Literature DB >> 33623984

Enhanced homology-directed repair for highly efficient gene editing in hematopoietic stem/progenitor cells.

Suk See De Ravin1, Julie Brault1, Ronald J Meis2, Siyuan Liu3, Linhong Li4, Mara Pavel-Dinu5, Cicera R Lazzarotto6, Taylor Liu1, Sherry M Koontz1, Uimook Choi1, Colin L Sweeney1, Narda Theobald1, GaHyun Lee6, Aaron B Clark3, Sandra S Burkett7, Benjamin P Kleinstiver8,9, Matthew H Porteus5, Shengdar Tsai6, Douglas B Kuhns1, Gary A Dahl2, Stephen Headey10, Xiaolin Wu3, Harry L Malech1.   

Abstract

Lentivector gene therapy for X-linked chronic granulomatous disease (X-CGD) has proven to be a viable approach, but random vector integration and subnormal protein production from exogenous promoters in transduced cells remain concerning for long-term safety and efficacy. A previous genome editing-based approach using Streptococcus pyogenes Cas9 mRNA and an oligodeoxynucleotide donor to repair genetic mutations showed the capability to restore physiological protein expression but lacked sufficient efficiency in quiescent CD34+ hematopoietic cells for clinical translation. Here, we report that transient inhibition of p53-binding protein 1 (53BP1) significantly increased (2.3-fold) long-term homology-directed repair to achieve highly efficient (80% gp91phox+ cells compared with healthy donor control subjects) long-term correction of X-CGD CD34+ cells.

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Year:  2021        PMID: 33623984      PMCID: PMC8120141          DOI: 10.1182/blood.2020008503

Source DB:  PubMed          Journal:  Blood        ISSN: 0006-4971            Impact factor:   22.113


  29 in total

1.  Degenerate oligonucleotide-primed PCR: general amplification of target DNA by a single degenerate primer.

Authors:  H Telenius; N P Carter; C E Bebb; M Nordenskjöld; B A Ponder; A Tunnacliffe
Journal:  Genomics       Date:  1992-07       Impact factor: 5.736

2.  Lentiviral gene therapy for X-linked chronic granulomatous disease.

Authors:  Donald B Kohn; Claire Booth; Elizabeth M Kang; Sung-Yun Pai; Kit L Shaw; Giorgia Santilli; Myriam Armant; Karen F Buckland; Uimook Choi; Suk See De Ravin; Morna J Dorsey; Caroline Y Kuo; Diego Leon-Rico; Christine Rivat; Natalia Izotova; Kimberly Gilmour; Katie Snell; Jinhua Xu-Bayford Dip; Jinan Darwish; Emma C Morris; Dayna Terrazas; Leo D Wang; Christopher A Bauser; Tobias Paprotka; Douglas B Kuhns; John Gregg; Hayley E Raymond; John K Everett; Geraldine Honnet; Luca Biasco; Peter E Newburger; Frederic D Bushman; Manuel Grez; H Bobby Gaspar; David A Williams; Harry L Malech; Anne Galy; Adrian J Thrasher
Journal:  Nat Med       Date:  2020-01-27       Impact factor: 53.440

3.  Editing the Sickle Cell Disease Mutation in Human Hematopoietic Stem Cells: Comparison of Endonucleases and Homologous Donor Templates.

Authors:  Zulema Romero; Anastasia Lomova; Suzanne Said; Alexandra Miggelbrink; Caroline Y Kuo; Beatriz Campo-Fernandez; Megan D Hoban; Katelyn E Masiuk; Danielle N Clark; Joseph Long; Julie M Sanchez; Miriam Velez; Eric Miyahira; Ruixue Zhang; Devin Brown; Xiaoyan Wang; Yerbol Z Kurmangaliyev; Roger P Hollis; Donald B Kohn
Journal:  Mol Ther       Date:  2019-05-24       Impact factor: 11.454

4.  CRISPR-Cas9 gene repair of hematopoietic stem cells from patients with X-linked chronic granulomatous disease.

Authors:  Suk See De Ravin; Linhong Li; Xiaolin Wu; Uimook Choi; Cornell Allen; Sherry Koontz; Janet Lee; Narda Theobald-Whiting; Jessica Chu; Mary Garofalo; Colin Sweeney; Lela Kardava; Susan Moir; Angelia Viley; Pachai Natarajan; Ling Su; Douglas Kuhns; Kol A Zarember; Madhusudan V Peshwa; Harry L Malech
Journal:  Sci Transl Med       Date:  2017-01-11       Impact factor: 17.956

5.  Residual NADPH oxidase and survival in chronic granulomatous disease.

Authors:  Douglas B Kuhns; W Gregory Alvord; Theo Heller; Jordan J Feld; Kristen M Pike; Beatriz E Marciano; Gulbu Uzel; Suk See DeRavin; Debra A Long Priel; Benjamin P Soule; Kol A Zarember; Harry L Malech; Steven M Holland; John I Gallin
Journal:  N Engl J Med       Date:  2010-12-30       Impact factor: 91.245

6.  Chemically modified guide RNAs enhance CRISPR-Cas genome editing in human primary cells.

Authors:  Ayal Hendel; Rasmus O Bak; Joseph T Clark; Andrew B Kennedy; Daniel E Ryan; Subhadeep Roy; Israel Steinfeld; Benjamin D Lunstad; Robert J Kaiser; Alec B Wilkens; Rosa Bacchetta; Anya Tsalenko; Douglas Dellinger; Laurakay Bruhn; Matthew H Porteus
Journal:  Nat Biotechnol       Date:  2015-06-29       Impact factor: 54.908

7.  H2AX is required for cell cycle arrest via the p53/p21 pathway.

Authors:  Michalis Fragkos; Jaana Jurvansuu; Peter Beard
Journal:  Mol Cell Biol       Date:  2009-03-09       Impact factor: 4.272

8.  Inhibition of 53BP1 favors homology-dependent DNA repair and increases CRISPR-Cas9 genome-editing efficiency.

Authors:  Marella D Canny; Nathalie Moatti; Leo C K Wan; Amélie Fradet-Turcotte; Danielle Krasner; Pedro A Mateos-Gomez; Michal Zimmermann; Alexandre Orthwein; Yu-Chi Juang; Wei Zhang; Sylvie M Noordermeer; Eduardo Seclen; Marcus D Wilson; Andrew Vorobyov; Meagan Munro; Andreas Ernst; Timothy F Ng; Tiffany Cho; Paula M Cannon; Sachdev S Sidhu; Frank Sicheri; Daniel Durocher
Journal:  Nat Biotechnol       Date:  2017-11-27       Impact factor: 54.908

9.  Precise Gene Editing Preserves Hematopoietic Stem Cell Function following Transient p53-Mediated DNA Damage Response.

Authors:  Giulia Schiroli; Anastasia Conti; Samuele Ferrari; Lucrezia Della Volpe; Aurelien Jacob; Luisa Albano; Stefano Beretta; Andrea Calabria; Valentina Vavassori; Patrizia Gasparini; Eralda Salataj; Delphine Ndiaye-Lobry; Chiara Brombin; Julie Chaumeil; Eugenio Montini; Ivan Merelli; Pietro Genovese; Luigi Naldini; Raffaella Di Micco
Journal:  Cell Stem Cell       Date:  2019-03-21       Impact factor: 24.633

10.  Stimulation of CRISPR-mediated homology-directed repair by an engineered RAD18 variant.

Authors:  Tarun S Nambiar; Pierre Billon; Giacomo Diedenhofen; Samuel B Hayward; Angelo Taglialatela; Kunheng Cai; Jen-Wei Huang; Giuseppe Leuzzi; Raquel Cuella-Martin; Andrew Palacios; Anuj Gupta; Dieter Egli; Alberto Ciccia
Journal:  Nat Commun       Date:  2019-07-30       Impact factor: 14.919

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  13 in total

Review 1.  Editing outside the body: Ex vivo gene-modification for β-hemoglobinopathy cellular therapy.

Authors:  Tolulope O Rosanwo; Daniel E Bauer
Journal:  Mol Ther       Date:  2021-10-08       Impact factor: 11.454

2.  Systematic discovery of recombinases for efficient integration of large DNA sequences into the human genome.

Authors:  Matthew G Durrant; Alison Fanton; Josh Tycko; Michaela Hinks; Sita S Chandrasekaran; Nicholas T Perry; Julia Schaepe; Peter P Du; Peter Lotfy; Michael C Bassik; Lacramioara Bintu; Ami S Bhatt; Patrick D Hsu
Journal:  Nat Biotechnol       Date:  2022-10-10       Impact factor: 68.164

Review 3.  In vivo somatic cell base editing and prime editing.

Authors:  Gregory A Newby; David R Liu
Journal:  Mol Ther       Date:  2021-09-10       Impact factor: 11.454

Review 4.  Understanding and overcoming adverse consequences of genome editing on hematopoietic stem and progenitor cells.

Authors:  Byung-Chul Lee; Richard J Lozano; Cynthia E Dunbar
Journal:  Mol Ther       Date:  2021-09-10       Impact factor: 11.454

5.  CRISPR-targeted MAGT1 insertion restores XMEN patient hematopoietic stem cells and lymphocytes.

Authors:  Julie Brault; Taylor Liu; Ezekiel Bello; Siyuan Liu; Colin L Sweeney; Ronald J Meis; Sherry Koontz; Cristina Corsino; Uimook Choi; Guillaume Vayssiere; Marita Bosticardo; Kennichi Dowdell; Cicera R Lazzarotto; Aaron B Clark; Luigi D Notarangelo; Juan C Ravell; Michael J Lenardo; Benjamin P Kleinstiver; Shengdar Q Tsai; Xiaolin Wu; Gary A Dahl; Harry L Malech; Suk See De Ravin
Journal:  Blood       Date:  2021-12-30       Impact factor: 25.476

6.  Optimization of AAV6 transduction enhances site-specific genome editing of primary human lymphocytes.

Authors:  Geoffrey L Rogers; Chun Huang; Robert D E Clark; Eduardo Seclén; Hsu-Yu Chen; Paula M Cannon
Journal:  Mol Ther Methods Clin Dev       Date:  2021-09-10       Impact factor: 6.698

7.  CRISPR/Cas-Based Gene Editing Strategies for DOCK8 Immunodeficiency Syndrome.

Authors:  Sujan Ravendran; Sabina Sánchez Hernández; Saskia König; Rasmus O Bak
Journal:  Front Genome Ed       Date:  2022-03-17

Review 8.  Gene Editing for Inherited Red Blood Cell Diseases.

Authors:  Oscar Quintana-Bustamante; Sara Fañanas-Baquero; Mercedes Dessy-Rodriguez; Isabel Ojeda-Pérez; Jose-Carlos Segovia
Journal:  Front Physiol       Date:  2022-03-28       Impact factor: 4.566

Review 9.  A Curative DNA Code for Hematopoietic Defects: Novel Cell Therapies for Monogenic Diseases of the Blood and Immune System.

Authors:  Matthew H Porteus; Mara Pavel-Dinu; Sung-Yun Pai
Journal:  Hematol Oncol Clin North Am       Date:  2022-06-27       Impact factor: 2.861

10.  High-Throughput Imaging of CRISPR- and Recombinant Adeno-Associated Virus-Induced DNA Damage Response in Human Hematopoietic Stem and Progenitor Cells.

Authors:  Daniel Allen; Lucien E Weiss; Alon Saguy; Michael Rosenberg; Ortal Iancu; Omri Matalon; Ciaran Lee; Katia Beider; Arnon Nagler; Yoav Shechtman; Ayal Hendel
Journal:  CRISPR J       Date:  2022-01-20
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