| Literature DB >> 33638460 |
Asim Z Abbasi1, Dania A Kiyani1, Syeda M Hamid1, Muhammad Saalim1,2, Ammad Fahim3, Nasir Jalal1,4.
Abstract
Epidemiological data shows a discrepancy in COVID-19 susceptibility and outcomes with some regions being more heavily affected than others. However, the factors that determine host susceptibility and pathogenicity remain elusive. An increasing number of publications highlight the role of Transmembrane Serine Protease 2 (TMPRSS2) in the susceptibility of the host cell to SARS-CoV-2. Cleavage of viral spike protein via the host cell's TMPRSS2 enzyme activity mediates viral entry into the host cell. The enzyme synthesis is regulated by the TMPRSS2 gene, which has also been implicated in the entry mechanisms of previously reported Coronavirus infections. In this review, we have investigated the pathogenicity of SARS-CoV-2 and disease susceptibility dependence on the TMPRSS2 gene as expressed in various population groups. We further discuss how the differential expression of this gene in various ethnic groups can affect the SARS-CoV-2 infection and Coronavirus disease (COVID)-19 outcomes. Moreover, promising new TMPRSS2 protease blockers and inhibitors are discussed for COVID-19 treatment.Entities:
Keywords: COVID-19; SARS-CoV-2; TMPRSS2; TMPRSS2 blockers; TMPRSS2 inhibitors; coronavirus; differential gene expression; viral entry
Mesh:
Substances:
Year: 2021 PMID: 33638460 PMCID: PMC8014076 DOI: 10.1002/jmv.26911
Source DB: PubMed Journal: J Med Virol ISSN: 0146-6615 Impact factor: 20.693
Figure 1Functional domains of TMPRSS2 protein and their location in the protein sequence. TMPRSS2 contains the noncatalytic chain(1–255) and catalytic chain (256–492). The catalytic chain contains HIS 296, ASP 345, and SER 441 residues, which function as the binding and catalytic sites. ASP (D), HIS (H), LDL receptor class A (LDLRA) domain, scavenger receptor cysteine‐rich (SRCR) domain, SER (S), serine protease (SP) domain, and transmembrane (TM) domain
Case fatality ratio (CFR) among different population age groups in the named countries
| Country | Population age group | CFR (%) | References |
|---|---|---|---|
| China | 40–49 | 0.4 |
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| 80+ | 14.8 | ||
| Korea | 80+ | 18.31 |
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| Singapore | 60–69 | 1.84 |
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| 70–79 | 5.57 | ||
| 90+ | 76.92 | ||
| Japan | 60–69 | 5.52 | |
| 70‐79 | 15.49 | ||
| 80–89 | 28.77 | ||
| 90+ | 33.22 | ||
| Italy | 40–49 | 0.7 |
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| 80+ | 27.7 | ||
| 60+ | 96.9 | ||
| United States | ≥65 | 80 |
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Difference in body TMPRSS2 expression level difference between different ethnicities
| Ethnic population |
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| Africans versus Europeans |
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| Africans versus Americans |
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| Africans versus East Asians |
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| Africans versus South Asians |
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| Europeans versus Americans |
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| Europeans versus East Asians |
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| Europeans versus South Asians |
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| Americans versus East Asians |
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| Americans versus South Asians |
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| East Asians versus South Asians |
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The gnomAD database (based on WGS data) annotated allele frequency of eQTL variant rs35074065 in different population groups
| Population | Allele frequency |
|---|---|
| Africans/African Americans | 0.12 |
| Latino/Admixed Americans | 0.26 |
| Ashkenazi Jews | 0.47 |
| East Asians | 0.0 |
| Unassigned populations | 0.34 |
| Finnish | 0.34 |
| Non‐Finnish Europeans | 0.45 |
| Southern Europeans | 0.45 |
| North‐Western Europeans | 0.46 |
| Estonians | 0.42 |
Differences in the methodology and results obtained
| Methodology | GEO datasets used | Result | References |
|---|---|---|---|
| GTEX and GEO repository | GSE66499 and GSE19804 | Men have significantly higher expression in Bronchial Epithelium ( |
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| Only GEO | GSE103174, GSE123352, GSE16008, GSE18385, GSE18385, GSE37147, GSE4115, and GSE43696 | No difference in |
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Figure 2Role of TMPRSS2 protease in SARS‐CoV‐2 in infection. After binding of the SARS‐CoV‐2 S‐protein with the ACE2 receptor, the S‐protein is primed by TMPRSS2 protease that results in the viral entry. Plus (+) sign indicates all the factors that increase TMPRSS2 protease expression and SARS‐CoV‐2 priming. Inhibitor (‐‐‐) sign indicates therapeutic targets that can have inhibitory action against TMPRSS2 protease