Literature DB >> 33594077

Asymmetric opening of the homopentameric 5-HT3A serotonin receptor in lipid bilayers.

Yingyi Zhang1,2,3, Patricia M Dijkman1,2,4,5,6, Rongfeng Zou7, Martina Zandl-Lang8, Ricardo M Sanchez1,2, Luise Eckhardt-Strelau1, Harald Köfeler9, Horst Vogel7,10, Shuguang Yuan11, Mikhail Kudryashev12,13.   

Abstract

Pentameric ligand-gated ion channels (pLGICs) of the pan class="Chemical">Cys-loop receptor family are key players in fast signal transduction throughout the nervous system. They have been shown to be modulated by the n>n class="Chemical">lipid environment, however the underlying mechanism is not well understood. We report three structures of the Cys-loop 5-HT3A serotonin receptor (5HT3R) reconstituted into saposin-based lipid bilayer discs: a symmetric and an asymmetric apo state, and an asymmetric agonist-bound state. In comparison to previously published 5HT3R conformations in detergent, the lipid bilayer stabilises the receptor in a more tightly packed, 'coupled' state, involving a cluster of highly conserved residues. In consequence, the agonist-bound receptor conformation adopts a wide-open pore capable of conducting sodium ions in unbiased molecular dynamics (MD) simulations. Taken together, we provide a structural basis for the modulation of 5HT3R by the membrane environment, and a model for asymmetric activation of the receptor.

Entities:  

Year:  2021        PMID: 33594077     DOI: 10.1038/s41467-021-21016-7

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  76 in total

Review 1.  Emerging Molecular Mechanisms of Signal Transduction in Pentameric Ligand-Gated Ion Channels.

Authors:  Ákos Nemecz; Marie S Prevost; Anaïs Menny; Pierre-Jean Corringer
Journal:  Neuron       Date:  2016-05-04       Impact factor: 17.173

2.  The effect of cholesterol on agonist-induced flux in reconstituted acetylcholine receptor vesicles.

Authors:  A W Dalziel; E S Rollins; M G McNamee
Journal:  FEBS Lett       Date:  1980-12-29       Impact factor: 4.124

3.  Effects of lipids and detergents on the conformation of the nicotinic acetylcholine receptor from Torpedo californica.

Authors:  M P McCarthy; M A Moore
Journal:  J Biol Chem       Date:  1992-04-15       Impact factor: 5.157

4.  Impact of lipid raft integrity on 5-HT3 receptor function and its modulation by antidepressants.

Authors:  Caroline Nothdurfter; Sascha Tanasic; Barbara Di Benedetto; Gerhard Rammes; Eva-Maria Wagner; Thomas Kirmeier; Vanessa Ganal; Julia S Kessler; Theo Rein; Florian Holsboer; Rainer Rupprecht
Journal:  Neuropsychopharmacology       Date:  2010-03-03       Impact factor: 7.853

Review 5.  The structural basis of function in Cys-loop receptors.

Authors:  Andrew J Thompson; Henry A Lester; Sarah C R Lummis
Journal:  Q Rev Biophys       Date:  2010-09-20       Impact factor: 5.318

6.  A lipid-dependent uncoupled conformation of the acetylcholine receptor.

Authors:  Corrie J B daCosta; John E Baenziger
Journal:  J Biol Chem       Date:  2009-04-08       Impact factor: 5.157

7.  Reconstitution of acetylcholine receptor function in lipid vesicles of defined composition.

Authors:  E L Ochoa; A W Dalziel; M G McNamee
Journal:  Biochim Biophys Acta       Date:  1983-01-05

8.  Functional properties of the acetylcholine receptor incorporated in model lipid membranes. Differential effects of chain length and head group of phospholipids on receptor affinity states and receptor-mediated ion translocation.

Authors:  M Criado; H Eibl; F J Barrantes
Journal:  J Biol Chem       Date:  1984-07-25       Impact factor: 5.157

9.  Structure of a human synaptic GABAA receptor.

Authors:  Shaotong Zhu; Colleen M Noviello; Jinfeng Teng; Richard M Walsh; Jeong Joo Kim; Ryan E Hibbs
Journal:  Nature       Date:  2018-06-27       Impact factor: 49.962

10.  Cryo-EM structure of the human α1β3γ2 GABAA receptor in a lipid bilayer.

Authors:  Duncan Laverty; Rooma Desai; Tomasz Uchański; Simonas Masiulis; Wojciech J Stec; Tomas Malinauskas; Jasenko Zivanov; Els Pardon; Jan Steyaert; Keith W Miller; A Radu Aricescu
Journal:  Nature       Date:  2019-01-02       Impact factor: 49.962

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  11 in total

Review 1.  Membranes under the Magnetic Lens: A Dive into the Diverse World of Membrane Protein Structures Using Cryo-EM.

Authors:  Sarah J Piper; Rachel M Johnson; Denise Wootten; Patrick M Sexton
Journal:  Chem Rev       Date:  2022-07-18       Impact factor: 72.087

Review 2.  Recent Insight into Lipid Binding and Lipid Modulation of Pentameric Ligand-Gated Ion Channels.

Authors:  Anna Ananchenko; Toka O K Hussein; Deepansh Mody; Mackenzie J Thompson; John E Baenziger
Journal:  Biomolecules       Date:  2022-06-10

3.  Asymmetric CorA Gating Mechanism as Observed by Molecular Dynamics Simulations.

Authors:  Mariia Nemchinova; Josef Melcr; Tsjerk A Wassenaar; Siewert J Marrink; Albert Guskov
Journal:  J Chem Inf Model       Date:  2021-04-22       Impact factor: 4.956

4.  Structural basis for assembly of TRAPPII complex and specific activation of GTPase Ypt31/32.

Authors:  Chenchen Mi; Li Zhang; Guoqiang Huang; Guangcan Shao; Fan Yang; Xin You; Meng-Qiu Dong; Shan Sun; Sen-Fang Sui
Journal:  Sci Adv       Date:  2022-01-26       Impact factor: 14.136

5.  Markov state models of proton- and pore-dependent activation in a pentameric ligand-gated ion channel.

Authors:  Cathrine Bergh; Stephanie A Heusser; Rebecca Howard; Erik Lindahl
Journal:  Elife       Date:  2021-10-15       Impact factor: 8.140

Review 6.  Tapping into 5-HT3 Receptors to Modify Metabolic and Immune Responses.

Authors:  Helen Irving; Ilona Turek; Christine Kettle; Nor Yaakob
Journal:  Int J Mol Sci       Date:  2021-11-02       Impact factor: 5.923

7.  Mg2+-dependent conformational equilibria in CorA and an integrated view on transport regulation.

Authors:  Nicolai Tidemand Johansen; Marta Bonaccorsi; Tone Bengtsen; Andreas Haahr Larsen; Frederik Grønbæk Tidemand; Martin Cramer Pedersen; Pie Huda; Jens Berndtsson; Tamim Darwish; Nageshewar Rao Yepuri; Anne Martel; Thomas Günther Pomorski; Andrea Bertarello; Mark Sansom; Mikaela Rapp; Ramon Crehuet; Tobias Schubeis; Kresten Lindorff-Larsen; Guido Pintacuda; Lise Arleth
Journal:  Elife       Date:  2022-02-07       Impact factor: 8.713

8.  Conformational decoupling in acid-sensing ion channels uncovers mechanism and stoichiometry of PcTx1-mediated inhibition.

Authors:  Stephanie A Heusser; Christian B Borg; Janne M Colding; Stephan A Pless
Journal:  Elife       Date:  2022-02-14       Impact factor: 8.140

Review 9.  Druggable Lipid Binding Sites in Pentameric Ligand-Gated Ion Channels and Transient Receptor Potential Channels.

Authors:  Wayland W L Cheng; Mark J Arcario; John T Petroff
Journal:  Front Physiol       Date:  2022-01-04       Impact factor: 4.566

Review 10.  Recent Advances in Structure, Function, and Pharmacology of Class A Lipid GPCRs: Opportunities and Challenges for Drug Discovery.

Authors:  R N V Krishna Deepak; Ravi Kumar Verma; Yossa Dwi Hartono; Wen Shan Yew; Hao Fan
Journal:  Pharmaceuticals (Basel)       Date:  2021-12-22
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