Literature DB >> 33622403

The bacterial communities of Alaskan mosses and their contributions to N2-fixation.

Hannah Holland-Moritz1, Julia E M Stuart2, Lily R Lewis3, Samantha N Miller2, Michelle C Mack2, Jose Miguel Ponciano4, Stuart F McDaniel4, Noah Fierer5,6.   

Abstract

BACKGROUND: Mosses in high-latitude ecosystems harbor diverse bacterial taxa, including N2-fixers which are key contributors to nitrogen dynamics in these systems. Yet the relative importance of moss host species, and environmental factors, in structuring these microbial communities and their N2-fixing potential remains unclear. We studied 26 boreal and tundra moss species across 24 sites in Alaska, USA, from 61 to 69° N. We used cultivation-independent approaches to characterize the variation in moss-associated bacterial communities as a function of host species identity and site characteristics. We also measured N2-fixation rates via 15N2 isotopic enrichment and identified potential N2-fixing bacteria using available literature and genomic information.
RESULTS: Host species identity and host evolutionary history were both highly predictive of moss microbiome composition, highlighting strong phylogenetic coherence in these microbial communities. Although less important, light availability and temperature also influenced composition of the moss microbiome. Finally, we identified putative N2-fixing bacteria specific to some moss hosts, including potential N2-fixing bacteria outside well-studied cyanobacterial clades.
CONCLUSIONS: The strong effect of host identity on moss-associated bacterial communities demonstrates mosses' utility for understanding plant-microbe interactions in non-leguminous systems. Our work also highlights the likely importance of novel bacterial taxa to N2-fixation in high-latitude ecosystems. Video Abstract.

Entities:  

Keywords:  Bryophytes; Nitrogen fixation; Phyllosphere; Plant microbiome

Year:  2021        PMID: 33622403      PMCID: PMC7903681          DOI: 10.1186/s40168-021-01001-4

Source DB:  PubMed          Journal:  Microbiome        ISSN: 2049-2618            Impact factor:   14.650


  44 in total

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Authors:  Simon P Blomberg; Theodore Garland; Anthony R Ives
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2.  Search and clustering orders of magnitude faster than BLAST.

Authors:  Robert C Edgar
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3.  Relationships between phyllosphere bacterial communities and plant functional traits in a neotropical forest.

Authors:  Steven W Kembel; Timothy K O'Connor; Holly K Arnold; Stephen P Hubbell; S Joseph Wright; Jessica L Green
Journal:  Proc Natl Acad Sci U S A       Date:  2014-09-15       Impact factor: 11.205

4.  Extant diversity of bryophytes emerged from successive post-Mesozoic diversification bursts.

Authors:  B Laenen; B Shaw; H Schneider; B Goffinet; E Paradis; A Désamoré; J Heinrichs; J C Villarreal; S R Gradstein; S F McDaniel; D G Long; L L Forrest; M L Hollingsworth; B Crandall-Stotler; E C Davis; J Engel; M Von Konrat; E D Cooper; J Patiño; C J Cox; A Vanderpoorten; A J Shaw
Journal:  Nat Commun       Date:  2014-10-27       Impact factor: 14.919

5.  Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms.

Authors:  J Gregory Caporaso; Christian L Lauber; William A Walters; Donna Berg-Lyons; James Huntley; Noah Fierer; Sarah M Owens; Jason Betley; Louise Fraser; Markus Bauer; Niall Gormley; Jack A Gilbert; Geoff Smith; Rob Knight
Journal:  ISME J       Date:  2012-03-08       Impact factor: 10.302

6.  Cultivating uncultured bacteria from northern wetlands: knowledge gained and remaining gaps.

Authors:  Svetlana N Dedysh
Journal:  Front Microbiol       Date:  2011-09-16       Impact factor: 5.640

7.  An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea.

Authors:  Daniel McDonald; Morgan N Price; Julia Goodrich; Eric P Nawrocki; Todd Z DeSantis; Alexander Probst; Gary L Andersen; Rob Knight; Philip Hugenholtz
Journal:  ISME J       Date:  2011-12-01       Impact factor: 10.302

8.  Feathermoss and epiphytic Nostoc cooperate differently: expanding the spectrum of plant-cyanobacteria symbiosis.

Authors:  Denis Warshan; Josh L Espinoza; Rhona K Stuart; R Alexander Richter; Sea-Yong Kim; Nicole Shapiro; Tanja Woyke; Nikos C Kyrpides; Kerrie Barry; Vasanth Singan; Erika Lindquist; Charles Ansong; Samuel O Purvine; Heather M Brewer; Philip D Weyman; Christopher L Dupont; Ulla Rasmussen
Journal:  ISME J       Date:  2017-08-11       Impact factor: 10.302

9.  Coral-associated bacteria demonstrate phylosymbiosis and cophylogeny.

Authors:  F Joseph Pollock; Ryan McMinds; Styles Smith; David G Bourne; Bette L Willis; Mónica Medina; Rebecca Vega Thurber; Jesse R Zaneveld
Journal:  Nat Commun       Date:  2018-11-22       Impact factor: 14.919

10.  A target enrichment probe set for resolving the flagellate land plant tree of life.

Authors:  Jesse W Breinholt; Sarah B Carey; George P Tiley; E Christine Davis; Lorena Endara; Stuart F McDaniel; Leandro G Neves; Emily B Sessa; Matt von Konrat; Sahut Chantanaorrapint; Susan Fawcett; Stefanie M Ickert-Bond; Paulo H Labiak; Juan Larraín; Marcus Lehnert; Lily R Lewis; Nathalie S Nagalingum; Nikisha Patel; Stefan A Rensing; Weston Testo; Alejandra Vasco; Juan Carlos Villarreal; Evelyn Webb Williams; J Gordon Burleigh
Journal:  Appl Plant Sci       Date:  2021-01-24       Impact factor: 1.936

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  2 in total

1.  The relationship of C and N stable isotopes to high-latitude moss-associated N2 fixation.

Authors:  Julia E M Stuart; Hannah Holland-Moritz; Mélanie Jean; Samantha N Miller; José Miguel Ponciano; Stuart F McDaniel; Michelle C Mack
Journal:  Oecologia       Date:  2021-07-28       Impact factor: 3.225

2.  Taxonomic and Metabolite Diversities of Moss-Associated Actinobacteria from Thailand.

Authors:  Chadabhorn Insuk; Pornkanok Pongpamorn; Adrian Forsythe; Atsuko Matsumoto; Satoshi Ōmura; Wasu Pathom-Aree; Naowarat Cheeptham; Jianping Xu
Journal:  Metabolites       Date:  2021-12-27
  2 in total

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