Literature DB >> 19720993

Visualization of ATP levels inside single living cells with fluorescence resonance energy transfer-based genetically encoded indicators.

Hiromi Imamura1, Kim P Huynh Nhat, Hiroko Togawa, Kenta Saito, Ryota Iino, Yasuyuki Kato-Yamada, Takeharu Nagai, Hiroyuki Noji.   

Abstract

Adenosine 5'-triphosphate (ATP) is the major energy currency of cells and is involved in many cellular processes. However, there is no method for real-time monitoring of ATP levels inside individual living cells. To visualize ATP levels, we generated a series of fluorescence resonance energy transfer (FRET)-based indicators for ATP that were composed of the epsilon subunit of the bacterial F(o)F(1)-ATP synthase sandwiched by the cyan- and yellow-fluorescent proteins. The indicators, named ATeams, had apparent dissociation constants for ATP ranging from 7.4 muM to 3.3 mM. By targeting ATeams to different subcellular compartments, we unexpectedly found that ATP levels in the mitochondrial matrix of HeLa cells are significantly lower than those of cytoplasm and nucleus. We also succeeded in measuring changes in the ATP level inside single HeLa cells after treatment with inhibitors of glycolysis and/or oxidative phosphorylation, revealing that glycolysis is the major ATP-generating pathway of the cells grown in glucose-rich medium. This was also confirmed by an experiment using oligomycin A, an inhibitor of F(o)F(1)-ATP synthase. In addition, it was demonstrated that HeLa cells change ATP-generating pathway in response to changes of nutrition in the environment.

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Year:  2009        PMID: 19720993      PMCID: PMC2735558          DOI: 10.1073/pnas.0904764106

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  25 in total

1.  ATP-dependent interaction of the cytosolic domains of the inwardly rectifying K+ channel Kir6.2 revealed by fluorescence resonance energy transfer.

Authors:  Takashi Tsuboi; Jonathan D Lippiat; Frances M Ashcroft; Guy A Rutter
Journal:  Proc Natl Acad Sci U S A       Date:  2003-12-17       Impact factor: 11.205

2.  On respiratory impairment in cancer cells.

Authors:  O WARBURG
Journal:  Science       Date:  1956-08-10       Impact factor: 47.728

3.  Expanded dynamic range of fluorescent indicators for Ca(2+) by circularly permuted yellow fluorescent proteins.

Authors:  Takeharu Nagai; Shuichi Yamada; Takashi Tominaga; Michinori Ichikawa; Atsushi Miyawaki
Journal:  Proc Natl Acad Sci U S A       Date:  2004-07-09       Impact factor: 11.205

4.  Measurement of cytosolic, mitochondrial, and Golgi pH in single living cells with green fluorescent proteins.

Authors:  J Llopis; J M McCaffery; A Miyawaki; M G Farquhar; R Y Tsien
Journal:  Proc Natl Acad Sci U S A       Date:  1998-06-09       Impact factor: 11.205

5.  Evidence that glutamine, not sugar, is the major energy source for cultured HeLa cells.

Authors:  L J Reitzer; B M Wice; D Kennell
Journal:  J Biol Chem       Date:  1979-04-25       Impact factor: 5.157

6.  Isolated epsilon subunit of thermophilic F1-ATPase binds ATP.

Authors:  Yasuyuki Kato-Yamada; Masasuke Yoshida
Journal:  J Biol Chem       Date:  2003-07-01       Impact factor: 5.157

7.  Energy substrate modulates mitochondrial structure and oxidative capacity in cancer cells.

Authors:  Rodrigue Rossignol; Robert Gilkerson; Robert Aggeler; Kunihiro Yamagata; S James Remington; Roderick A Capaldi
Journal:  Cancer Res       Date:  2004-02-01       Impact factor: 12.701

8.  Improved strategies for the delivery of GFP-based Ca2+ sensors into the mitochondrial matrix.

Authors:  Luisa Filippin; Maria Cano Abad; Stefano Gastaldello; Paulo J Magalhães; Dorianna Sandonà; Tullio Pozzan
Journal:  Cell Calcium       Date:  2005-02       Impact factor: 6.817

9.  Glucose generates sub-plasma membrane ATP microdomains in single islet beta-cells. Potential role for strategically located mitochondria.

Authors:  H J Kennedy; A E Pouli; E K Ainscow; L S Jouaville; R Rizzuto; G A Rutter
Journal:  J Biol Chem       Date:  1999-05-07       Impact factor: 5.157

10.  A genetically encoded fluorescent reporter of ATP:ADP ratio.

Authors:  Jim Berg; Yin Pun Hung; Gary Yellen
Journal:  Nat Methods       Date:  2009-01-04       Impact factor: 28.547

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  363 in total

1.  Imaging intracellular pH in live cells with a genetically encoded red fluorescent protein sensor.

Authors:  Mathew Tantama; Yin Pun Hung; Gary Yellen
Journal:  J Am Chem Soc       Date:  2011-06-09       Impact factor: 15.419

2.  Assessing actual contribution of IF1, inhibitor of mitochondrial FoF1, to ATP homeostasis, cell growth, mitochondrial morphology, and cell viability.

Authors:  Makoto Fujikawa; Hiromi Imamura; Junji Nakamura; Masasuke Yoshida
Journal:  J Biol Chem       Date:  2012-04-09       Impact factor: 5.157

3.  Single-cell imaging tools for brain energy metabolism: a review.

Authors:  Alejandro San Martín; Tamara Sotelo-Hitschfeld; Rodrigo Lerchundi; Ignacio Fernández-Moncada; Sebastian Ceballo; Rocío Valdebenito; Felipe Baeza-Lehnert; Karin Alegría; Yasna Contreras-Baeza; Pamela Garrido-Gerter; Ignacio Romero-Gómez; L Felipe Barros
Journal:  Neurophotonics       Date:  2014-05-29       Impact factor: 3.593

Review 4.  Fluorescent Biosensors for Neuronal Metabolism and the Challenges of Quantitation.

Authors:  Dorothy Koveal; Carlos Manlio Díaz-García; Gary Yellen
Journal:  Curr Opin Neurobiol       Date:  2020-06-16       Impact factor: 6.627

5.  Genetically encoded fluorescent thermosensors visualize subcellular thermoregulation in living cells.

Authors:  Shigeki Kiyonaka; Taketoshi Kajimoto; Reiko Sakaguchi; Daisuke Shinmi; Mariko Omatsu-Kanbe; Hiroshi Matsuura; Hiromi Imamura; Takenao Yoshizaki; Itaru Hamachi; Takashi Morii; Yasuo Mori
Journal:  Nat Methods       Date:  2013-10-13       Impact factor: 28.547

6.  RGB-Color Intensiometric Indicators to Visualize Spatiotemporal Dynamics of ATP in Single Cells.

Authors:  Satoshi Arai; Rókus Kriszt; Kazuki Harada; Liang-Sheng Looi; Shogo Matsuda; Devina Wongso; Satoshi Suo; Shoichi Ishiura; Yu-Hua Tseng; Michael Raghunath; Toshiro Ito; Takashi Tsuboi; Tetsuya Kitaguchi
Journal:  Angew Chem Int Ed Engl       Date:  2018-07-18       Impact factor: 15.336

7.  Activity-driven local ATP synthesis is required for synaptic function.

Authors:  Vidhya Rangaraju; Nathaniel Calloway; Timothy A Ryan
Journal:  Cell       Date:  2014-02-13       Impact factor: 41.582

8.  A molecular triage process mediated by RING finger protein 126 and BCL2-associated athanogene 6 regulates degradation of G0/G1 switch gene 2.

Authors:  Kenta Kamikubo; Hisakazu Kato; Hidetaka Kioka; Satoru Yamazaki; Osamu Tsukamoto; Yuya Nishida; Yoshihiro Asano; Hiromi Imamura; Hiroyuki Kawahara; Yasunori Shintani; Seiji Takashima
Journal:  J Biol Chem       Date:  2019-08-01       Impact factor: 5.157

Review 9.  Redox Signaling by Reactive Electrophiles and Oxidants.

Authors:  Saba Parvez; Marcus J C Long; Jesse R Poganik; Yimon Aye
Journal:  Chem Rev       Date:  2018-08-27       Impact factor: 60.622

10.  Antidiabetic Drug Metformin Prevents Progression of Pancreatic Cancer by Targeting in Part Cancer Stem Cells and mTOR Signaling.

Authors:  Altaf Mohammed; Naveena B Janakiram; Misty Brewer; Rebekah L Ritchie; Anuj Marya; Stan Lightfoot; Vernon E Steele; Chinthalapally V Rao
Journal:  Transl Oncol       Date:  2013-12-01       Impact factor: 4.243

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