Literature DB >> 33597644

Weak supervision as an efficient approach for automated seizure detection in electroencephalography.

Khaled Saab1, Jared Dunnmon2, Daniel Rubin3, Christopher Lee-Messer4, Christopher Ré2.   

Abstract

Automated seizure detection from electroencephalography (EEG) would improve the quality of patient care while reducing medical costs, but achieving reliably high performance across patients has proven difficult. Convolutional Neural Networks (CNNs) show promise in addressing this problem, but they are limited by a lack of large labeled training datasets. We propose using imperfect but plentiful archived annotations to train CNNs for automated, real-time EEG seizure detection across patients. While these weak annotations indicate possible seizures with precision scores as low as 0.37, they are commonly produced in large volumes within existing clinical workflows by a mixed group of technicians, fellows, students, and board-certified epileptologists. We find that CNNs trained using such weak annotations achieve Area Under the Receiver Operating Characteristic curve (AUROC) values of 0.93 and 0.94 for pediatric and adult seizure onset detection, respectively. Compared to currently deployed clinical software, our model provides a 31% increase (18 points) in F1-score for pediatric patients and a 17% increase (11 points) for adult patients. These results demonstrate that weak annotations, which are sustainably collected via existing clinical workflows, can be leveraged to produce clinically useful seizure detection models.

Year:  2020        PMID: 33597644     DOI: 10.1038/s41746-020-0264-0

Source DB:  PubMed          Journal:  NPJ Digit Med        ISSN: 2398-6352


  23 in total

1.  Author Response: The Timing of Continuous EEG in Critically Ill Patients: Stat? ASAP? Routine?

Authors:  Susan T Herman; Nicholas S Abend
Journal:  J Clin Neurophysiol       Date:  2015-10       Impact factor: 2.177

2.  Commentary: Operational Definition of Epilepsy survey.

Authors:  Robert S Fisher
Journal:  Epilepsia       Date:  2014-11-07       Impact factor: 5.864

3.  Corrigendum: Dermatologist-level classification of skin cancer with deep neural networks.

Authors:  Andre Esteva; Brett Kuprel; Roberto A Novoa; Justin Ko; Susan M Swetter; Helen M Blau; Sebastian Thrun
Journal:  Nature       Date:  2017-06-28       Impact factor: 49.962

4.  Behavioral disorders in pediatric epilepsy: unmet psychiatric need.

Authors:  Derek Ott; Prabha Siddarth; Suresh Gurbani; Susan Koh; Anne Tournay; W Donald Shields; Rochelle Caplan
Journal:  Epilepsia       Date:  2003-04       Impact factor: 5.864

Review 5.  The impact of epilepsy on patients' lives.

Authors:  M P Kerr
Journal:  Acta Neurol Scand Suppl       Date:  2012

Review 6.  Electrographic seizures and status epilepticus in critically ill children and neonates with encephalopathy.

Authors:  Nicholas S Abend; Courtney J Wusthoff; Ethan M Goldberg; Dennis J Dlugos
Journal:  Lancet Neurol       Date:  2013-12       Impact factor: 44.182

7.  Continuous and routine EEG in intensive care: utilization and outcomes, United States 2005-2009.

Authors:  John P Ney; David N van der Goes; Marc R Nuwer; Lonnie Nelson; Matthew A Eccher
Journal:  Neurology       Date:  2013-11-01       Impact factor: 9.910

8.  Assessment of Convolutional Neural Networks for Automated Classification of Chest Radiographs.

Authors:  Jared A Dunnmon; Darvin Yi; Curtis P Langlotz; Christopher Ré; Daniel L Rubin; Matthew P Lungren
Journal:  Radiology       Date:  2018-11-13       Impact factor: 29.146

9.  Reply: metrics to assess machine learning models.

Authors:  Alvin Rajkomar; Andrew M Dai; Mimi Sun; Michaela Hardt; Kai Chen; Kathryn Rough; Jeffrey Dean
Journal:  NPJ Digit Med       Date:  2018-10-10

10.  Health and economic benefits of public financing of epilepsy treatment in India: An agent-based simulation model.

Authors:  Itamar Megiddo; Abigail Colson; Dan Chisholm; Tarun Dua; Arindam Nandi; Ramanan Laxminarayan
Journal:  Epilepsia       Date:  2016-01-14       Impact factor: 5.864

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