Literature DB >> 24528576

Fluorescent Random Amplified Microsatellites (F-RAMS) analysis of mushrooms as a forensic investigative tool.

Beatrice Kallifatidis1, Jan Borovička2, Jana Stránská3, Jiří Drábek3, Deetta K Mills4.   

Abstract

The capability of Fluorescent Random Amplified Microsatellites (F-RAMS) to profile hallucinogenic mushrooms to species and sub-species level was assessed. Fifteen samples of Amanita rubescens and 22 samples of other hallucinogenic and non-hallucinogenic mushrooms of the genera Amanita and Psilocybe were profiled using two fluorescently-labeled, 5'degenerate primers, 5'-6FAM-SpC3-DD (CCA)5 and 5'-6FAM-SpC3-DHB (CGA)5, which target different microsatellite repeat regions. Among the two primers, 5'-6FAM-SpC3-DHB (CGA)5 provided more reliable data for identification purposes, by grouping samples of the same species and clustering closely related species together in a dendrogram based on amplicon similarities. A high degree of intra-specific variation between the 15 A. rubescens samples was shown with both primers and the amplicons generated for all A. rubescens samples were organized into three classes of amplicons (discriminant, private, and marker) based on their individualizing potential.
Copyright © 2013 Elsevier Ireland Ltd. All rights reserved.

Entities:  

Keywords:  DNA profiling; Hallucinogenic mushrooms; Random Amplified Microsatellites

Mesh:

Substances:

Year:  2013        PMID: 24528576     DOI: 10.1016/j.fsigen.2013.10.009

Source DB:  PubMed          Journal:  Forensic Sci Int Genet        ISSN: 1872-4973            Impact factor:   4.882


  3 in total

1.  Practical aspects of genetic identification of hallucinogenic and other poisonous mushrooms for clinical and forensic purposes.

Authors:  Marek Kowalczyk; Andrzej Sekuła; Piotr Mleczko; Zofia Olszowy; Anna Kujawa; Szymon Zubek; Tomasz Kupiec
Journal:  Croat Med J       Date:  2015-02       Impact factor: 1.351

2.  A Forensic Detection Method for Hallucinogenic Mushrooms via High-Resolution Melting (HRM) Analysis.

Authors:  Xiaochun Zhang; Huan Yu; Qi Yang; Ziwei Wang; Ruocheng Xia; Chong Chen; Yiling Qu; Rui Tan; Yan Shi; Ping Xiang; Suhua Zhang; Chengtao Li
Journal:  Genes (Basel)       Date:  2021-01-29       Impact factor: 4.096

3.  Phylogenetic and chemical studies in the potential psychotropic species complex of Psilocybe atrobrunnea with taxonomic and nomenclatural notes.

Authors:  J Borovička; M Oborník; J Stříbrný; M E Noordeloos; L A Parra Sánchez; M Gryndler
Journal:  Persoonia       Date:  2014-10-21       Impact factor: 11.051

  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.