Literature DB >> 33594077

Asymmetric opening of the homopentameric 5-HT3A serotonin receptor in lipid bilayers.

Yingyi Zhang1,2,3, Patricia M Dijkman1,2,4,5,6, Rongfeng Zou7, Martina Zandl-Lang8, Ricardo M Sanchez1,2, Luise Eckhardt-Strelau1, Harald Köfeler9, Horst Vogel7,10, Shuguang Yuan11, Mikhail Kudryashev12,13.   

Abstract

pan class="Chemical">Pentameric ligand-gated ion channels (pLGICs) of the pan class="Chemical">Cys-loop receptor family are key players in fast signal transduction throughout the nervous system. They have been shown to be modulated by the lipid environment, however the underlying mechanism is not well understood. We report three structures of the Cys-loop 5-HT3A serotonin receptor (5HT3R) reconstituted into saposin-based lipid bilayer discs: a symmetric and an asymmetric apo state, and an asymmetric agonist-bound state. In comparison to previously published 5HT3R conformations in detergent, the lipid bilayer stabilises the receptor in a more tightly packed, 'coupled' state, involving a cluster of highly conserved residues. In consequence, the agonist-bound receptor conformation adopts a wide-open pore capable of conducting sodium ions in unbiased molecular dynamics (MD) simulations. Taken together, we provide a structural basis for the modulation of 5HT3R by the membrane environment, and a model for asymmetric activation of the receptor.

Entities:  

Year:  2021        PMID: 33594077     DOI: 10.1038/s41467-021-21016-7

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  76 in total

Review 1.  Emerging Molecular Mechanisms of Signal Transduction in Pentameric Ligand-Gated Ion Channels.

Authors:  Ákos Nemecz; Marie S Prevost; Anaïs Menny; Pierre-Jean Corringer
Journal:  Neuron       Date:  2016-05-04       Impact factor: 17.173

2.  The effect of cholesterol on agonist-induced flux in reconstituted acetylcholine receptor vesicles.

Authors:  A W Dalziel; E S Rollins; M G McNamee
Journal:  FEBS Lett       Date:  1980-12-29       Impact factor: 4.124

3.  Effects of lipids and detergents on the conformation of the nicotinic acetylcholine receptor from Torpedo californica.

Authors:  M P McCarthy; M A Moore
Journal:  J Biol Chem       Date:  1992-04-15       Impact factor: 5.157

4.  Impact of lipid raft integrity on 5-HT3 receptor function and its modulation by antidepressants.

Authors:  Caroline Nothdurfter; Sascha Tanasic; Barbara Di Benedetto; Gerhard Rammes; Eva-Maria Wagner; Thomas Kirmeier; Vanessa Ganal; Julia S Kessler; Theo Rein; Florian Holsboer; Rainer Rupprecht
Journal:  Neuropsychopharmacology       Date:  2010-03-03       Impact factor: 7.853

Review 5.  The structural basis of function in Cys-loop receptors.

Authors:  Andrew J Thompson; Henry A Lester; Sarah C R Lummis
Journal:  Q Rev Biophys       Date:  2010-09-20       Impact factor: 5.318

6.  A lipid-dependent uncoupled conformation of the acetylcholine receptor.

Authors:  Corrie J B daCosta; John E Baenziger
Journal:  J Biol Chem       Date:  2009-04-08       Impact factor: 5.157

7.  Reconstitution of acetylcholine receptor function in lipid vesicles of defined composition.

Authors:  E L Ochoa; A W Dalziel; M G McNamee
Journal:  Biochim Biophys Acta       Date:  1983-01-05

8.  Functional properties of the acetylcholine receptor incorporated in model lipid membranes. Differential effects of chain length and head group of phospholipids on receptor affinity states and receptor-mediated ion translocation.

Authors:  M Criado; H Eibl; F J Barrantes
Journal:  J Biol Chem       Date:  1984-07-25       Impact factor: 5.157

9.  Structure of a human synaptic GABAA receptor.

Authors:  Shaotong Zhu; Colleen M Noviello; Jinfeng Teng; Richard M Walsh; Jeong Joo Kim; Ryan E Hibbs
Journal:  Nature       Date:  2018-06-27       Impact factor: 49.962

10.  Cryo-EM structure of the human α1β3γ2 GABAA receptor in a lipid bilayer.

Authors:  Duncan Laverty; Rooma Desai; Tomasz Uchański; Simonas Masiulis; Wojciech J Stec; Tomas Malinauskas; Jasenko Zivanov; Els Pardon; Jan Steyaert; Keith W Miller; A Radu Aricescu
Journal:  Nature       Date:  2019-01-02       Impact factor: 49.962

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  11 in total

Review 1.  Membranes under the Magnetic Lens: A Dive into the Diverse World of Membrane Protein Structures Using Cryo-EM.

Authors:  Sarah J Piper; Rachel M Johnson; Denise Wootten; Patrick M Sexton
Journal:  Chem Rev       Date:  2022-07-18       Impact factor: 72.087

Review 2.  Recent Insight into Lipid Binding and Lipid Modulation of Pentameric Ligand-Gated Ion Channels.

Authors:  Anna Ananchenko; Toka O K Hussein; Deepansh Mody; Mackenzie J Thompson; John E Baenziger
Journal:  Biomolecules       Date:  2022-06-10

3.  Asymmetric CorA Gating Mechanism as Observed by Molecular Dynamics Simulations.

Authors:  Mariia Nemchinova; Josef Melcr; Tsjerk A Wassenaar; Siewert J Marrink; Albert Guskov
Journal:  J Chem Inf Model       Date:  2021-04-22       Impact factor: 4.956

4.  Structural basis for assembly of TRAPPII complex and specific activation of GTPase Ypt31/32.

Authors:  Chenchen Mi; Li Zhang; Guoqiang Huang; Guangcan Shao; Fan Yang; Xin You; Meng-Qiu Dong; Shan Sun; Sen-Fang Sui
Journal:  Sci Adv       Date:  2022-01-26       Impact factor: 14.136

5.  Markov state models of proton- and pore-dependent activation in a pentameric ligand-gated ion channel.

Authors:  Cathrine Bergh; Stephanie A Heusser; Rebecca Howard; Erik Lindahl
Journal:  Elife       Date:  2021-10-15       Impact factor: 8.140

Review 6.  Tapping into 5-HT3 Receptors to Modify Metabolic and Immune Responses.

Authors:  Helen Irving; Ilona Turek; Christine Kettle; Nor Yaakob
Journal:  Int J Mol Sci       Date:  2021-11-02       Impact factor: 5.923

7.  Mg2+-dependent conformational equilibria in CorA and an integrated view on transport regulation.

Authors:  Nicolai Tidemand Johansen; Marta Bonaccorsi; Tone Bengtsen; Andreas Haahr Larsen; Frederik Grønbæk Tidemand; Martin Cramer Pedersen; Pie Huda; Jens Berndtsson; Tamim Darwish; Nageshewar Rao Yepuri; Anne Martel; Thomas Günther Pomorski; Andrea Bertarello; Mark Sansom; Mikaela Rapp; Ramon Crehuet; Tobias Schubeis; Kresten Lindorff-Larsen; Guido Pintacuda; Lise Arleth
Journal:  Elife       Date:  2022-02-07       Impact factor: 8.713

8.  Conformational decoupling in acid-sensing ion channels uncovers mechanism and stoichiometry of PcTx1-mediated inhibition.

Authors:  Stephanie A Heusser; Christian B Borg; Janne M Colding; Stephan A Pless
Journal:  Elife       Date:  2022-02-14       Impact factor: 8.140

Review 9.  Druggable Lipid Binding Sites in Pentameric Ligand-Gated Ion Channels and Transient Receptor Potential Channels.

Authors:  Wayland W L Cheng; Mark J Arcario; John T Petroff
Journal:  Front Physiol       Date:  2022-01-04       Impact factor: 4.566

Review 10.  Recent Advances in Structure, Function, and Pharmacology of Class A Lipid GPCRs: Opportunities and Challenges for Drug Discovery.

Authors:  R N V Krishna Deepak; Ravi Kumar Verma; Yossa Dwi Hartono; Wen Shan Yew; Hao Fan
Journal:  Pharmaceuticals (Basel)       Date:  2021-12-22
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