Literature DB >> 33555093

Yeast translation elongation factor eEF3 promotes late stages of tRNA translocation.

Namit Ranjan1, Agnieszka A Pochopien2,3, Colin Chih-Chien Wu4, Bertrand Beckert3, Sandra Blanchet1, Rachel Green4,5, Marina V Rodnina1, Daniel N Wilson2,3.   

Abstract

In addition to the conserved translation elongation factors eEF1A and eEF2, fungi require a third essential elongation factor, eEF3. While eEF3 has been implicated in tRNA binding and release at the ribosomal A and E sites, its exact mechanism of action is unclear. Here, we show that eEF3 acts at the mRNA-tRNA translocation step by promoting the dissociation of the tRNA from the E site, but independent of aminoacyl-tRNA recruitment to the A site. Depletion of eEF3 in vivo leads to a general slowdown in translation elongation due to accumulation of ribosomes with an occupied A site. Cryo-EM analysis of native eEF3-ribosome complexes shows that eEF3 facilitates late steps of translocation by favoring non-rotated ribosomal states, as well as by opening the L1 stalk to release the E-site tRNA. Additionally, our analysis provides structural insights into novel translation elongation states, enabling presentation of a revised yeast translation elongation cycle.
© 2021 The Authors. Published under the terms of the CC BY 4.0 license.

Entities:  

Keywords:  ABC ATPase; E-site tRNA; L1 stalk; cryo-EM; eEF3

Year:  2021        PMID: 33555093     DOI: 10.15252/embj.2020106449

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  5 in total

1.  In Vitro Reconstitution of Yeast Translation System Capable of Synthesizing Long Polypeptide and Recapitulating Programmed Ribosome Stalling.

Authors:  Riku Nagai; Yichen Xu; Chang Liu; Ayaka Shimabukuro; Nono Takeuchi-Tomita
Journal:  Methods Protoc       Date:  2021-07-04

2.  Conserved heterodimeric GTPase Rbg1/Tma46 promotes efficient translation in eukaryotic cells.

Authors:  Fuxing Zeng; Xin Li; Melissa Pires-Alves; Xin Chen; Christopher W Hawk; Hong Jin
Journal:  Cell Rep       Date:  2021-10-26       Impact factor: 9.995

Review 3.  Ribosome states signal RNA quality control.

Authors:  Karole N D'Orazio; Rachel Green
Journal:  Mol Cell       Date:  2021-03-12       Impact factor: 17.970

4.  Frameshifting at collided ribosomes is modulated by elongation factor eEF3 and by integrated stress response regulators Gcn1 and Gcn20.

Authors:  Lisa Houston; Evan M Platten; Sara M Connelly; Jiyu Wang; Elizabeth J Grayhack
Journal:  RNA       Date:  2021-12-16       Impact factor: 4.942

5.  Structural basis of ABCF-mediated resistance to pleuromutilin, lincosamide, and streptogramin A antibiotics in Gram-positive pathogens.

Authors:  Caillan Crowe-McAuliffe; Victoriia Murina; Kathryn Jane Turnbull; Marje Kasari; Merianne Mohamad; Christine Polte; Hiraku Takada; Karolis Vaitkevicius; Jörgen Johansson; Zoya Ignatova; Gemma C Atkinson; Alex J O'Neill; Vasili Hauryliuk; Daniel N Wilson
Journal:  Nat Commun       Date:  2021-06-11       Impact factor: 14.919

  5 in total

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