Literature DB >> 33592174

Inhibitory CD161 receptor identified in glioma-infiltrating T cells by single-cell analysis.

Nathan D Mathewson1, Orr Ashenberg2, Itay Tirosh3, Simon Gritsch4, Elizabeth M Perez5, Sascha Marx6, Livnat Jerby-Arnon7, Rony Chanoch-Myers3, Toshiro Hara4, Alyssa R Richman4, Yoshinaga Ito6, Jason Pyrdol8, Mirco Friedrich8, Kathrin Schumann9, Michael J Poitras10, Prafulla C Gokhale10, L Nicolas Gonzalez Castro11, Marni E Shore4, Christine M Hebert4, Brian Shaw12, Heather L Cahill13, Matthew Drummond13, Wubing Zhang14, Olamide Olawoyin8, Hiroaki Wakimoto15, Orit Rozenblatt-Rosen16, Priscilla K Brastianos12, X Shirley Liu14, Pamela S Jones15, Daniel P Cahill15, Matthew P Frosch13, David N Louis13, Gordon J Freeman17, Keith L Ligon18, Alexander Marson19, E Antonio Chiocca20, David A Reardon21, Aviv Regev22, Mario L Suvà23, Kai W Wucherpfennig24.   

Abstract

T cells are critical effectors of cancer immunotherapies, but little is known about their gene expression programs in diffuse gliomas. Here, we leverage single-cell RNA sequencing (RNA-seq) to chart the gene expression and clonal landscape of tumor-infiltrating T cells across 31 patients with isocitrate dehydrogenase (IDH) wild-type glioblastoma and IDH mutant glioma. We identify potential effectors of anti-tumor immunity in subsets of T cells that co-express cytotoxic programs and several natural killer (NK) cell genes. Analysis of clonally expanded tumor-infiltrating T cells further identifies the NK gene KLRB1 (encoding CD161) as a candidate inhibitory receptor. Accordingly, genetic inactivation of KLRB1 or antibody-mediated CD161 blockade enhances T cell-mediated killing of glioma cells in vitro and their anti-tumor function in vivo. KLRB1 and its associated transcriptional program are also expressed by substantial T cell populations in other human cancers. Our work provides an atlas of T cells in gliomas and highlights CD161 and other NK cell receptors as immunotherapy targets.
Copyright © 2021 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  CD161; IDH-mutant gliomas; T cells; glioblastoma; single-cell RNA-seq

Mesh:

Substances:

Year:  2021        PMID: 33592174      PMCID: PMC7935772          DOI: 10.1016/j.cell.2021.01.022

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   66.850


  59 in total

1.  Full-length RNA-seq from single cells using Smart-seq2.

Authors:  Simone Picelli; Omid R Faridani; Asa K Björklund; Gösta Winberg; Sven Sagasser; Rickard Sandberg
Journal:  Nat Protoc       Date:  2014-01-02       Impact factor: 13.491

2.  PLK1 Inhibition Targets Myc-Activated Malignant Glioma Cells Irrespective of Mismatch Repair Deficiency-Mediated Acquired Resistance to Temozolomide.

Authors:  Fumi Higuchi; Alexandria L Fink; Juri Kiyokawa; Julie J Miller; Mara V A Koerner; Daniel P Cahill; Hiroaki Wakimoto
Journal:  Mol Cancer Ther       Date:  2018-09-14       Impact factor: 6.261

3.  Cutting edge: lectin-like transcript-1 is a ligand for the inhibitory human NKR-P1A receptor.

Authors:  David B Rosen; Jayaram Bettadapura; Mohammed Alsharifi; Porunelloor A Mathew; Hilary S Warren; Lewis L Lanier
Journal:  J Immunol       Date:  2005-12-15       Impact factor: 5.422

4.  Targeting Hypoxia-Inducible Factor 1α in a New Orthotopic Model of Glioblastoma Recapitulating the Hypoxic Tumor Microenvironment.

Authors:  Fares Nigim; Jill Cavanaugh; Anoop P Patel; William T Curry; Shin-ichi Esaki; Ekkehard M Kasper; Andrew S Chi; David N Louis; Robert L Martuza; Samuel D Rabkin; Hiroaki Wakimoto
Journal:  J Neuropathol Exp Neurol       Date:  2015-07       Impact factor: 3.685

5.  Enriched CD161high CCR6+ γδ T cells in the cerebrospinal fluid of patients with multiple sclerosis.

Authors:  Lucas Schirmer; Veit Rothhammer; Bernhard Hemmer; Thomas Korn
Journal:  JAMA Neurol       Date:  2013-03-01       Impact factor: 18.302

6.  Malignant glioma cells counteract antitumor immune responses through expression of lectin-like transcript-1.

Authors:  Patrick Roth; Michel Mittelbronn; Wolfgang Wick; Richard Meyermann; Marcos Tatagiba; Michael Weller
Journal:  Cancer Res       Date:  2007-04-15       Impact factor: 12.701

7.  An Integrative Model of Cellular States, Plasticity, and Genetics for Glioblastoma.

Authors:  Cyril Neftel; Julie Laffy; Mariella G Filbin; Toshiro Hara; Marni E Shore; Gilbert J Rahme; Alyssa R Richman; Dana Silverbush; McKenzie L Shaw; Christine M Hebert; John Dewitt; Simon Gritsch; Elizabeth M Perez; L Nicolas Gonzalez Castro; Xiaoyang Lan; Nicholas Druck; Christopher Rodman; Danielle Dionne; Alexander Kaplan; Mia S Bertalan; Julia Small; Kristine Pelton; Sarah Becker; Dennis Bonal; Quang-De Nguyen; Rachel L Servis; Jeremy M Fung; Ravindra Mylvaganam; Lisa Mayr; Johannes Gojo; Christine Haberler; Rene Geyeregger; Thomas Czech; Irene Slavc; Brian V Nahed; William T Curry; Bob S Carter; Hiroaki Wakimoto; Priscilla K Brastianos; Tracy T Batchelor; Anat Stemmer-Rachamimov; Maria Martinez-Lage; Matthew P Frosch; Ivan Stamenkovic; Nicolo Riggi; Esther Rheinbay; Michelle Monje; Orit Rozenblatt-Rosen; Daniel P Cahill; Anoop P Patel; Tony Hunter; Inder M Verma; Keith L Ligon; David N Louis; Aviv Regev; Bradley E Bernstein; Itay Tirosh; Mario L Suvà
Journal:  Cell       Date:  2019-07-18       Impact factor: 41.582

8.  Reprogramming of CTLs into natural killer-like cells in celiac disease.

Authors:  Bertrand Meresse; Shane A Curran; Cezary Ciszewski; Gerasim Orbelyan; Mala Setty; Govind Bhagat; Leanne Lee; Maria Tretiakova; Carol Semrad; Emily Kistner; Robert J Winchester; Veronique Braud; Lewis L Lanier; Daniel E Geraghty; Peter H Green; Stefano Guandalini; Bana Jabri
Journal:  J Exp Med       Date:  2006-05-08       Impact factor: 14.307

9.  CHOPCHOP v2: a web tool for the next generation of CRISPR genome engineering.

Authors:  Kornel Labun; Tessa G Montague; James A Gagnon; Summer B Thyme; Eivind Valen
Journal:  Nucleic Acids Res       Date:  2016-05-16       Impact factor: 16.971

10.  Sequestration of T cells in bone marrow in the setting of glioblastoma and other intracranial tumors.

Authors:  Pakawat Chongsathidkiet; Christina Jackson; Shohei Koyama; Franziska Loebel; Xiuyu Cui; S Harrison Farber; Karolina Woroniecka; Aladine A Elsamadicy; Cosette A Dechant; Hanna R Kemeny; Luis Sanchez-Perez; Tooba A Cheema; Nicholas C Souders; James E Herndon; Jean-Valery Coumans; Jeffrey I Everitt; Brian V Nahed; John H Sampson; Michael D Gunn; Robert L Martuza; Glenn Dranoff; William T Curry; Peter E Fecci
Journal:  Nat Med       Date:  2018-08-13       Impact factor: 53.440

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  57 in total

1.  Tissue-resident memory and circulating T cells are early responders to pre-surgical cancer immunotherapy.

Authors:  Adrienne M Luoma; Shengbao Suo; Yifan Wang; Lauren Gunasti; Caroline B M Porter; Nancy Nabilsi; Jenny Tadros; Andrew P Ferretti; Sida Liao; Cagan Gurer; Yu-Hui Chen; Shana Criscitiello; Cora A Ricker; Danielle Dionne; Orit Rozenblatt-Rosen; Ravindra Uppaluri; Robert I Haddad; Orr Ashenberg; Aviv Regev; Eliezer M Van Allen; Gavin MacBeath; Jonathan D Schoenfeld; Kai W Wucherpfennig
Journal:  Cell       Date:  2022-07-07       Impact factor: 66.850

Review 2.  Immune checkpoint modulators in cancer immunotherapy: recent advances and emerging concepts.

Authors:  Yuchen Wang; Hao Zhang; Chao Liu; Zeyu Wang; Wantao Wu; Nan Zhang; Longbo Zhang; Jason Hu; Peng Luo; Jian Zhang; Zaoqu Liu; Yun Peng; Zhixiong Liu; Lanhua Tang; Quan Cheng
Journal:  J Hematol Oncol       Date:  2022-08-17       Impact factor: 23.168

Review 3.  Epigenetic regulation of T cell exhaustion.

Authors:  Julia A Belk; Bence Daniel; Ansuman T Satpathy
Journal:  Nat Immunol       Date:  2022-05-27       Impact factor: 31.250

Review 4.  Mechanism and therapeutic potential of tumor-immune symbiosis in glioblastoma.

Authors:  Lizhi Pang; Fatima Khan; Amy B Heimberger; Peiwen Chen
Journal:  Trends Cancer       Date:  2022-05-24

Review 5.  Brain cancer stem cells: resilience through adaptive plasticity and hierarchical heterogeneity.

Authors:  Ryan C Gimple; Kailin Yang; Matthew E Halbert; Sameer Agnihotri; Jeremy N Rich
Journal:  Nat Rev Cancer       Date:  2022-06-16       Impact factor: 69.800

Review 6.  Targeting Neuroinflammation in Brain Cancer: Uncovering Mechanisms, Pharmacological Targets, and Neuropharmaceutical Developments.

Authors:  Mahmoud S Alghamri; Brandon L McClellan; Carson S Hartlage; Santiago Haase; Syed Mohd Faisal; Rohit Thalla; Ali Dabaja; Kaushik Banerjee; Stephen V Carney; Anzar A Mujeeb; Michael R Olin; James J Moon; Anna Schwendeman; Pedro R Lowenstein; Maria G Castro
Journal:  Front Pharmacol       Date:  2021-05-18       Impact factor: 5.988

Review 7.  T cell dysfunction in glioblastoma: a barrier and an opportunity for the development of successful immunotherapies.

Authors:  Josephina A Jansen; Antonio Omuro; Liliana E Lucca
Journal:  Curr Opin Neurol       Date:  2021-12-01       Impact factor: 5.710

8.  Interactions between cancer cells and immune cells drive transitions to mesenchymal-like states in glioblastoma.

Authors:  Toshiro Hara; Rony Chanoch-Myers; Nathan D Mathewson; Chad Myskiw; Lyla Atta; Lillian Bussema; Stephen W Eichhorn; Alissa C Greenwald; Gabriela S Kinker; Christopher Rodman; L Nicolas Gonzalez Castro; Hiroaki Wakimoto; Orit Rozenblatt-Rosen; Xiaowei Zhuang; Jean Fan; Tony Hunter; Inder M Verma; Kai W Wucherpfennig; Aviv Regev; Mario L Suvà; Itay Tirosh
Journal:  Cancer Cell       Date:  2021-06-03       Impact factor: 38.585

Review 9.  Glial and myeloid heterogeneity in the brain tumour microenvironment.

Authors:  Brian M Andersen; Camilo Faust Akl; Michael A Wheeler; E Antonio Chiocca; David A Reardon; Francisco J Quintana
Journal:  Nat Rev Cancer       Date:  2021-09-28       Impact factor: 69.800

10.  A Pan-Cancer Analysis of CD161, a Potential New Immune Checkpoint.

Authors:  Xiaohan Zhou; Jun Du; Chengdong Liu; Hanyi Zeng; Yuting Chen; Li Liu; Dehua Wu
Journal:  Front Immunol       Date:  2021-07-09       Impact factor: 7.561

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