| Literature DB >> 33617686 |
Adrianna Tompros1, Andrew D Dean2, Andy Fenton2, Mark Q Wilber1,3, Edward Davis Carter1, Matthew J Gray1.
Abstract
Transmission is the fundamental process whereby pathogens infect their hosts and spread through populations, and can be characterized using mathematical functions. The functional form of transmission for emerging pathogens can determine pathogen impacts on host populations and can inform the efficacy of disease management strategies. By directly measuring transmission between infected and susceptible adult eastern newts (Notophthalmus viridescens) in aquatic mesocosms, we identified the most plausible transmission function for the emerging amphibian fungal pathogen Batrachochytrium salamandrivorans (Bsal). Although we considered a range of possible transmission functions, we found that Bsal transmission was best explained by pure frequency dependence. We observed that >90% of susceptible newts became infected within 17 days post-exposure to an infected newt across a range of host densities and initial infection prevalence treatments. Under these conditions, we estimated R0 = 4.9 for Bsal in an eastern newt population. Our results suggest that Bsal has the capability of driving eastern newt populations to extinction and that managing host density may not be an effective management strategy. Intervention strategies that prevent Bsal introduction or increase host resistance or tolerance to infection may be more effective. Our results add to the growing empirical evidence that transmission of wildlife pathogens can saturate and be functionally frequency-dependent.Entities:
Keywords: zzm321990Batrachochytriumzzm321990; amphibian; density-dependent transmission; disease; fungus; model
Mesh:
Year: 2021 PMID: 33617686 PMCID: PMC9290712 DOI: 10.1111/tbed.14043
Source DB: PubMed Journal: Transbound Emerg Dis ISSN: 1865-1674 Impact factor: 4.521
Density of adult eastern newts (Notophthalmus viridescens) and initial Bsal infection prevalence in 20 1‐m2 aquatic mesocosms
| Total density | Initial infection prevalence | ||
|---|---|---|---|
| 12.5% | 25% | 50% | |
| 2 | 1 | ||
| 4 | 1 | 2 | |
| 6 | 3 | ||
| 8 | 1 | 2 | 4 |
| 10 | 5 | ||
| 12 | 3 | 6 | |
| 14 | 7 | ||
| 16 | 2 | 4 | 8 |
| 18 | 9 | ||
| 20 | 5 | 10 | |
| 32 | 4 | 8 | 16 |
Table interior shows the number of infected newts at the start of the experiment.
Maximum‐likelihood parameter values for various forms of the transmission function , listed in order by lowest AIC (i.e. best fit). Recall that and . The lower limit in the optimization process was chosen as for all parameters, suggesting that any parameter reaching this value should be zero. FTC = ‘failed to converge’, indicating that the optimization process failed to find a minimum
| Transmission type | Transmission function | Parameters | Negative log‐likelihood | AIC |
|---|---|---|---|---|
| Frequency‐dependent |
|
| 63.2 | 128.3 |
| Quadratic saturation |
|
| 62.2 | 130.3 |
| Power law |
|
| 63.2 | 132.4 |
| Structural saturation |
|
| 62.5 | 132.9 |
| Simple prevalence |
|
| 68.7 | 139.3 |
| Power law (prevalence) |
|
| 68.4 | 142.8 |
| Quadratic saturation (prevalence) |
|
| 68.7 | 143.3 |
| Density‐dependent |
| FTC | FTC | FTC |
The transmission function has units time‐1. As are numbers and are prevalences, they are dimensionless quantities; thus, also has units time‐1 throughout, and each of the parameters has unit time. and are dimensionless. is equivalent to , but is written in the denominator to allow the optimization algorithm to select .
FIGURE 1Data used to estimate transmission (circles), compared with the mean (solid lines) of the probability distribution of susceptible individuals as predicted by the best‐fitting model, frequency‐dependent transmission (Table 2). The model was fitted to data from days 0 to 5, the period with no host deaths or recoveries from infection. Triangles represent data from day 8 in the 10 mesocosms that had no deaths or recoveries; these were not used for model optimization but instead compared with model predictions as a form of validation. Minimum 95% confidence intervals for the data are represented by shaded regions. The dashed lines indicate the total population size of each treatment
FIGURE 2Frequency‐dependent transmission function () at the maximum‐likelihood fit , plotted as a function of the density of susceptible hosts (S) for various total population sizes (N)
FIGURE 3Likelihood profile for the parameter in frequency‐dependent transmission. The location of the maximum likelihood is indicated by the dotted line and corresponds to the value given in Table 2. The shaded area represents 95% of the area under the curve, yielding the confidence interval
FIGURE 4Likelihood profiles for the parameters in quadratically saturating transmission. The location of the maximum likelihood for each parameter is given by the dotted line and corresponds to the parameter values , and given in Table 2. The shaded areas represent 95% of the area under each curve, yielding the confidence intervals , and