Literature DB >> 33654827

QUEEN-based Spatiotemporal ATP Imaging in Budding and Fission Yeast.

Masak Takaine1,2.   

Abstract

Yeasts have provided an exceptional model for studying metabolism and bioenergetics in eukaryotic cells. Among numerous metabolites, adenosine triphosphate (ATP) is a major metabolite that is essential for all living organisms. Therefore, a clearer understanding of ATP dynamics in living yeast cells is important for deciphering cellular energy metabolism. However, none of the methods currently available to measure ATP, including biochemical analyses and ATP indicators, have been suitable for close examinations of ATP concentrations in yeast cells at the single cell level. Using the recently developed ATP biosensor QUEEN, which is suitable for yeasts and bacteria, a protocol was described herein to visualize ATP concentrations in living budding and fission yeast cells. This simple method enables the easy and reliable examination of ATP dynamics in various yeast mutants, thereby providing novel molecular insights into cellular energy metabolism.
Copyright © 2019 The Authors; exclusive licensee Bio-protocol LLC.

Entities:  

Keywords:  ATP; Biosensor; Budding yeast; Energy metabolism; Fission yeast; Live cell imaging; Mitochondria; QUEEN

Year:  2019        PMID: 33654827      PMCID: PMC7854253          DOI: 10.21769/BioProtoc.3320

Source DB:  PubMed          Journal:  Bio Protoc        ISSN: 2331-8325


  14 in total

1.  ATP-Dependent Dynamic Protein Aggregation Regulates Bacterial Dormancy Depth Critical for Antibiotic Tolerance.

Authors:  Yingying Pu; Yingxing Li; Xin Jin; Tian Tian; Qi Ma; Ziyi Zhao; Ssu-Yuan Lin; Zhanghua Chen; Binghui Li; Guang Yao; Mark C Leake; Chien-Jung Lo; Fan Bai
Journal:  Mol Cell       Date:  2018-11-21       Impact factor: 17.970

2.  Spindle pole body movement is affected by glucose and ammonium chloride in fission yeast.

Authors:  Hiroaki Ito; Takeshi Sugawara; Soya Shinkai; Satoshi Mizukawa; Ayaka Kondo; Hisamichi Senda; Kengo Sawai; Koki Ito; Sayaka Suzuki; Masakatsu Takaine; Satoshi Yoshida; Hiromi Imamura; Kenji Kitamura; Toshinori Namba; Shin-Ichi Tate; Masaru Ueno
Journal:  Biochem Biophys Res Commun       Date:  2019-03-04       Impact factor: 3.575

3.  Reliable imaging of ATP in living budding and fission yeast.

Authors:  Masak Takaine; Masaru Ueno; Kenji Kitamura; Hiromi Imamura; Satoshi Yoshida
Journal:  J Cell Sci       Date:  2019-04-17       Impact factor: 5.285

4.  ATP as a biological hydrotrope.

Authors:  Avinash Patel; Liliana Malinovska; Shambaditya Saha; Jie Wang; Simon Alberti; Yamuna Krishnan; Anthony A Hyman
Journal:  Science       Date:  2017-05-19       Impact factor: 47.728

5.  Nutritional requirements of the BY series of Saccharomyces cerevisiae strains for optimum growth.

Authors:  Michael Hanscho; David E Ruckerbauer; Neha Chauhan; Harald F Hofbauer; Stefan Krahulec; Bernd Nidetzky; Sepp D Kohlwein; Juergen Zanghellini; Klaus Natter
Journal:  FEMS Yeast Res       Date:  2012-07-31       Impact factor: 2.796

Review 6.  The Warburg and Crabtree effects: On the origin of cancer cell energy metabolism and of yeast glucose repression.

Authors:  Rodrigo Diaz-Ruiz; Michel Rigoulet; Anne Devin
Journal:  Biochim Biophys Acta       Date:  2010-09-08

7.  Local release of ATP into the arterial inflow and venous drainage of human skeletal muscle: insight from ATP determination with the intravascular microdialysis technique.

Authors:  Stefan P Mortensen; Pia Thaning; Michael Nyberg; Bengt Saltin; Ylva Hellsten
Journal:  J Physiol       Date:  2011-02-07       Impact factor: 5.182

8.  Rapid glucose depletion immobilizes active myosin V on stabilized actin cables.

Authors:  Li Xu; Anthony Bretscher
Journal:  Curr Biol       Date:  2014-10-09       Impact factor: 10.834

9.  Visualization of ATP levels inside single living cells with fluorescence resonance energy transfer-based genetically encoded indicators.

Authors:  Hiromi Imamura; Kim P Huynh Nhat; Hiroko Togawa; Kenta Saito; Ryota Iino; Yasuyuki Kato-Yamada; Takeharu Nagai; Hiroyuki Noji
Journal:  Proc Natl Acad Sci U S A       Date:  2009-08-31       Impact factor: 11.205

10.  Diversity in ATP concentrations in a single bacterial cell population revealed by quantitative single-cell imaging.

Authors:  Hideyuki Yaginuma; Shinnosuke Kawai; Kazuhito V Tabata; Keisuke Tomiyama; Akira Kakizuka; Tamiki Komatsuzaki; Hiroyuki Noji; Hiromi Imamura
Journal:  Sci Rep       Date:  2014-10-06       Impact factor: 4.379

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  2 in total

1.  Assessment of Cytotoxicity of α-Synuclein in Budding Yeast Using a Spot Growth Assay and Fluorescent Microscopy.

Authors:  Masak Takaine
Journal:  Methods Mol Biol       Date:  2021

2.  High and stable ATP levels prevent aberrant intracellular protein aggregation in yeast.

Authors:  Masak Takaine; Hiromi Imamura; Satoshi Yoshida
Journal:  Elife       Date:  2022-04-19       Impact factor: 8.713

  2 in total

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