Literature DB >> 33562593

A Three-Dimensional Model of the Yeast Transmembrane Sensor Wsc1 Obtained by SMA-Based Detergent-Free Purification and Transmission Electron Microscopy.

Natalia Voskoboynikova1, Maria Karlova2, Rainer Kurre3, Armen Y Mulkidjanian1,4, Konstantin V Shaitan2,5, Olga S Sokolova2,6, Heinz-Jürgen Steinhoff1, Jürgen J Heinisch7.   

Abstract

The cell wall sensor Wsc1 belongs to a small family of transmembrane proteins, which are crucial to sustain cell integrity in yeast and other fungi. Wsc1 acts as a mechanosensor of the cell wall integrity (CWI) signal transduction pathway which responds to external stresses. Here we report on the purification of Wsc1 by its trapping in water-soluble polymer-stabilized lipid nanoparticles, obtained with an amphipathic styrene-maleic acid (SMA) copolymer. The latter was employed to transfer tagged sensors from their native yeast membranes into SMA/lipid particles (SMALPs), which allows their purification in a functional state, i.e., avoiding denaturation. The SMALPs composition was characterized by fluorescence correlation spectroscopy, followed by two-dimensional image acquisition from single particle transmission electron microscopy to build a three-dimensional model of the sensor. The latter confirms that Wsc1 consists of a large extracellular domain connected to a smaller intracellular part by a single transmembrane domain, which is embedded within the hydrophobic moiety of the lipid bilayer. The successful extraction of a sensor from the yeast plasma membrane by a detergent-free procedure into a native-like membrane environment provides new prospects for in vitro structural and functional studies of yeast plasma proteins which are likely to be applicable to other fungi, including plant and human pathogens.

Entities:  

Keywords:  3D reconstruction; SMALP; Wsc1; detergent-free extraction; fluorescence correlation spectroscopy; membrane sensor; transmission electron microscopy

Year:  2021        PMID: 33562593      PMCID: PMC7915640          DOI: 10.3390/jof7020118

Source DB:  PubMed          Journal:  J Fungi (Basel)        ISSN: 2309-608X


  62 in total

1.  Maximum-likelihood multi-reference refinement for electron microscopy images.

Authors:  Sjors H W Scheres; Mikel Valle; Rafael Nuñez; Carlos O S Sorzano; Roberto Marabini; Gabor T Herman; Jose-Maria Carazo
Journal:  J Mol Biol       Date:  2005-04-22       Impact factor: 5.469

2.  NPFXD-mediated endocytosis is required for polarity and function of a yeast cell wall stress sensor.

Authors:  Hai Lan Piao; Iara M P Machado; Gregory S Payne
Journal:  Mol Biol Cell       Date:  2006-10-25       Impact factor: 4.138

3.  Diffusion coefficient measurements in microfluidic devices.

Authors:  Christopher T Culbertson; Stephen C Jacobson; J Michael Ramsey
Journal:  Talanta       Date:  2002-02-11       Impact factor: 6.057

4.  Protter: interactive protein feature visualization and integration with experimental proteomic data.

Authors:  Ulrich Omasits; Christian H Ahrens; Sebastian Müller; Bernd Wollscheid
Journal:  Bioinformatics       Date:  2013-10-24       Impact factor: 6.937

5.  Formation of Lipid-Bilayer Nanodiscs by Diisobutylene/Maleic Acid (DIBMA) Copolymer.

Authors:  Abraham Olusegun Oluwole; Johannes Klingler; Bartholomäus Danielczak; Jonathan Oyebamiji Babalola; Carolyn Vargas; Georg Pabst; Sandro Keller
Journal:  Langmuir       Date:  2017-12-06       Impact factor: 3.882

6.  High resolution single particle refinement in EMAN2.1.

Authors:  James M Bell; Muyuan Chen; Philip R Baldwin; Steven J Ludtke
Journal:  Methods       Date:  2016-02-27       Impact factor: 3.608

Review 7.  Architecture and biosynthesis of the Saccharomyces cerevisiae cell wall.

Authors:  Peter Orlean
Journal:  Genetics       Date:  2012-11       Impact factor: 4.562

8.  New and continuing developments at PROSITE.

Authors:  Christian J A Sigrist; Edouard de Castro; Lorenzo Cerutti; Béatrice A Cuche; Nicolas Hulo; Alan Bridge; Lydie Bougueleret; Ioannis Xenarios
Journal:  Nucleic Acids Res       Date:  2012-11-17       Impact factor: 16.971

9.  Mutational analysis of the cytoplasmic domain of the Wsc1 cell wall stress sensor.

Authors:  Heather A Vay; Bevin Philip; David E Levin
Journal:  Microbiology (Reading)       Date:  2004-10       Impact factor: 2.777

10.  Isolation of yeast complex IV in native lipid nanodiscs.

Authors:  Irina A Smirnova; Dan Sjöstrand; Fei Li; Markus Björck; Jacob Schäfer; Henrik Östbye; Martin Högbom; Christoph von Ballmoos; Gabriel C Lander; Pia Ädelroth; Peter Brzezinski
Journal:  Biochim Biophys Acta       Date:  2016-09-13
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  5 in total

Review 1.  Mechanisms of Formation, Structure, and Dynamics of Lipoprotein Discs Stabilized by Amphiphilic Copolymers: A Comprehensive Review.

Authors:  Philipp S Orekhov; Marine E Bozdaganyan; Natalia Voskoboynikova; Armen Y Mulkidjanian; Maria G Karlova; Anna Yudenko; Alina Remeeva; Yury L Ryzhykau; Ivan Gushchin; Valentin I Gordeliy; Olga S Sokolova; Heinz-Jürgen Steinhoff; Mikhail P Kirpichnikov; Konstantin V Shaitan
Journal:  Nanomaterials (Basel)       Date:  2022-01-23       Impact factor: 5.076

2.  Structure of the Yeast Cell Wall Integrity Sensor Wsc1 Reveals an Essential Role of Surface-Exposed Aromatic Clusters.

Authors:  Philipp Schöppner; Anne Pia Lutz; Bernard Johannes Lutterbach; Stefan Brückner; Lars-Oliver Essen; Hans-Ulrich Mösch
Journal:  J Fungi (Basel)       Date:  2022-04-08

Review 3.  Biophysical Characterization of Membrane Proteins Embedded in Nanodiscs Using Fluorescence Correlation Spectroscopy.

Authors:  Matthew J Laurence; Timothy S Carpenter; Ted A Laurence; Matthew A Coleman; Megan Shelby; Chao Liu
Journal:  Membranes (Basel)       Date:  2022-03-31

Review 4.  Detergent-Free Isolation of Membrane Proteins and Strategies to Study Them in a Near-Native Membrane Environment.

Authors:  Bankala Krishnarjuna; Ayyalusamy Ramamoorthy
Journal:  Biomolecules       Date:  2022-08-04

Review 5.  Biological insights from SMA-extracted proteins.

Authors:  Lucas Unger; Alejandro Ronco-Campaña; Philip Kitchen; Roslyn M Bill; Alice J Rothnie
Journal:  Biochem Soc Trans       Date:  2021-06-30       Impact factor: 5.407

  5 in total

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