Literature DB >> 33654085

Applications, challenges, and needs for employing synthetic biology beyond the lab.

Sierra M Brooks1, Hal S Alper2,3.   

Abstract

Synthetic biology holds great promise for addressing global needs. However, most current developments are not immediately translatable to 'outside-the-lab' scenarios that differ from controlled laboratory settings. Challenges include enabling long-term storage stability as well as operating in resource-limited and off-the-grid scenarios using autonomous function. Here we analyze recent advances in developing synthetic biological platforms for outside-the-lab scenarios with a focus on three major application spaces: bioproduction, biosensing, and closed-loop therapeutic and probiotic delivery. Across the Perspective, we highlight recent advances, areas for further development, possibilities for future applications, and the needs for innovation at the interface of other disciplines.

Entities:  

Year:  2021        PMID: 33654085     DOI: 10.1038/s41467-021-21740-0

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  107 in total

Review 1.  Where microbiology meets microengineering: design and applications of reporter bacteria.

Authors:  Jan Roelof van der Meer; Shimshon Belkin
Journal:  Nat Rev Microbiol       Date:  2010-07       Impact factor: 60.633

Review 2.  Designing cell function: assembly of synthetic gene circuits for cell biology applications.

Authors:  Mingqi Xie; Martin Fussenegger
Journal:  Nat Rev Mol Cell Biol       Date:  2018-08       Impact factor: 94.444

Review 3.  Biological Engineered Living Materials: Growing Functional Materials with Genetically Programmable Properties.

Authors:  Charlie Gilbert; Tom Ellis
Journal:  ACS Synth Biol       Date:  2019-01-09       Impact factor: 5.110

Review 4.  Synthetic biology for microbial production of lipid-based biofuels.

Authors:  Leo d'Espaux; Daniel Mendez-Perez; Rachel Li; Jay D Keasling
Journal:  Curr Opin Chem Biol       Date:  2015-10-23       Impact factor: 8.822

Review 5.  Synthetic biology for microbial heavy metal biosensors.

Authors:  Hyun Ju Kim; Haeyoung Jeong; Sang Jun Lee
Journal:  Anal Bioanal Chem       Date:  2017-11-28       Impact factor: 4.142

Review 6.  Pathways to cellular supremacy in biocomputing.

Authors:  Lewis Grozinger; Martyn Amos; Thomas E Gorochowski; Pablo Carbonell; Diego A Oyarzún; Ruud Stoof; Harold Fellermann; Paolo Zuliani; Huseyin Tas; Angel Goñi-Moreno
Journal:  Nat Commun       Date:  2019-11-20       Impact factor: 14.919

Review 7.  A living foundry for Synthetic Biological Materials: A synthetic biology roadmap to new advanced materials.

Authors:  Rosalind A Le Feuvre; Nigel S Scrutton
Journal:  Synth Syst Biotechnol       Date:  2018-04-17

Review 8.  Developing a new class of engineered live bacterial therapeutics to treat human diseases.

Authors:  Mark R Charbonneau; Vincent M Isabella; Ning Li; Caroline B Kurtz
Journal:  Nat Commun       Date:  2020-04-08       Impact factor: 14.919

Review 9.  Multiplexed CRISPR technologies for gene editing and transcriptional regulation.

Authors:  Alicia E Graham; Lucie Studená; Nicholas S McCarty; Rodrigo Ledesma-Amaro
Journal:  Nat Commun       Date:  2020-03-09       Impact factor: 14.919

Review 10.  The promise and challenge of therapeutic genome editing.

Authors:  Jennifer A Doudna
Journal:  Nature       Date:  2020-02-12       Impact factor: 49.962

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  9 in total

Review 1.  Advances and challenges in programming pattern formation using living cells.

Authors:  Jia Lu; Emrah Şimşek; Anita Silver; Lingchong You
Journal:  Curr Opin Chem Biol       Date:  2022-04-23       Impact factor: 8.972

Review 2.  Recent Progress, Challenges, and Trends in Polymer-Based Sensors: A Review.

Authors:  Mir Waqas Alam; Shahidul Islam Bhat; Hassan S Al Qahtani; Muhammad Aamir; Muhammad Nasir Amin; Mohd Farhan; Sara Aldabal; Muhammad Shuaib Khan; Ishtiaq Jeelani; Allah Nawaz; Basma Souayeh
Journal:  Polymers (Basel)       Date:  2022-05-26       Impact factor: 4.967

3.  Absence of increased genomic variants in the cyanobacterium Chroococcidiopsis exposed to Mars-like conditions outside the space station.

Authors:  Alessandro Napoli; Diego Micheletti; Massimo Pindo; Simone Larger; Alessandro Cestaro; Jean-Pierre de Vera; Daniela Billi
Journal:  Sci Rep       Date:  2022-05-19       Impact factor: 4.996

Review 4.  Combating Infectious Diseases with Synthetic Biology.

Authors:  Anooshay Khan; Julian Ostaku; Ebru Aras; Urartu Ozgur Safak Seker
Journal:  ACS Synth Biol       Date:  2022-01-25       Impact factor: 5.110

5.  Development of Cas12a-Based Cell-Free Small-Molecule Biosensors via Allosteric Regulation of CRISPR Array Expression.

Authors:  Ahmed Mahas; Qiaochu Wang; Tin Marsic; Magdy M Mahfouz
Journal:  Anal Chem       Date:  2022-03-10       Impact factor: 6.986

Review 6.  Bacterial degrons in synthetic circuits.

Authors:  Prajakta Jadhav; Yanyan Chen; Nicholas Butzin; Javier Buceta; Arantxa Urchueguía
Journal:  Open Biol       Date:  2022-08-17       Impact factor: 7.124

Review 7.  A Framework for the Systematic Selection of Biosensor Chassis for Environmental Synthetic Biology.

Authors:  Swetha Sridhar; Caroline M Ajo-Franklin; Caroline A Masiello
Journal:  ACS Synth Biol       Date:  2022-08-12       Impact factor: 5.249

8.  To infinity and beyond: Strategies for fabricating medicines in outer space.

Authors:  Iria Seoane-Viaño; Jun Jie Ong; Abdul W Basit; Alvaro Goyanes
Journal:  Int J Pharm X       Date:  2022-06-16

Review 9.  How to Unravel the Key Functions of Cryptic Oomycete Elicitin Proteins and Their Role in Plant Disease.

Authors:  Aayushree Kharel; Md Tohidul Islam; James Rookes; David Cahill
Journal:  Plants (Basel)       Date:  2021-06-12
  9 in total

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