2021        PMID: 33655229      PMCID: PMC7906697          DOI: 10.1016/S2666-5247(21)00039-2

Source DB:  PubMed          Journal:  Lancet Microbe        ISSN: 2666-5247


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Antimicrobial resistance is one of the biggest challenges facing modern medicine. Because the management of COVID-19 is increasingly becoming dependent on pharmacological interventions, there is greater risk for accelerating the evolution and spread of antimicrobial resistance. A study in a tertiary hospital environment revealed concerning colonisation patterns of microbes during extended periods. It also highlighted the diversity of antimicrobial resistance gene reservoirs in hospitals that could facilitate the emergence and transmission of new modes of antibiotic resistance. Admission and release of patients from tertiary hospitals have risen dramatically in the past year due to the COVID-19 pandemic, with many hospitals expanding beyond capacity. With hospitalisations exceeding normal capacity due to COVID-19 combined with impaired immune function in patients, risks of co-infections have substantially increased.2, 3 The gap in a comprehensive understanding of co-infection and comorbidity caused by COVID-19 has led to rapidly changing protocols for patient handling, including administering multiple drugs around the world (figure ). The use of antiparasite, antiviral, antibacterial, and anti-inflammatory drugs for preventing secondary infections in patients with COVID-19 during a prolonged pandemic will inevitably invite future complications, including aggravation of antimicrobial resistance. This is particularly relevant in light of the successive emergence of mutations that increase SARS-CoV-2 fitness, which could be responsible for recurrent COVID-19 waves. Of note, because most of these drugs are used for other target pathogens, we might not only increase resistance in COVID-19 but also face challenges in the treatment of other bacterial and viral infections.
Figure

Use of multiple COVID-19 drugs in practice

Timeline of first appearance of major antiparasite, antiviral, antibacterial, and anti-inflammatory drugs for the treatment of COVID-19 in preprints, in a peer-reviewed article, as a Google search trend, as a worldwide Twitter trend, and the first time mentioned by WHO in situation reports. The other essential drugs for supportive care were first mentioned by WHO on April 14, 2020, as a part of the COVID-19 Essential Supplies Forecasting Tool.

Use of multiple COVID-19 drugs in practice Timeline of first appearance of major antiparasite, antiviral, antibacterial, and anti-inflammatory drugs for the treatment of COVID-19 in preprints, in a peer-reviewed article, as a Google search trend, as a worldwide Twitter trend, and the first time mentioned by WHO in situation reports. The other essential drugs for supportive care were first mentioned by WHO on April 14, 2020, as a part of the COVID-19 Essential Supplies Forecasting Tool. With drugs frequently replaced by new therapeutic options (figure), the fear of increased antimicrobial resistance evolution and spread are a reality. There was an increasing demand for and misuse of various drugs in the treatment of COVID-19 irrespective of paucity of scientific evidence. This has even been exacerbated by rapid publication of some papers without extensive peer-review and their recommendations by WHO and the centres for disease control and prevention across the world without evaluations. Social media has also played an alarming role in increasing the popularity (both negative and positive) of some drugs, including a number of pharmacological substances with no proven effects. As an additional threat, imperfect drug penetration to patients with COVID-19 might lead to rapid evolution of multidrug resistance. This might be worsened by alterations observed in the gut microbiota of patients hospitalised with COVID-19, which represents a propitious dysbiotic environment for the emergence and dissemination of multidrug resistance. Nosocomial transmission of SARS-CoV-2 from patients to health-care workers was reported at the Wuhan Union Hospital, Wuhan, China, as early as Jan 16, 2020. However, investigations on accompanying multidrug-resistant infections have not been done in these and other studies. This is of note because there is substantial push towards administration of convalescent plasma therapy as a COVID-19 treatment option on the basis of success reported during previous global outbreaks, such as severe acute respiratory syndrome, Middle East respiratory syndrome, and H1N1 Influenza. We must be vigilant and cautious that the fight against COVID-19 does not invite another significant threat to humankind.
  9 in total

1.  Imperfect drug penetration leads to spatial monotherapy and rapid evolution of multidrug resistance.

Authors:  Stefany Moreno-Gamez; Alison L Hill; Daniel I S Rosenbloom; Dmitri A Petrov; Martin A Nowak; Pleuni S Pennings
Journal:  Proc Natl Acad Sci U S A       Date:  2015-05-18       Impact factor: 11.205

2.  Effectiveness of convalescent plasma therapy in severe COVID-19 patients.

Authors:  Kai Duan; Bende Liu; Cesheng Li; Huajun Zhang; Ting Yu; Jieming Qu; Min Zhou; Li Chen; Shengli Meng; Yong Hu; Cheng Peng; Mingchao Yuan; Jinyan Huang; Zejun Wang; Jianhong Yu; Xiaoxiao Gao; Dan Wang; Xiaoqi Yu; Li Li; Jiayou Zhang; Xiao Wu; Bei Li; Yanping Xu; Wei Chen; Yan Peng; Yeqin Hu; Lianzhen Lin; Xuefei Liu; Shihe Huang; Zhijun Zhou; Lianghao Zhang; Yue Wang; Zhi Zhang; Kun Deng; Zhiwu Xia; Qin Gong; Wei Zhang; Xiaobei Zheng; Ying Liu; Huichuan Yang; Dongbo Zhou; Ding Yu; Jifeng Hou; Zhengli Shi; Saijuan Chen; Zhu Chen; Xinxin Zhang; Xiaoming Yang
Journal:  Proc Natl Acad Sci U S A       Date:  2020-04-06       Impact factor: 11.205

3.  Nosocomial outbreak of COVID-19 pneumonia in Wuhan, China.

Authors:  Xiaorong Wang; Qiong Zhou; Yukun He; Lingbo Liu; Xinqian Ma; Xiaoshan Wei; Nanchuan Jiang; Limei Liang; Yali Zheng; Ling Ma; Yu Xu; Dong Yang; Jianchu Zhang; Bohan Yang; Ning Jiang; Tao Deng; Bingbing Zhai; Yang Gao; Wenxuan Liu; Xinghua Bai; Tao Pan; Guoqing Wang; Yujun Chang; Zhi Zhang; Huanzhong Shi; Wan-Li Ma; Zhancheng Gao
Journal:  Eur Respir J       Date:  2020-06-04       Impact factor: 16.671

4.  Co-infections: testing macrolides for added benefit in patients with COVID-19.

Authors:  Katharina Anna Sterenczak; Israel Barrantes; Thomas Stahnke; Oliver Stachs; Georg Fuellen; Nasrullah Undre
Journal:  Lancet Microbe       Date:  2020-11-02

5.  Co-infections: potentially lethal and unexplored in COVID-19.

Authors:  Michael J Cox; Nicholas Loman; Debby Bogaert; Justin O'Grady
Journal:  Lancet Microbe       Date:  2020-04-24

6.  The Impact of the COVID-19 "Infodemic" on Drug-Utilization Behaviors: Implications for Pharmacovigilance.

Authors:  Marco Tuccori; Irma Convertino; Sara Ferraro; Emiliano Cappello; Giulia Valdiserra; Daniele Focosi; Corrado Blandizzi
Journal:  Drug Saf       Date:  2020-08       Impact factor: 5.228

7.  Alterations in Gut Microbiota of Patients With COVID-19 During Time of Hospitalization.

Authors:  Tao Zuo; Fen Zhang; Grace C Y Lui; Yun Kit Yeoh; Amy Y L Li; Hui Zhan; Yating Wan; Arthur C K Chung; Chun Pan Cheung; Nan Chen; Christopher K C Lai; Zigui Chen; Eugene Y K Tso; Kitty S C Fung; Veronica Chan; Lowell Ling; Gavin Joynt; David S C Hui; Francis K L Chan; Paul K S Chan; Siew C Ng
Journal:  Gastroenterology       Date:  2020-05-20       Impact factor: 33.883

8.  Tracking Changes in SARS-CoV-2 Spike: Evidence that D614G Increases Infectivity of the COVID-19 Virus.

Authors:  Bette Korber; Will M Fischer; Sandrasegaram Gnanakaran; Hyejin Yoon; James Theiler; Werner Abfalterer; Nick Hengartner; Elena E Giorgi; Tanmoy Bhattacharya; Brian Foley; Kathryn M Hastie; Matthew D Parker; David G Partridge; Cariad M Evans; Timothy M Freeman; Thushan I de Silva; Charlene McDanal; Lautaro G Perez; Haili Tang; Alex Moon-Walker; Sean P Whelan; Celia C LaBranche; Erica O Saphire; David C Montefiori
Journal:  Cell       Date:  2020-07-03       Impact factor: 66.850

9.  Cartography of opportunistic pathogens and antibiotic resistance genes in a tertiary hospital environment.

Authors:  Kern Rei Chng; Chenhao Li; Denis Bertrand; Amanda Hui Qi Ng; Junmei Samantha Kwah; Hwee Meng Low; Chengxuan Tong; Maanasa Natrajan; Michael Hongjie Zhang; Licheng Xu; Karrie Kwan Ki Ko; Eliza Xin Pei Ho; Tamar V Av-Shalom; Jeanette Woon Pei Teo; Chiea Chuen Khor; Swaine L Chen; Christopher E Mason; Oon Tek Ng; Kalisvar Marimuthu; Brenda Ang; Niranjan Nagarajan
Journal:  Nat Med       Date:  2020-06-08       Impact factor: 53.440

  9 in total
  15 in total

1.  Impact of the COVID-19 Pandemic on Inpatient Antibiotic Consumption in Switzerland.

Authors:  Olivier Friedli; Michael Gasser; Alexia Cusini; Rosamaria Fulchini; Danielle Vuichard-Gysin; Roswitha Halder Tobler; Nasstasja Wassilew; Catherine Plüss-Suard; Andreas Kronenberg
Journal:  Antibiotics (Basel)       Date:  2022-06-11

Review 2.  Application of Artificial Intelligence in Combating High Antimicrobial Resistance Rates.

Authors:  Ali A Rabaan; Saad Alhumaid; Abbas Al Mutair; Mohammed Garout; Yem Abulhamayel; Muhammad A Halwani; Jeehan H Alestad; Ali Al Bshabshe; Tarek Sulaiman; Meshal K AlFonaisan; Tariq Almusawi; Hawra Albayat; Mohammed Alsaeed; Mubarak Alfaresi; Sultan Alotaibi; Yousef N Alhashem; Mohamad-Hani Temsah; Urooj Ali; Naveed Ahmed
Journal:  Antibiotics (Basel)       Date:  2022-06-08

3.  In-vitro susceptibility testing methods for the combination of ceftazidime-avibactam with aztreonam in metallobeta-lactamase producing organisms: Role of combination drugs in antibiotic resistance era.

Authors:  Priya Sreenivasan; Bhawna Sharma; Satinder Kaur; Sudesh Rana; Manisha Biswal; Pallab Ray; Archana Angrup
Journal:  J Antibiot (Tokyo)       Date:  2022-06-17       Impact factor: 3.424

Review 4.  Loop-Mediated Isothermal Amplification Detection of SARS-CoV-2 and Myriad Other Applications.

Authors:  Keith J M Moore; Jeremy Cahill; Guy Aidelberg; Rachel Aronoff; Ali Bektaş; Daniela Bezdan; Daniel J Butler; Sridar V Chittur; Martin Codyre; Fernan Federici; Nathan A Tanner; Scott W Tighe; Randy True; Sarah B Ware; Anne L Wyllie; Evan E Afshin; Andres Bendesky; Connie B Chang; Richard Dela Rosa; Eran Elhaik; David Erickson; Andrew S Goldsborough; George Grills; Kathrin Hadasch; Andrew Hayden; Seong-Young Her; Julie A Karl; Chang Hee Kim; Alison J Kriegel; Thomas Kunstman; Zeph Landau; Kevin Land; Bradley W Langhorst; Ariel B Lindner; Benjamin E Mayer; Lee A McLaughlin; Matthew T McLaughlin; Jenny Molloy; Christopher Mozsary; Jerry L Nadler; Melinee D'Silva; David Ng; David H O'Connor; Jerry E Ongerth; Olayinka Osuolale; Ana Pinharanda; Dennis Plenker; Ravi Ranjan; Michael Rosbash; Assaf Rotem; Jacob Segarra; Stephan Schürer; Scott Sherrill-Mix; Helena Solo-Gabriele; Shaina To; Merly C Vogt; Albert D Yu; Christopher E Mason
Journal:  J Biomol Tech       Date:  2021-09

5.  Assessment of novel technologies in healthcare - off-label use of drugs and the ethics of implementation and distribution of COVID-19 vaccines.

Authors:  Vivian Iida Avelino-Silva; Mario Thadeu Leme de Barros Filho
Journal:  Einstein (Sao Paulo)       Date:  2022-01-05

Review 6.  An overview on the current available treatment for COVID-19 and the impact of antibiotic administration during the pandemic.

Authors:  H S C Paula; S B Santiago; L A Araújo; C F Pedroso; T A Marinho; I A J Gonçalves; T A P Santos; R S Pinheiro; G A Oliveira; K A Batista
Journal:  Braz J Med Biol Res       Date:  2021-12-10       Impact factor: 2.590

7.  Amide Moieties Modulate the Antimicrobial Activities of Conjugated Oligoelectrolytes against Gram-negative Bacteria.

Authors:  Jakkarin Limwongyut; Alex S Moreland; Chenyao Nie; Javier Read de Alaniz; Guillermo C Bazan
Journal:  ChemistryOpen       Date:  2022-02       Impact factor: 2.630

8.  The nature, cause and consequence of COVID-19 panic among social media users in India.

Authors:  Chandrima Bhattacharya; Debaroti Chowdhury; Nova Ahmed; Su Özgür; Bodhisatwa Bhattacharya; Sankar Kumar Mridha; Malay Bhattacharyya
Journal:  Soc Netw Anal Min       Date:  2021-06-08

Review 9.  Review on Multiple Facets of Drug Resistance: A Rising Challenge in the 21st Century.

Authors:  Mousumi Saha; Agniswar Sarkar
Journal:  J Xenobiot       Date:  2021-12-13

10.  A global metagenomic map of urban microbiomes and antimicrobial resistance.

Authors:  David Danko; Daniela Bezdan; Evan E Afshin; Sofia Ahsanuddin; Chandrima Bhattacharya; Daniel J Butler; Kern Rei Chng; Daisy Donnellan; Jochen Hecht; Katelyn Jackson; Katerina Kuchin; Mikhail Karasikov; Abigail Lyons; Lauren Mak; Dmitry Meleshko; Harun Mustafa; Beth Mutai; Russell Y Neches; Amanda Ng; Olga Nikolayeva; Tatyana Nikolayeva; Eileen Png; Krista A Ryon; Jorge L Sanchez; Heba Shaaban; Maria A Sierra; Dominique Thomas; Ben Young; Omar O Abudayyeh; Josue Alicea; Malay Bhattacharyya; Ran Blekhman; Eduardo Castro-Nallar; Ana M Cañas; Aspassia D Chatziefthimiou; Robert W Crawford; Francesca De Filippis; Youping Deng; Christelle Desnues; Emmanuel Dias-Neto; Marius Dybwad; Eran Elhaik; Danilo Ercolini; Alina Frolova; Dennis Gankin; Jonathan S Gootenberg; Alexandra B Graf; David C Green; Iman Hajirasouliha; Jaden J A Hastings; Mark Hernandez; Gregorio Iraola; Soojin Jang; Andre Kahles; Frank J Kelly; Kaymisha Knights; Nikos C Kyrpides; Paweł P Łabaj; Patrick K H Lee; Marcus H Y Leung; Per O Ljungdahl; Gabriella Mason-Buck; Ken McGrath; Cem Meydan; Emmanuel F Mongodin; Milton Ozorio Moraes; Niranjan Nagarajan; Marina Nieto-Caballero; Houtan Noushmehr; Manuela Oliveira; Stephan Ossowski; Olayinka O Osuolale; Orhan Özcan; David Paez-Espino; Nicolás Rascovan; Hugues Richard; Gunnar Rätsch; Lynn M Schriml; Torsten Semmler; Osman U Sezerman; Leming Shi; Tieliu Shi; Rania Siam; Le Huu Song; Haruo Suzuki; Denise Syndercombe Court; Scott W Tighe; Xinzhao Tong; Klas I Udekwu; Juan A Ugalde; Brandon Valentine; Dimitar I Vassilev; Elena M Vayndorf; Thirumalaisamy P Velavan; Jun Wu; María M Zambrano; Jifeng Zhu; Sibo Zhu; Christopher E Mason
Journal:  Cell       Date:  2021-05-26       Impact factor: 41.582

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