Literature DB >> 33594339

Pulse of the Pandemic: Iterative Topic Filtering for Clinical Information Extraction from Social Media.

Julia Wu1, Venkatesh Sivaraman2, Dheekshita Kumar1, Juan M Banda3, David Sontag1.   

Abstract

The rapid evolution of the COVID-19 pandemic has underscored the need to quickly disseminate the latest clinical knowledge during a public-health emergency. One surprisingly effective platform for healthcare professionals (HCPs) to share knowledge and experiences from the front lines has been social media (for example, the "#medtwitter" community on Twitter). However, identifying clinically-relevant content in social media without manual labeling is a challenge because of the sheer volume of irrelevant data. We present an unsupervised, iterative approach to mine clinically relevant information from social media data, which begins by heuristically filtering for HCP-authored texts and incorporates topic modeling and concept extraction with MetaMap. This approach identifies granular topics and tweets with high clinical relevance from a set of about 52 million COVID-19-related tweets from January to mid-June 2020. We also show that because the technique does not require manual labeling, it can be used to identify emerging topics on a week-to-week basis. Our method can aid in future public-health emergencies by facilitating knowledge transfer among healthcare workers in a rapidly-changing information environment, and by providing an efficient and unsupervised way of highlighting potential areas for clinical research.

Entities:  

Year:  2021        PMID: 33594339      PMCID: PMC7885911     

Source DB:  PubMed          Journal:  ArXiv        ISSN: 2331-8422


  16 in total

1.  An overview of MetaMap: historical perspective and recent advances.

Authors:  Alan R Aronson; François-Michel Lang
Journal:  J Am Med Inform Assoc       Date:  2010 May-Jun       Impact factor: 4.497

2.  Social media and physicians: Exploring the benefits and challenges.

Authors:  Sirous Panahi; Jason Watson; Helen Partridge
Journal:  Health Informatics J       Date:  2014-07-18       Impact factor: 2.681

3.  Applying MetaMap to Medline for identifying novel associations in a large clinical dataset: a feasibility analysis.

Authors:  David A Hanauer; Mohammed Saeed; Kai Zheng; Qiaozhu Mei; Kerby Shedden; Alan R Aronson; Naren Ramakrishnan
Journal:  J Am Med Inform Assoc       Date:  2014-06-13       Impact factor: 4.497

4.  Virtual colleagues, virtually colleagues--physicians' use of Twitter: a population-based observational study.

Authors:  Anne Brynolf; Stefan Johansson; Ester Appelgren; Niels Lynoe; Anna-Karin Edstedt Bonamy
Journal:  BMJ Open       Date:  2013-07-24       Impact factor: 2.692

5.  Acute cerebrovascular disease following COVID-19: a single center, retrospective, observational study.

Authors:  Yanan Li; Man Li; Mengdie Wang; Yifan Zhou; Jiang Chang; Ying Xian; David Wang; Ling Mao; Huijuan Jin; Bo Hu
Journal:  Stroke Vasc Neurol       Date:  2020-07-02

6.  Conversations and Medical News Frames on Twitter: Infodemiological Study on COVID-19 in South Korea.

Authors:  Han Woo Park; Sejung Park; Miyoung Chong
Journal:  J Med Internet Res       Date:  2020-05-05       Impact factor: 5.428

7.  SARS-CoV-2 and Stroke in a New York Healthcare System.

Authors:  Shadi Yaghi; Koto Ishida; Jose Torres; Brian Mac Grory; Eytan Raz; Kelley Humbert; Nils Henninger; Tushar Trivedi; Kaitlyn Lillemoe; Shazia Alam; Matthew Sanger; Sun Kim; Erica Scher; Seena Dehkharghani; Michael Wachs; Omar Tanweer; Frank Volpicelli; Brian Bosworth; Aaron Lord; Jennifer Frontera
Journal:  Stroke       Date:  2020-05-20       Impact factor: 7.914

Review 8.  Going viral: A brief history of Chilblain-like skin lesions ("COVID toes") amidst the COVID-19 pandemic.

Authors:  Paul R Massey; Krystal M Jones
Journal:  Semin Oncol       Date:  2020-05-23       Impact factor: 4.929

9.  Incidence of thrombotic complications in critically ill ICU patients with COVID-19.

Authors:  F A Klok; M J H A Kruip; N J M van der Meer; M S Arbous; D A M P J Gommers; K M Kant; F H J Kaptein; J van Paassen; M A M Stals; M V Huisman; H Endeman
Journal:  Thromb Res       Date:  2020-04-10       Impact factor: 3.944

10.  The Assessment of Twitter's Potential for Outbreak Detection: Avian Influenza Case Study.

Authors:  Samira Yousefinaghani; Rozita Dara; Zvonimir Poljak; Theresa M Bernardo; Shayan Sharif
Journal:  Sci Rep       Date:  2019-12-03       Impact factor: 4.379

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