Literature DB >> 33602988

Reduction of the molecular hamiltonian matrix using quantum community detection.

Susan M Mniszewski1, Pavel A Dub2, Sergei Tretiak3, Petr M Anisimov4, Yu Zhang3, Christian F A Negre3.   

Abstract

Quantum chemistry is interested in calculating ground and excited states of molecular systems by solving the electronic Schrödinger equation. The exact numerical solution of this equation, frequently represented as an eigenvalue problem, remains unfeasible for most molecules and requires approximate methods. In this paper we introduce the use of Quantum Community Detection performed using the D-Wave quantum annealer to reduce the molecular Hamiltonian matrix in Slater determinant basis without chemical knowledge. Given a molecule represented by a matrix of Slater determinants, the connectivity between Slater determinants (as off-diagonal elements) is viewed as a graph adjacency matrix for determining multiple communities based on modularity maximization. A gauge metric based on perturbation theory is used to determine the lowest energy cluster. This cluster or sub-matrix of Slater determinants is used to calculate approximate ground state and excited state energies within chemical accuracy. The details of this method are described along with demonstrating its performance across multiple molecules of interest and bond dissociation cases. These examples provide proof-of-principle results for approximate solution of the electronic structure problem using quantum computing. This approach is general and shows potential to reduce the computational complexity of post-Hartree-Fock methods as future advances in quantum hardware become available.

Entities:  

Year:  2021        PMID: 33602988      PMCID: PMC7892829          DOI: 10.1038/s41598-021-83561-x

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.996


  16 in total

1.  Analysis of weighted networks.

Authors:  M E J Newman
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2004-11-24

2.  Simulated quantum computation of molecular energies.

Authors:  Alán Aspuru-Guzik; Anthony D Dutoi; Peter J Love; Martin Head-Gordon
Journal:  Science       Date:  2005-09-09       Impact factor: 47.728

3.  Modularity and community structure in networks.

Authors:  M E J Newman
Journal:  Proc Natl Acad Sci U S A       Date:  2006-05-24       Impact factor: 11.205

4.  Quantum Package 2.0: An Open-Source Determinant-Driven Suite of Programs.

Authors:  Yann Garniron; Thomas Applencourt; Kevin Gasperich; Anouar Benali; Anthony Ferté; Julien Paquier; Barthélémy Pradines; Roland Assaraf; Peter Reinhardt; Julien Toulouse; Pierrette Barbaresco; Nicolas Renon; Grégoire David; Jean-Paul Malrieu; Mickaël Véril; Michel Caffarel; Pierre-François Loos; Emmanuel Giner; Anthony Scemama
Journal:  J Chem Theory Comput       Date:  2019-05-29       Impact factor: 6.006

5.  Electronic Structure Calculations and the Ising Hamiltonian.

Authors:  Rongxin Xia; Teng Bian; Sabre Kais
Journal:  J Phys Chem B       Date:  2017-11-20       Impact factor: 2.991

6.  Psi4 1.1: An Open-Source Electronic Structure Program Emphasizing Automation, Advanced Libraries, and Interoperability.

Authors:  Robert M Parrish; Lori A Burns; Daniel G A Smith; Andrew C Simmonett; A Eugene DePrince; Edward G Hohenstein; Uğur Bozkaya; Alexander Yu Sokolov; Roberto Di Remigio; Ryan M Richard; Jérôme F Gonthier; Andrew M James; Harley R McAlexander; Ashutosh Kumar; Masaaki Saitow; Xiao Wang; Benjamin P Pritchard; Prakash Verma; Henry F Schaefer; Konrad Patkowski; Rollin A King; Edward F Valeev; Francesco A Evangelista; Justin M Turney; T Daniel Crawford; C David Sherrill
Journal:  J Chem Theory Comput       Date:  2017-06-06       Impact factor: 6.006

7.  Selection of active spaces for multiconfigurational wavefunctions.

Authors:  Sebastian Keller; Katharina Boguslawski; Tomasz Janowski; Markus Reiher; Peter Pulay
Journal:  J Chem Phys       Date:  2015-06-28       Impact factor: 3.488

8.  Detecting multiple communities using quantum annealing on the D-Wave system.

Authors:  Christian F A Negre; Hayato Ushijima-Mwesigwa; Susan M Mniszewski
Journal:  PLoS One       Date:  2020-02-13       Impact factor: 3.240

9.  Computational multiqubit tunnelling in programmable quantum annealers.

Authors:  Sergio Boixo; Vadim N Smelyanskiy; Alireza Shabani; Sergei V Isakov; Mark Dykman; Vasil S Denchev; Mohammad H Amin; Anatoly Yu Smirnov; Masoud Mohseni; Hartmut Neven
Journal:  Nat Commun       Date:  2016-01-07       Impact factor: 14.919

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  1 in total

1.  Molecular dynamics on quantum annealers.

Authors:  Igor Gaidai; Dmitri Babikov; Alexander Teplukhin; Brian K Kendrick; Susan M Mniszewski; Yu Zhang; Sergei Tretiak; Pavel A Dub
Journal:  Sci Rep       Date:  2022-10-07       Impact factor: 4.996

  1 in total

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