Literature DB >> 33602329

Optimization of scleroglucan production by Sclerotium rolfsii by lowering pH during fermentation via oxalate metabolic pathway manipulation using CRISPR/Cas9.

Tianlong Bai1,2, Teng Wang3, Yan Li2, Na L Gao3, Lixin Zhang4, Wei-Hua Chen5,6, Xiushan Yin7.   

Abstract

BACKGROUND: Sclerotium rolfsii is a potent producer of many secondary metabolites, one of which like scleroglucan is an exopolysaccharide (EPS) appreciated as a multipurpose compound applicable in many industrial fields.
RESULTS: Aspartate transaminase (AAT1) catalyzes the interconversion of aspartate and α-ketoglutarate to glutamate and oxaloacetate. We selected AAT1 in the oxalate metabolic pathway as a target of CRISPR/Cas9. Disruption of AAT1 leads to the accumulation of oxalate, rather than its conversion to α-ketoglutarate (AKG). Therefore, AAT1-mutant serves to lower the pH (pH 3-4) so as to increase the production of the pH-sensitive metabolite scleroglucan to 21.03 g L-1 with a productivity of up to 0.25 g L-1·h-1.
CONCLUSIONS: We established a platform for gene editing that could rapidly generate and select mutants to provide a new beneficial strain of S. rolfsii as a scleroglucan hyper-producer, which is expected to reduce the cost of controlling the optimum pH condition in the fermentation industry.

Entities:  

Keywords:  AAT1; CRISPR/Cas9; Oxalate; Scleroglucan; Sclerotium rolfsii

Year:  2021        PMID: 33602329      PMCID: PMC7893912          DOI: 10.1186/s40694-021-00108-5

Source DB:  PubMed          Journal:  Fungal Biol Biotechnol        ISSN: 2054-3085


  31 in total

1.  BLAT--the BLAST-like alignment tool.

Authors:  W James Kent
Journal:  Genome Res       Date:  2002-04       Impact factor: 9.043

2.  MView: a web-compatible database search or multiple alignment viewer.

Authors:  N P Brown; C Leroy; C Sander
Journal:  Bioinformatics       Date:  1998       Impact factor: 6.937

3.  Activation of glycerol metabolism in Xanthomonas campestris by adaptive evolution to produce a high-transparency and low-viscosity xanthan gum from glycerol.

Authors:  Zichao Wang; Jianrong Wu; Li Zhu; Xiaobei Zhan
Journal:  Bioresour Technol       Date:  2016-03-22       Impact factor: 9.642

4.  Use of complex media for the production of scleroglucan by Sclerotium rolfsii MTCC 2156.

Authors:  Shrikant A Survase; Parag S Saudagar; Rekha S Singhal
Journal:  Bioresour Technol       Date:  2006-07-05       Impact factor: 9.642

5.  Engineering aspects of microbial exopolysaccharide production.

Authors:  Filomena Freitas; Cristiana A V Torres; Maria A M Reis
Journal:  Bioresour Technol       Date:  2017-05-18       Impact factor: 9.642

6.  Detection and identification of bacteria intimately associated with fungi of the order Sebacinales.

Authors:  Monica Sharma; Michael Schmid; Michael Rothballer; Gerd Hause; Alga Zuccaro; Jafargholi Imani; Peter Kämpfer; Eugen Domann; Patrick Schäfer; Anton Hartmann; Karl-Heinz Kogel
Journal:  Cell Microbiol       Date:  2008-08-01       Impact factor: 3.715

7.  Biosurfactant production by Aureobasidium pullulans in stirred tank bioreactor: New approach to understand the influence of important variables in the process.

Authors:  Larissa Pereira Brumano; Felipe Antonio Fernandes Antunes; Sara Galeno Souto; Júlio Cesar Dos Santos; Joachim Venus; Roland Schneider; Silvio Silvério da Silva
Journal:  Bioresour Technol       Date:  2017-06-19       Impact factor: 9.642

8.  Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega.

Authors:  Fabian Sievers; Andreas Wilm; David Dineen; Toby J Gibson; Kevin Karplus; Weizhong Li; Rodrigo Lopez; Hamish McWilliam; Michael Remmert; Johannes Söding; Julie D Thompson; Desmond G Higgins
Journal:  Mol Syst Biol       Date:  2011-10-11       Impact factor: 11.429

Review 9.  Scleroglucan: a versatile polysaccharide for modified drug delivery.

Authors:  Tommasina Coviello; Antonio Palleschi; Mario Grassi; Pietro Matricardi; Gianfranco Bocchinfuso; Franco Alhaique
Journal:  Molecules       Date:  2005-01-31       Impact factor: 4.411

10.  Pervasive head-to-tail insertions of DNA templates mask desired CRISPR-Cas9-mediated genome editing events.

Authors:  Boris V Skryabin; Delf-Magnus Kummerfeld; Leonid Gubar; Birte Seeger; Helena Kaiser; Anja Stegemann; Johannes Roth; Sven G Meuth; Hermann Pavenstädt; Joanna Sherwood; Thomas Pap; Roland Wedlich-Söldner; Cord Sunderkötter; Yuri B Schwartz; Juergen Brosius; Timofey S Rozhdestvensky
Journal:  Sci Adv       Date:  2020-02-12       Impact factor: 14.136

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