Literature DB >> 33572950

A Forensic Detection Method for Hallucinogenic Mushrooms via High-Resolution Melting (HRM) Analysis.

Xiaochun Zhang1,2, Huan Yu1,2, Qi Yang1,2, Ziwei Wang1,2, Ruocheng Xia2,3, Chong Chen2,4, Yiling Qu1,2, Rui Tan1,2, Yan Shi2, Ping Xiang2, Suhua Zhang2, Chengtao Li1,2.   

Abstract

In recent years, trafficking and abuse of hallucinogenic mushrooms have become a serious social problem. It is therefore imperative to identify hallucinogenic mushrooms of the genus Psilocybe for national drug control legislation. An internal transcribed spacer (ITS) is a DNA barcoding tool utilized for species identification. Many methods have been used to discriminate the ITS region, but they are often limited by having a low resolution. In this study, we sought to analyze the ITS and its fragments, ITS1 and ITS2, by using high-resolution melting (HRM) analysis, which is a rapid and sensitive method for evaluating sequence variation within PCR amplicons. The ITS HRM assay was tested for specificity, reproducibility, sensitivity, and the capacity to analyze mixture samples. It was shown that the melting temperatures of the ITS, ITS1, and ITS2 of Psilocybe cubensis were 83.72 ± 0.01, 80.98 ± 0.06, and 83.46 ± 0.08 °C, and for other species, we also obtained species-specific results. Finally, we performed ITS sequencing to validate the presumptive taxonomic identity of our samples, and the sequencing output significantly supported our HRM data. Taken together, these results indicate that the HRM method can quickly distinguish the DNA barcoding of Psilocybe cubensis and other fungi, which can be utilized for drug trafficking cases and forensic science.

Entities:  

Keywords:  DNA barcoding; Psilocybe cubensis; high-resolution melting (HRM); internal transcribed spacer (ITS); polymerase chain reaction (PCR)

Year:  2021        PMID: 33572950      PMCID: PMC7911181          DOI: 10.3390/genes12020199

Source DB:  PubMed          Journal:  Genes (Basel)        ISSN: 2073-4425            Impact factor:   4.096


  25 in total

Review 1.  Psychoactive tryptamines from basidiomycetes.

Authors:  M Wurst; R Kysilka; M Flieger
Journal:  Folia Microbiol (Praha)       Date:  2002       Impact factor: 2.099

2.  Lower level relationships in the mushroom genus Cortinarius (Basidiomycota, Agaricales): a comparison of RPB1, RPB2, and ITS phylogenies.

Authors:  T G Frøslev; P B Matheny; D S Hibbett
Journal:  Mol Phylogenet Evol       Date:  2005-08-08       Impact factor: 4.286

3.  Rapid species identification of cooked poisonous mushrooms by using real-time PCR.

Authors:  Kazuhiko Maeta; Tomoya Ochi; Keisuke Tokimoto; Norihiro Shimomura; Nitaro Maekawa; Nobuhisa Kawaguchi; Makoto Nakaya; Yutaka Kitamoto; Tadanori Aimi
Journal:  Appl Environ Microbiol       Date:  2008-03-31       Impact factor: 4.792

Review 4.  The search for the fungal tree of life.

Authors:  David J McLaughlin; David S Hibbett; François Lutzoni; Joseph W Spatafora; Rytas Vilgalys
Journal:  Trends Microbiol       Date:  2009-09-24       Impact factor: 17.079

5.  Psychedelic fungus (Psilocybe sp.) authentication in a case of illegal drug traffic: sporological, molecular analysis and identification of the psychoactive substance.

Authors:  Jaime Solano; Leonardo Anabalón; Sylvia Figueroa; Cristian Lizama; Luis Chávez Reyes; David Gangitano
Journal:  Sci Justice       Date:  2018-08-21       Impact factor: 2.124

6.  The determination of psilocin and psilocybin in hallucinogenic mushrooms by HPLC utilizing a dual reagent acidic potassium permanganate and tris(2,2'-bipyridyl)ruthenium(II) chemiluminescence detection system.

Authors:  Nicole Anastos; Simon W Lewis; Neil W Barnett; D Noel Sims
Journal:  J Forensic Sci       Date:  2006-01       Impact factor: 1.832

7.  Comparison of ISSR and RAPD markers to characterize three Chilean Nothofagus species.

Authors:  C. Mattioni; M. Casasoli; M. Gonzalez; R. Ipinza; F. Villani
Journal:  Theor Appl Genet       Date:  2002-02-08       Impact factor: 5.699

8.  Fluorescent Random Amplified Microsatellites (F-RAMS) analysis of mushrooms as a forensic investigative tool.

Authors:  Beatrice Kallifatidis; Jan Borovička; Jana Stránská; Jiří Drábek; Deetta K Mills
Journal:  Forensic Sci Int Genet       Date:  2013-11-02       Impact factor: 4.882

9.  Dynamic time warping assessment of high-resolution melt curves provides a robust metric for fungal identification.

Authors:  Sha Lu; Gordana Mirchevska; Sayali S Phatak; Dongmei Li; Janos Luka; Richard A Calderone; William A Fonzi
Journal:  PLoS One       Date:  2017-03-06       Impact factor: 3.240

10.  Effectiveness of ITS and sub-regions as DNA barcode markers for the identification of Basidiomycota (Fungi).

Authors:  Fernanda Badotti; Francislon Silva de Oliveira; Cleverson Fernando Garcia; Aline Bruna Martins Vaz; Paula Luize Camargos Fonseca; Laila Alves Nahum; Guilherme Oliveira; Aristóteles Góes-Neto
Journal:  BMC Microbiol       Date:  2017-02-23       Impact factor: 3.605

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