Literature DB >> 33643386

Deep Learning in Head and Neck Tumor Multiomics Diagnosis and Analysis: Review of the Literature.

Xi Wang1,2, Bin-Bin Li1,2.   

Abstract

Head and neck tumors are the sixth most common neoplasms. Multiomics integrates multiple dimensions of clinical, pathologic, radiological, and biological data and has the potential for tumor diagnosis and analysis. Deep learning (DL), a type of artificial intelligence (AI), is applied in medical image analysis. Among the DL techniques, the convolution neural network (CNN) is used for image segmentation, detection, and classification and in computer-aided diagnosis. Here, we reviewed multiomics image analysis of head and neck tumors using CNN and other DL neural networks. We also evaluated its application in early tumor detection, classification, prognosis/metastasis prediction, and the signing out of the reports. Finally, we highlighted the challenges and potential of these techniques.
Copyright © 2021 Wang and Li.

Entities:  

Keywords:  artificial intelligence; deep learning; diagnosis; head and neck tumors; multi-omics

Year:  2021        PMID: 33643386      PMCID: PMC7902873          DOI: 10.3389/fgene.2021.624820

Source DB:  PubMed          Journal:  Front Genet        ISSN: 1664-8021            Impact factor:   4.599


  98 in total

1.  Perfusion CT radiomics as potential prognostic biomarker in head and neck squamous cell carcinoma.

Authors:  M Bogowicz; S Tanadini-Lang; P Veit-Haibach; M Pruschy; S Bender; A Sharma; M Hüllner; G Studer; S Stieb; H Hemmatazad; S Glatz; M Guckenberger; O Riesterer
Journal:  Acta Oncol       Date:  2019-07-14       Impact factor: 4.089

2.  Fertility-GRU: Identifying Fertility-Related Proteins by Incorporating Deep-Gated Recurrent Units and Original Position-Specific Scoring Matrix Profiles.

Authors:  Nguyen Quoc Khanh Le
Journal:  J Proteome Res       Date:  2019-08-07       Impact factor: 4.466

3.  Imaging-Genomic Study of Head and Neck Squamous Cell Carcinoma: Associations Between Radiomic Phenotypes and Genomic Mechanisms via Integration of The Cancer Genome Atlas and The Cancer Imaging Archive.

Authors:  Yitan Zhu; Abdallah S R Mohamed; Stephen Y Lai; Shengjie Yang; Aasheesh Kanwar; Lin Wei; Mona Kamal; Subhajit Sengupta; Hesham Elhalawani; Heath Skinner; Dennis S Mackin; Jay Shiao; Jay Messer; Andrew Wong; Yao Ding; Lifei Zhang; Laurence Court; Yuan Ji; Clifton D Fuller
Journal:  JCO Clin Cancer Inform       Date:  2019-02

4.  Multi-Level Multi-Modality Fusion Radiomics: Application to PET and CT Imaging for Prognostication of Head and Neck Cancer.

Authors:  Wenbing Lv; Saeed Ashrafinia; Jianhua Ma; Lijun Lu; Arman Rahmim
Journal:  IEEE J Biomed Health Inform       Date:  2019-12-04       Impact factor: 5.772

Review 5.  Mass spectrometry-based clinical proteomics: head-and-neck cancer biomarkers and drug-targets discovery.

Authors:  Ajay Matta; Ranju Ralhan; Leroi V DeSouza; K W Michael Siu
Journal:  Mass Spectrom Rev       Date:  2010 Nov-Dec       Impact factor: 10.946

6.  A deep learning algorithm for detection of oral cavity squamous cell carcinoma from photographic images: A retrospective study.

Authors:  Qiuyun Fu; Yehansen Chen; Zhihang Li; Qianyan Jing; Chuanyu Hu; Han Liu; Jiahao Bao; Yuming Hong; Ting Shi; Kaixiong Li; Haixiao Zou; Yong Song; Hengkun Wang; Xiqian Wang; Yufan Wang; Jianying Liu; Hui Liu; Sulin Chen; Ruibin Chen; Man Zhang; Jingjing Zhao; Junbo Xiang; Bing Liu; Jun Jia; Hanjiang Wu; Yifang Zhao; Lin Wan; Xuepeng Xiong
Journal:  EClinicalMedicine       Date:  2020-09-23

Review 7.  Finding the genetic determinants of adverse reactions to radiotherapy.

Authors:  T Rattay; C J Talbot
Journal:  Clin Oncol (R Coll Radiol)       Date:  2014-04-01       Impact factor: 4.126

8.  Genome-wide association study identifies genetic susceptibility loci and pathways of radiation-induced acute oral mucositis.

Authors:  Da-Wei Yang; Tong-Min Wang; Jiang-Bo Zhang; Xi-Zhao Li; Yong-Qiao He; Ruowen Xiao; Wen-Qiong Xue; Xiao-Hui Zheng; Pei-Fen Zhang; Shao-Dan Zhang; Ye-Zhu Hu; Guo-Ping Shen; Mingyuan Chen; Ying Sun; Wei-Hua Jia
Journal:  J Transl Med       Date:  2020-06-05       Impact factor: 5.531

9.  Optical biopsy of head and neck cancer using hyperspectral imaging and convolutional neural networks.

Authors:  Martin Halicek; James V Little; Xu Wang; Amy Y Chen; Baowei Fei
Journal:  J Biomed Opt       Date:  2019-03       Impact factor: 3.170

10.  A surprising cross-species conservation in the genomic landscape of mouse and human oral cancer identifies a transcriptional signature predicting metastatic disease.

Authors:  Michael D Onken; Ashley E Winkler; Krishna-Latha Kanchi; Varun Chalivendra; Jonathan H Law; Charles G Rickert; Dorina Kallogjeri; Nancy P Judd; Gavin P Dunn; Jay F Piccirillo; James S Lewis; Elaine R Mardis; Ravindra Uppaluri
Journal:  Clin Cancer Res       Date:  2014-03-25       Impact factor: 12.531

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  1 in total

1.  Combining Tumor Segmentation Masks with PET/CT Images and Clinical Data in a Deep Learning Framework for Improved Prognostic Prediction in Head and Neck Squamous Cell Carcinoma.

Authors:  Kareem A Wahid; Renjie He; Cem Dede; Abdallah S R Mohamed; Moamen Abobakr Abdelaal; Lisanne V van Dijk; Clifton D Fuller; Mohamed A Naser
Journal:  Head Neck Tumor Segm Chall (2021)       Date:  2022-03-13
  1 in total

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