Literature DB >> 33604192

Cytochrome P450 monooxygenase genes in the wild silkworm, Bombyx mandarina.

Linrong Wan1,2, Anlian Zhou1, Wenfu Xiao1, Bangxing Zou1, Yaming Jiang1, Jinshu Xiao1, Cao Deng3,4, Youhong Zhang1.   

Abstract

Wild (Bombyx mandarina) and domestic silkworms (B. mori) are good models for investigating insect domestication, as 5000 years of artificial breeding and selection have resulted in significant differences between B. mandarina and B. mori. In this study, we improved the genome assemblies to the chromosome level and updated the protein-coding gene annotations for B. mandarina. Based on this updated genome, we identified 68 cytochrome P450 genes in B. mandarina. The cytochrome P450 repository in B. mandarina is smaller than in B. mori. Certain currently unknown key genes, rather than gene number, are critical for insecticide resistance in B. mandarina, which shows greater resistance to insecticides than B. mori. Based on the physical maps of B. mandarina, we located 66 cytochrome P450s on 18 different chromosomes, and 27 of the cytochrome P450 genes were concentrated into seven clusters. KEGG enrichment analysis of the P450 genes revealed the involvement of cytochrome P450 genes in hormone biosynthesis. Analyses of the silk gland transcriptome identified candidate cytochrome P450 genes (CYP306A) involved in ecdysteroidogenesis and insecticide metabolism in B. mandarina. ©2021 Wan et al.

Entities:  

Keywords:  Bombyx mandarina; Cytochrome P450; Gene family; Wild silkworm

Year:  2021        PMID: 33604192      PMCID: PMC7866900          DOI: 10.7717/peerj.10818

Source DB:  PubMed          Journal:  PeerJ        ISSN: 2167-8359            Impact factor:   2.984


  41 in total

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Journal:  Nucleic Acids Res       Date:  1999-01-01       Impact factor: 16.971

2.  Insect P450 inhibitors and insecticides: challenges and opportunities.

Authors:  René Feyereisen
Journal:  Pest Manag Sci       Date:  2014-11-17       Impact factor: 4.845

3.  A draft sequence for the genome of the domesticated silkworm (Bombyx mori).

Authors:  Qingyou Xia; Zeyang Zhou; Cheng Lu; Daojun Cheng; Fangyin Dai; Bin Li; Ping Zhao; Xingfu Zha; Tingcai Cheng; Chunli Chai; Guoqing Pan; Jinshan Xu; Chun Liu; Ying Lin; Jifeng Qian; Yong Hou; Zhengli Wu; Guanrong Li; Minhui Pan; Chunfeng Li; Yihong Shen; Xiqian Lan; Lianwei Yuan; Tian Li; Hanfu Xu; Guangwei Yang; Yongji Wan; Yong Zhu; Maode Yu; Weide Shen; Dayang Wu; Zhonghuai Xiang; Jun Yu; Jun Wang; Ruiqiang Li; Jianping Shi; Heng Li; Guangyuan Li; Jianning Su; Xiaoling Wang; Guoqing Li; Zengjin Zhang; Qingfa Wu; Jun Li; Qingpeng Zhang; Ning Wei; Jianzhe Xu; Haibo Sun; Le Dong; Dongyuan Liu; Shengli Zhao; Xiaolan Zhao; Qingshun Meng; Fengdi Lan; Xiangang Huang; Yuanzhe Li; Lin Fang; Changfeng Li; Dawei Li; Yongqiao Sun; Zhenpeng Zhang; Zheng Yang; Yanqing Huang; Yan Xi; Qiuhui Qi; Dandan He; Haiyan Huang; Xiaowei Zhang; Zhiqiang Wang; Wenjie Li; Yuzhu Cao; Yingpu Yu; Hong Yu; Jinhong Li; Jiehua Ye; Huan Chen; Yan Zhou; Bin Liu; Jing Wang; Jia Ye; Hai Ji; Shengting Li; Peixiang Ni; Jianguo Zhang; Yong Zhang; Hongkun Zheng; Bingyu Mao; Wen Wang; Chen Ye; Songgang Li; Jian Wang; Gane Ka-Shu Wong; Huanming Yang
Journal:  Science       Date:  2004-12-10       Impact factor: 47.728

Review 4.  P450 genes: structure, evolution, and regulation.

Authors:  D W Nebert; F J Gonzalez
Journal:  Annu Rev Biochem       Date:  1987       Impact factor: 23.643

Review 5.  Cytochrome P450 and the individuality of species.

Authors:  D R Nelson
Journal:  Arch Biochem Biophys       Date:  1999-09-01       Impact factor: 4.013

6.  The genome of a lepidopteran model insect, the silkworm Bombyx mori.

Authors: 
Journal:  Insect Biochem Mol Biol       Date:  2008-12-16       Impact factor: 4.714

7.  MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity.

Authors:  Yupeng Wang; Haibao Tang; Jeremy D Debarry; Xu Tan; Jingping Li; Xiyin Wang; Tae-ho Lee; Huizhe Jin; Barry Marler; Hui Guo; Jessica C Kissinger; Andrew H Paterson
Journal:  Nucleic Acids Res       Date:  2012-01-04       Impact factor: 16.971

8.  HTSeq--a Python framework to work with high-throughput sequencing data.

Authors:  Simon Anders; Paul Theodor Pyl; Wolfgang Huber
Journal:  Bioinformatics       Date:  2014-09-25       Impact factor: 6.937

9.  karyoploteR: an R/Bioconductor package to plot customizable genomes displaying arbitrary data.

Authors:  Bernat Gel; Eduard Serra
Journal:  Bioinformatics       Date:  2017-10-01       Impact factor: 6.937

10.  The Pfam protein families database.

Authors:  Alex Bateman; Lachlan Coin; Richard Durbin; Robert D Finn; Volker Hollich; Sam Griffiths-Jones; Ajay Khanna; Mhairi Marshall; Simon Moxon; Erik L L Sonnhammer; David J Studholme; Corin Yeats; Sean R Eddy
Journal:  Nucleic Acids Res       Date:  2004-01-01       Impact factor: 16.971

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