Literature DB >> 33554363

Diagnosis value of SARS-CoV-2 antigen/antibody combined testing using rapid diagnostic tests at hospital admission.

Nicolas Veyrenche1, Karine Bolloré1, Amandine Pisoni1, Anne-Sophie Bedin1, Anne-Marie Mondain2, Jacques Ducos2, Michel Segondy1, Brigitte Montes2, Patrick Pastor2, David Morquin3,4, Alain Makinson3,4, Vincent Le Moing3,4, Philippe Van de Perre1, Vincent Foulongne1, Edouard Tuaillon1.   

Abstract

The implementation of rapid diagnostic tests (RDTs) may enhance the efficiency of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) testing, as RDTs are widely accessible and easy to use. The aim of this study was to evaluate the performance of a diagnosis strategy based on a combination of antigen and immunoglobulin M (IgM) or immunoglobulin G (IgG) serological RDTs. Plasma and nasopharyngeal samples were collected between 14 March and 11 April 2020 at hospital admission from 45 patients with reverse transcription polymerase chain reaction (RT-PCR) confirmed COVID-19 and 20 negative controls. SARS-CoV-2 antigen (Ag) was assessed in nasopharyngeal swabs using the Coris Respi-Strip. For IgM/IgG detection, SureScreen Diagnostics and Szybio Biotech RDTs were used in addition to laboratory assays (Abbott Alinity i SARS-CoV-2 IgG and Theradiag COVID-19 IgM enzyme-linked immunosorbent assay). Using the Ag RDT, 13 out of 45 (29.0%) specimens tested positive, the sensitivity was 87.0% for cycle threshold (Ct ) values ≤25% and 0% for Ct values greater than 25. IgG detection was associated with high Ct values and the amount of time after the onset of symptoms. The profile of isolated IgM on RDTs was more frequently observed during the first and second week after the onset of symptoms. The combination of Ag and IgM/IgG RDTs enabled the detection of up to 84.0% of COVID-19 confirmed cases at hospital admission. Antigen and antibody-based RDTs showed suboptimal performances when used alone. However when used in combination, they are able to identify most COVID-19 patients admitted in an emergency department.
© 2021 Wiley Periodicals LLC.

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Keywords:  SARS-CoV-2 antibody; SARS-CoV-2 antigen; coronavirus disease-19 (COVID-19); diagnosis; rapid diagnostic tests

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Year:  2021        PMID: 33554363      PMCID: PMC8013599          DOI: 10.1002/jmv.26855

Source DB:  PubMed          Journal:  J Med Virol        ISSN: 0146-6615            Impact factor:   20.693


INTRODUCTION

Reported for the first time in December 2019, coronavirus disease 2019 (COVID‐19) has become a major public health concern worldwide. Currently, clinical management of COVID‐19 is mainly based on the prevention of transmission, viral tests, and supportive care. Wide access to severe acute respiratory syndrome coronavirus 2 (SARS‐CoV‐2) testing is one of the keys to protecting populations. To be efficient, diagnostic assays must be accessible in different settings, ranging from the hospital to the community level, and from low to high incomes countries. Reverse transcriptase polymerase chain reaction (RT‐PCR) for the detection of SARS‐CoV‐2 RNA in upper and lower respiratory tract specimens (nasopharyngeal swab, throat swab, and sputum) is the gold standard to confirm COVID‐19. RT‐PCR tests have an overall sensitivity estimated around 70.0% in nasopharyngeal sampling with a high specificity. RT‐PCR is ideal for the diagnosis of COVID‐19 during the first week after the onset of symptoms because the viral load is high during this period. Beyond Day 14, when the viral load is low or undetectable, the performance of RT‐PCR diminishes. In such situations, serological tests may help to confirm a COVID‐19 diagnosis in individuals with a high clinical suspicion but who tested negative for SARS‐CoV‐2 RNA. Both nucleic acid tests and automated serological tests require sample collection, transportation, and laboratory analysis, leading to a delayed response and limiting the efficiency of SARS‐CoV‐2 testing strategies. Furthermore, insufficient access to nearby laboratory facilities is a major concern in intermediate and low‐income countries. A diagnostic test is characterized not only by its analytical performance, mainly estimated by sensitivity (Se) and specificity (Sp) but also by its overall accessibility. The implementation of rapid diagnostic tests (RDTs) in the diagnosis of COVID‐19 could have significant benefits by enhancing the efficiency of large testing strategies. RTDs are useful devices that facilitate testing outside of laboratory settings, a capability needed for hard to reach populations. In addition, RTDs deliver results in a shorter amount of time than RT‐PCR. This time saving is important for the identification, isolation and provision of appropriate clinical care to patients with COVID‐19. RTDs also reduce overloads in emergency departments. COVID‐19 RDTs are based on the detection of either SARS‐CoV‐2 antigen in respiratory specimens or anti‐SARS‐CoV‐2 antibodies in whole blood or plasma or serum. Experience with RDTs used to detect antigens from other respiratory viruses in respiratory samples suggests that the sensitivity of these tests is lower than that of nucleic acid tests, ranging from 34.0% to 80.0%. Recent publications have confirmed that COVID‐19 RDTs are considerably less sensitive than molecular tests, and may therefore generate false negative results. Antigen detection is mainly dependant on the viral concentration, hence most specimens with high viral concentrations test positive for antigen. , , In contrast to RDTs based on Ag detection, RDTs that detects anti‐SARS‐CoV‐2 antibodies are widely available, and a very large number have been approved by the FDA and CE. Although weak or absent humoral responses have been reported, especially in mild and moderate forms of COVID‐19, most patients develop an antibody response within the first two weeks of COVID‐19. , , Serologic assays also can be useful in conjunction with molecular assays for the clinical assessment of persons who present themselves for testing long after the onset of symptoms. While RDTs might constitute a simple screening method, they have shown limitations in the early phase of acute infections due to the time required for an antibody response. Consequently, COVID‐19 diagnosis based on immunoglobulin M (IgM) and immunoglobulin G (IgG) detection is often delayed to the second phase of the disease, when some opportunities for therapy and prevention of SARS‐CoV‐2 transmission already have been lost. Due to the overall performance of the tests, World Health Organization (WHO) and FDA do not recommend the use of Ag or antibody‐detecting RDTs as the sole basis for the diagnosis of infection, but are encouraging research studies to establish their usefulness. Diagnostic algorithms based on Ag plus antibodies detection using RDTs need to be compared to the molecular techniques which currently are the gold standard for COVID‐19 diagnosis. The aim of this study was to evaluate the performance of a combination of antigen and serological RDTs to diagnose COVID‐19 in hospitalized patients who tested positive for SARS‐CoV‐2 RNA using RT‐PCR.

MATERIALS AND METHODS

Plasma and nasopharyngeal samples were collected from patients admitted in Montpellier University hospitals between March 11 and April 11, 2020 who tested positive for SARS‐CoV‐2 RNA. Patient characteristics are detailed in Table 1. The estimated date of the onset of symptoms was recorded and ranged from 1 to 20 days before hospital admission. The severity of COVID‐19 was defined by WHO guidelines. Controls consisted of samples collected in the pre‐COVID‐19 period (2017–2018) in patients and stored at −80°C until used (DC‐2015‐2473). The cohort received an institutional ethics committee approval (CPP Ile de France III, n°2020‐A00935−34; ClinicalTrials. gov Identifier: NCT04347850). All tests were performed in the laboratory of Virology.
Table 1

Patient characteristics

C t ≤ 25 a 25 < C t < 35 a C t ≥ 35 a Controls b
Number of patients15151520
Age (median, SD)66 (48−84)63 (50−76)58 (49−67)64 (35−93)
Sexe ratio M/F9/613/210/510/10
Days postinfection (median, SD)7 (4−10)8 (4−12)11 (7−15)
Severe COVID‐19989

Note: All serological and antigen assays were performed in strict accordance with the manufacturer's instructions.

Abbreviation: COVID‐19, coronavirus disease 2019.

Cycle threshold (C t) values recorded by RT‐PCR methods Allplex 2019‐nCoV Assay Seegene.

Controls consisted of samples collected in the pre‐COVID‐19 period (2017–2018).

Patient characteristics Note: All serological and antigen assays were performed in strict accordance with the manufacturer's instructions. Abbreviation: COVID‐19, coronavirus disease 2019. Cycle threshold (C t) values recorded by RT‐PCR methods Allplex 2019‐nCoV Assay Seegene. Controls consisted of samples collected in the pre‐COVID‐19 period (2017–2018).

Reverse transcription polymerase chain reaction method

The samples were inactivated by ATL lysis buffer in BSL‐2 laboratory. Automated nucleic acids extraction and PCR setup were performed by Seegene STARlet IVD. The Allplex 2019‐nCoV Assay (Seegene) was used as the reference method to confirm SARS‐CoV‐2 infection. This RT‐PCR simultaneously amplifies three different genes: the SARS‐CoV‐2 RNA‐dependent RNA polymerase (RdRP) gene in the Cal Red 610 channel, the SARS‐CoV‐2 nucleocapsid (N) gene in the Quasar 670 channel, and the Sarbecovirus envelope (E) gene in the FAM channel. The result represents the positive result for the E gene of Sarbecovirus, the RdRP gene and the N gene of COVID‐19, respectively. Nasopharyngeal samples were tested prospectively within a few hours after collection and without any cooling or freezing step. Swabs were collected in various transport media (eSwab COPAN Amies 1 ml, ∑‐Transwab liquid Amies, viral transport medium tube VTM‐M 2.0 ml). A 200 µl nasopharyngeal sample was added in 200 µl tissue lysis buffer (ATL) to inactivate the virus. These 400 µl of sample were extracted and amplified by multiplex real time RT‐PCR. COVID‐19 confirmed‐subjects were grouped according to the average value of the cycle threshold (C t), C t ≤ 25, 25 < C t < 35 and C t ≥ 35.

Laboratory immunoglobulin G and immunoglobulin M immunoassays

Plasma samples were tested using the SARS‐CoV‐2 IgG immunoassay on the Alinity i system (Abbott). The SARS‐CoV‐2 assay is a chemiluminescent microparticle immunoassay intended for the qualitative detection of SARS‐CoV‐2 nucleoprotein IgG. The cut‐off value for a positive result was defined by the manufacturer's instructions: a ratio less than 1.4 calculated index (S/C) is considered negative and a ratio ≥1.4 is considered positive. Anti‐SARS‐CoV‐2 IgM were not assessed by the Alinity i platform since the assay was not available at the time of the study. IgM directed against SARS‐CoV‐2 protein S were detected using the ELISA COVID‐19 THERA02 IgM assays (Theradiag). The IgM positive cut‐off is ratio ≥1. All tests were performed according to the manufacturer's instructions.

Rapid diagnostic tests

The Coris COVID‐19 Ag Respi‐Strip (BioConcept), was used to test Ag in nasopharyngeal specimens (Swab with viral transport media). The assay was commercialized since the first months of the SARS‐CoV‐2 pandemic in Europe. This test is based on the detection of SARS‐CoV‐2 antigens in nasopharyngeal samples. This lateral flow assay uses colloidal gold nanoparticles sensitized with monoclonal antibodies directed against highly conserved SARS‐CoV‐2 nucleoprotein antigens. Two SARS‐CoV‐2 antibody lateral flow assays were evaluated. These RDTs use a chromatographic immunoassay format and are dedicated to the qualitative detection of IgG and IgM antibodies directed against SARS‐CoV‐2 in human whole blood, serum and plasma. The SureScreen Diagnostics Ltd COVID‐19 IgG/IgM rapid test requires 10 µl of sample collected and 80 µl of buffer. The Szybio Biotech Joint Stock Co., Ltd. SARS‐CoV‐2 IgM/IgG Antibody Assay Kit requires 10 µl of serum, plasma or 20 µl of whole blood sample and 60 µl of buffer. During testing, the specimen reacts with SARS‐CoV‐2 antigen‐coated particles in the test cassette. In the presence of a control signal, any signal visible in the IgM and/or IgG position at 15 min on the test line, even a weak one, must be interpreted as positive.

Statistical analyses

The experimental data were summarized by number and percentage for categorical variable, that is, positive and negative results. The analysis considers 45 patients; for each one we have a nasopharyngeal sample and a plasma sample collected on the same day. The 45 nasopharyngeal samples were positive for SARS‐CoV‐2 by RT‐PCR. The controls consisted of 20 nasopharyngeal and plasma samples collected in the pre‐COVID‐19 period (2017–2018). COVID‐19 confirmed patients were grouped in three categories according to RT‐PCR values: C t ≤ 25, 25 < C t < 35, and C t ≥ 35. Quantitative variables with non‐normal distribution (C t values, IgM ratio or IgG ratio) were compared between the different groups using Mann–Whitney U test. Because the distribution was non‐normal and total of the discordant pairs was too low, Exact binomial's test was used to compare the performance of diagnostic tests. The median and interquartile range (IQR) were used for analysis distribution of C t values because this variable follows a non‐normal distribution. Analyses were performed using GraphPad Prism 8.0 (GraphPad Prism Software Inc.).

RESULTS

Nasopharyngeal and plasma samples were tested for SARS‐CoV‐2 Ag and IgM/IgG using RDTs. All results of antigen and serologic RDTs were considered valid based on a visible control band, although the intensity of the band was weak for some specimens. Clinical samples collected from COVID‐19 negative patients were used to assess the specificities of the RDTs. All control samples tested negative for SARS‐CoV‐2 antigen and antibodies regardless of the assay (specificity = 100.0%).

SARS‐CoV‐2 antigen and serological results according to time since onset of symptom

Among 45 nasopharyngeal samples collected in confirmed COVID‐19 patients, 13 specimens tested positive using the Ag RDT, resulting in a sensitivity (95% confidence interval [CI]) of 29.0% (15.7–42.3) (Table S1A). The sensitivity was 41.0% (20.4–61.6) in samples collected during the first week after the onset of symptoms, 29.0% (5.2–52.8) during the second week, and 0% after 14 days or more (Table S1A,B). Using the SureScreen RDT, 31 samples tested positive for IgM, resulting in a sensitivity (95% CI) of 68.9% (55.4−82.4). The SureScreen IgM RDT has a sensitivity (95% CI) of 64.0% (43.9–84.1) when the estimated time from the onset of symptoms was ≤7 days, reaching 78.0% (50.9–100.0) when ≥14 days (Tables S1A,B). In addition, seventeen samples tested positive for IgM but negative for IgG. The Szybio RDT detected 29 specimens positive for IgM, resulting in a sensitivity of 64.4% (50.5–78.4). The Szybio RDT had a sensitivity of 64.0 (43.9–84.1) when the estimated time from the onset of symptoms ≤7 days, reaching 67.0% (36.3–97.7) when ≥14 days (Tables S1A,B). Seventeen samples were IgM positive but IgG negative, and among these, IgM were also detected by ELISA in 11 samples (Figure S2A). All samples that tested positive for IgG using both the SureScreen and the Szybio RDTs also tested positive for IgM. A good overall agreement between Surescreen and Szybio RDTs was recorded regardless the time since onset of symptom (Table S1B). The presence of anti‐SARS‐CoV‐2 IgM and IgG was also assessed using laboratory assays (SARS‐CoV‐2 IgG Alinity and Theradiag IgM ELISA) on plasma samples collected at admission in the emergency department (Tables S1A,B). A total of 24 out of 45 COVID‐19 confirmed patients tested positive for IgG using the Abbott assay, resulting in a sensitivity (95% CI) of 53.3% (38.8–67.9) (Tables S1A,B). All but one patient tested two weeks after the onset of symptoms tested positive for IgG using the Abbott assay (Figure S3A). IgG signal to cut‐off values were weakly correlated with the amount of time after the onset of symptoms (R 2 = 0.3139, Figure S3A). IgM directed against the S protein were detected in 24 specimens using the Theradiag ELISA, sensitivity (95% CI): 53.3% (38.8–67.9) (Tables S1A,B). Theradiag ELISA IgM ratios were not correlated with the amount of time after the onset of symptoms (R 2 = 0.0413) (data not shown). IgM were detected by ELISA in 11 out of 17 samples tests positive using the rapid tests (Figure S2A).

SARS‐CoV‐2 antigen and serological results according to RT‐PCR C t values

CT values were compared with the amount of time following the onset of symptoms. The two parameters were weakly correlated (R 2 = 0.3151, Figure S3B). The Ag RDT had a sensitivity (95% CI) of 87.0% (70.0–100.0) for C t values ≤25% and 0% for C t values greater than 25 (Table S1A). The median C t value was lower in Ag positive samples compared to negative ones (median [IQR] = 21.4 [18.6–23.8] versus 32.5 [28.2–35.2]; p < .0001; Figure 1).
Figure 1

Coris coronavirus disease 2019 (COVID‐19) Ag Respi‐Strip results according to reverse transcription polymerase chain reaction (RT‐PCR) cyclic threshold (C t) values. C t values recorded by RT‐PCR methods Allple 2019‐nCoV Assay Seegene. The boxes represent interquartile ranges with the horizontal line indicating the median C t value and the whiskers showing minimal and maximal C t values. The p value (two‐tailed) was calculated using the Mann–Whitney U test, and compares the median of C t values in samples with positive antigenic diagnosis tests versus negative results. Patients tested positive for Coris COVID‐19 antigen had lower C t values

Coris coronavirus disease 2019 (COVID‐19) Ag Respi‐Strip results according to reverse transcription polymerase chain reaction (RT‐PCR) cyclic threshold (C t) values. C t values recorded by RT‐PCR methods Allple 2019‐nCoV Assay Seegene. The boxes represent interquartile ranges with the horizontal line indicating the median C t value and the whiskers showing minimal and maximal C t values. The p value (two‐tailed) was calculated using the Mann–Whitney U test, and compares the median of C t values in samples with positive antigenic diagnosis tests versus negative results. Patients tested positive for Coris COVID‐19 antigen had lower C t values RT‐PCR C t values were higher in patients who tested positive using the SureScreen IgM compared to those who tested negative (median [QR]: 31.9 [5.5−35.1] vs. 25.0 [18.8–29.0], p = .0084, Figure 2). Hence, the sensitivity (95% CI) of the SureScreen IgM RDT was 46.7% (21.5–72.0) for C t values ≤25, reaching 86.7% (69.5–100.0) for C t values ≥35 (Tables S1A).
Figure 2

Anti‐SARS‐CoV‐2 immunoglobulin M (IgM) detection using rapid serological diagnosis tests and ELISA according to RT‐PCR C t values. C t values recorded by RT‐PCR methods Allplex 2019‐nCoV Assay Seegene. The boxes represent interquartile ranges with the horizontal line indicating the median C t value and the whiskers showing minimal and maximal C t values. The p value (two‐tailed) was calculated using the Mann–Whitney U test, and compares the median of C t values in samples with positive IgM serological diagnosis tests versus negative results. Patients tested positive for anti‐SARS‐CoV‐2 IgM had higher C t values regardless of the test used. C t, cyclic threshold; ELISA, enzyme‐linked immunosorbent assay; RT‐PCR, reverse transciption polymease chain reaction; SARS‐CoV‐2, severe acute respiratory syndrome coronavirus 2

Anti‐SARS‐CoV‐2 immunoglobulin M (IgM) detection using rapid serological diagnosis tests and ELISA according to RT‐PCR C t values. C t values recorded by RT‐PCR methods Allplex 2019‐nCoV Assay Seegene. The boxes represent interquartile ranges with the horizontal line indicating the median C t value and the whiskers showing minimal and maximal C t values. The p value (two‐tailed) was calculated using the Mann–Whitney U test, and compares the median of C t values in samples with positive IgM serological diagnosis tests versus negative results. Patients tested positive for anti‐SARS‐CoV‐2 IgM had higher C t values regardless of the test used. C t, cyclic threshold; ELISA, enzyme‐linked immunosorbent assay; RT‐PCR, reverse transciption polymease chain reaction; SARS‐CoV‐2, severe acute respiratory syndrome coronavirus 2 The C t value of the RT‐PCR was higher in patients who tested positive for IgM using the Szybio RDT compared those who tested negative (median [IQR]: 31.9 [24.9–35.0] vs. 26.0 [19.6–31.3], p = .0304, Figure 2). The sensitivity of the Szybio IgM RDT was 46.7% (21.5–72.0) for C t values ≤25, and reached 80.0% (59.8–100.0) for C t values ≥35 (Tables S1A). A good overall agreement between Surescreen and Szybio RDTs was recorded regardless the RT‐PCR C t values (Table S1A). The proportion of IgG positive samples rises according to the C t values and the time from the onset of COVID‐19 symptoms (Figure 3 and Table S1A,B).
Figure 3

Anti‐SARS‐CoV‐2 immunoglobulin G (IgG) detection using rapid serological diagnosis tests and chemoluminescence immunoassay according to RT‐PCR C t values. C t values recorded by RT‐PCR methods Allplex 2019‐nCoV Assay Seegene. The boxes represent interquartile ranges with the horizontal line indicating the median C t value and the whiskers showing minimal and maximal C t values. The p value (two‐tailed) was calculated using the Mann–Whitney U test, and compares the median of C t values in samples with positive IgG serological diagnosis tests versus negative results. Patients tested positive for anti‐SARS‐CoV‐2 IgG had higher C t values regardless of the test used. C t, cycle threshold; RT‐PCR, reverse transcription polymerase chain reaction; SARS‐CoV‐2, severe acute respiratory syndrome coronavirus 2

Anti‐SARS‐CoV‐2 immunoglobulin G (IgG) detection using rapid serological diagnosis tests and chemoluminescence immunoassay according to RT‐PCR C t values. C t values recorded by RT‐PCR methods Allplex 2019‐nCoV Assay Seegene. The boxes represent interquartile ranges with the horizontal line indicating the median C t value and the whiskers showing minimal and maximal C t values. The p value (two‐tailed) was calculated using the Mann–Whitney U test, and compares the median of C t values in samples with positive IgG serological diagnosis tests versus negative results. Patients tested positive for anti‐SARS‐CoV‐2 IgG had higher C t values regardless of the test used. C t, cycle threshold; RT‐PCR, reverse transcription polymerase chain reaction; SARS‐CoV‐2, severe acute respiratory syndrome coronavirus 2

COVID‐19 diagnosis using the antigen and IgG/IgM‐based RDTs

The combination of the Coris COVID‐19 Ag and the SureScreen IgM RDTs detected 38 out of 45 specimens, resulting in a sensitivity (95% CI) of 84.0% (73.3–94.7), while the combination of the Coris COVID‐19 Ag and the Szybio IgM RDTs detected 36 specimens, resulting in a sensitivity of 80.0% (68.3 – 91.7) (Figure 4 and Table S4A). The combination of RDTs based on Ag plus IgM detection significantly improved the identification of COVID‐19 cases at hospital admission compared to the Coris Ag RDT alone (p < .0001) or the IgM/IgG RDTs alone (p = .0113 and p = .0142, respectively, Figure 4 and Table S4A).
Figure 4

Performances of diagnostic strategies combining antigen and serological rapid diagnostic tests (RDTs) at hospital admission in patients with COVID‐19 confirmed by RT‐PCR. The diagnostic test results correspond to the proportion of patients with COVID‐19 detected by RDTs. The p value (two‐tailed) was calculated using the Exact binomial's test and compares the performances of a combination of antigen and serological RDTs versus antigen and serological RDTs use alone. COVID‐19, coronavirus disease 2019; RT‐PCR, reverse transcription polymerase chain reaction

Performances of diagnostic strategies combining antigen and serological rapid diagnostic tests (RDTs) at hospital admission in patients with COVID‐19 confirmed by RT‐PCR. The diagnostic test results correspond to the proportion of patients with COVID‐19 detected by RDTs. The p value (two‐tailed) was calculated using the Exact binomial's test and compares the performances of a combination of antigen and serological RDTs versus antigen and serological RDTs use alone. COVID‐19, coronavirus disease 2019; RT‐PCR, reverse transcription polymerase chain reaction

DISCUSSION

In this study, we observed that a majority of nasopharyngeal samples with high concentrations of SARS‐CoV‐2 RNA collected in the early phase of the infection tested positive for COVID‐19 using an antigen RDT, while IgM/IgG serological testing detected patients later in the course of the disease. A combination of an antigen‐based RDT that indicates the presence of the virus, and an IgM‐based RDT that determines whether or not a person has recently been seroconverted against the virus, may be useful in settings where access to fast RT‐PCR methods is limited. Our results using the Ag RDT on samples with high SARS‐CoV‐2 RNA concentrations are in line with previous studies that have reported sensitivities of 74.2%, 85.7%, and 100% for CT values below 25. For specimens which tested positive with CT values over 25, the Ag RDT was not optimal because it was positive in only 12.5% of cases on a nasopharyngeal swab. Furthermore, according to Cochrane Library, the average sensitivity (95% CI) of the point‐of‐care antigen test corresponds to 56.2% (29.5–79.8). A. Scohy et al. have estimated the lower limit of detection of the Coris Ag RDT to be equivalent to 1.8 × 105 copies/mL. The Coris Ag RDT was among the first commercially available Ag RDT in Europe. Others RDT bring to market later showed better performance in SARS‐CoV‐2 antibody tests. Success in SARS‐CoV‐2 isolation in nasopharyngeal specimens suggests that infectivity is low for CT values over 27. , , Data on the kinetics of SARS‐CoV‐2 RNA indicate that the viral load peaks within the first days after the onset of symptoms. Hence, Ag RDTs may be interesting in the early phase of the infection when the viral load is high and the risk of SARS‐CoV‐2 transmission is at its maximum. SARS‐CoV‐2 Ag testing requires nasopharyngeal collection and strict procedures with personal protective equipment to prevent SARS‐CoV‐2 transmission. Despite this drawback, our results show that Ag testing using the Coris RDT can detect the virus before the development of a serological response, and Ag tests might have some advantages when used as a triage test in a pandemic context. First, Ag testing is simple and can be performed in about 15 min after the collection of samples. Second, the Coris Ag RDT that targets the SARS‐CoV and SARS‐CoV‐2 highly conserved nucleoprotein antigen does not cross‐react with seasonal coronaviruses. Hence, the specificity of the assay appears close to 100% in all published studies. , , Thanks to its high specificity and positive predictive value, a positive result using the Coris RDT would make it possible to avoid or delay the RT‐PCR test. The two serological RDTs evaluated in this study also showed a high specificity but a variable sensitivity according to antibody isotype, time from onset of symptoms and RT‐PCR C t values. In contrast of the Coris RDT, the sensitivity of IgM/IgG RDTs improve when days after onset of symptom increase. The performances of the RDTs to detect IgG was lower than that of the Abbott SARS‐CoV‐2 IgG assay. While these RDTs had a lower capacity to detect low IgG concentrations compared to the chemiluminescence immunoassay, both the SureScreen RDT and the Szybio RDT had a good capacity to detect IgM (Figure S5A,B). Results of previous studies suggest that the performances of immunoassays to detect IgM in the early phase of infection varies considerably according to the methods used. The detection of anti‐SARS‐CoV‐2 IgM have been observed several days before the detection of IgG, , but others studies reported IgM seroconversion at the same time or after IgG. , , , , It has been established that during the B cell response, IgM cells are present before IgG class switching. However, during the course of COVID‐19 infection, the peak of IgM may be low and delayed compared to that of IgG. , Data from a recent study comparing COVID‐19 RDTs confirm that the analytical sensitivity for IgM is highly variable depending on the assay whereas the detection of IgG is more homogeneous, hence early IgM detection is strongly dependent on the test used. Beside detection of seroconversion in the early phase of infection, assessment of SARS‐CoV‐2 IgM may be of interest to distinguish between a recent versus a later infection since most COVID‐19 cases become seronegative for IgM within 2 months after symptom onset. The overall efficiency of diagnostic strategies is not only characterized by the intrinsic performances of in vitro assays, which are mainly estimated through sensitivity and specificity, but also by their accessibility, effectiveness, speed of process, and period of time to obtain results. Furthermore, diagnosis can benefit from a testing algorithm based on successive steps of triage, screening, and confirmation. Compared to RT‐PCR assays, tests performed at the point‐of‐care offer interesting benefits, including rapid diagnosis and simplicity of use outside of laboratory facilities. Our results have shown that a combination of antigen and antibodies‐based RDTs is highly specific and detects most carriers of SARS‐CoV‐2 admitted to the hospital at different times over the course of the COVID‐19 infection. RT‐PCR tests remain the most reliable methodology for COVID‐19 testing but RDTs strengthen countries' overall testing capacity. European Commission recommend the use of COVID‐19 antigen rapid tests among symptomatic cases and contacts of confirmed cases. Our results showed that testing SARS‐CoV‐2 antigen plus antibodies using RDTs would improve the rate of COVID‐19 confirmation compared to COVID‐19 testing using antigen RDT alone. The effectiveness of antibody RDTs is obvious when the delay after onset of symptom is over seven days but request a capillary or venous blood collection. Furthermore, the cost of antigen plus antibodies COVID‐19 RDTs is below 10 euros, compare to 25–30 euros for a random access RT‐PCR test in our hospital. Our study has some limitations. We used an antigen rapid test that has lower performances than more recent antigen tests. The study was performed in a laboratory settings whereas rapid tests are especially useful when used as point of care tests. Finally, we did not include pauci‐symptomatic or asymptomatic SARS‐CoV‐2 infections. A synthetic representation of variation over time in biological markers for COVID‐19 diagnosis is proposed in Figure 5.
Figure 5

Variation over time in biological markers for COVID‐19 diagnosis. High viral load (RT‐PCR) C t value less than 25 and antigen detection in nasopharyngeal specimens characterize the first week after the onset of symptoms when the risk of SARS‐CoV‐2 transmission is at its maximum. The second week of COVID‐19 infection is the period when the absence of detectable Ag and IgM/IgG is the most probable. The eclipse phase of antigen/IgM/IgG combined RDTs is most likely observable during this time period. A low level or the absence of SARS‐CoV‐2 RNA alongside IgG and IgM detection is observed two weeks after the onset of symptoms in most patients. COVID‐19, coronavirus disease 2019; C t, cycle threshold; IgG, immunoglobulin G; IgM, immunoglobulin M; RT‐PCR, reverse transcription polymerase chain reaction; SARS‐CoV‐2, severe acute respiratory syndrome coronavirus 2

Variation over time in biological markers for COVID‐19 diagnosis. High viral load (RT‐PCR) C t value less than 25 and antigen detection in nasopharyngeal specimens characterize the first week after the onset of symptoms when the risk of SARS‐CoV‐2 transmission is at its maximum. The second week of COVID‐19 infection is the period when the absence of detectable Ag and IgM/IgG is the most probable. The eclipse phase of antigen/IgM/IgG combined RDTs is most likely observable during this time period. A low level or the absence of SARS‐CoV‐2 RNA alongside IgG and IgM detection is observed two weeks after the onset of symptoms in most patients. COVID‐19, coronavirus disease 2019; C t, cycle threshold; IgG, immunoglobulin G; IgM, immunoglobulin M; RT‐PCR, reverse transcription polymerase chain reaction; SARS‐CoV‐2, severe acute respiratory syndrome coronavirus 2 In conclusion, our results show that the Coris Ag immunochromatographic assay has insufficient sensitivity for the diagnosis of COVID‐19 when used alone, but it could be a valuable tool when used in an integrative diagnostic strategy. Ag and IgM/IgG rapid diagnosis assays are complementary, and when used in combination are able to identify most patients with COVID‐19 admitted in an emergency department. To be an effective alternative to nucleic acid tests and have a significant place in the global response to the COVID‐19 pandemic, RDTs must combine high sensitivity to detect SARS‐CoV‐2 antigens and early and specific detection of IgM.

CONFLICT OF INTERESTS

The authors declare that there are no conflict of interests or personal relationships that could have appeared to influence the work reported in this paper.

AUTHOR CONTRIBUTIONS

Nicolas Veyrenche has performed experiments, statistical analysis, and wrote the manuscript. Karine Bolloré and Amandine Pisoni have performed experiments. Anne‐Sophie Bedin has helped to use GraphPad Prism 8.0. Anne‐Marie Mondain, Jacques Ducos, Michel Segondy, Brigitte Montes, Patrick Pastor, David Morquin, Alain Makinson, Vincent Le Moing, Philippe Van de Perre, and Vincent Foulongne have discussed the results and critically reviewed the manuscript. Edouard Tuaillon has conceived the study, discussed the results and wrote the manuscript. All authors contributed to the article and approved the submitted version.

ETHICS STATEMENT

This study received an institutional ethics committee approval (CPP Ile de France III, n°2020‐A00935−34; ClinicalTrials. gov Identifier: NCT04347850). Supporting information. Click here for additional data file.
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1.  Audio Interview: New Research on Possible Treatments for Covid-19.

Authors:  Eric J Rubin; Lindsey R Baden; Stephen Morrissey
Journal:  N Engl J Med       Date:  2020-03-19       Impact factor: 91.245

2.  Virological assessment of hospitalized patients with COVID-2019.

Authors:  Roman Wölfel; Victor M Corman; Wolfgang Guggemos; Michael Seilmaier; Sabine Zange; Marcel A Müller; Daniela Niemeyer; Terry C Jones; Patrick Vollmar; Camilla Rothe; Michael Hoelscher; Tobias Bleicker; Sebastian Brünink; Julia Schneider; Rosina Ehmann; Katrin Zwirglmaier; Christian Drosten; Clemens Wendtner
Journal:  Nature       Date:  2020-04-01       Impact factor: 49.962

3.  Antibody tests for identification of current and past infection with SARS-CoV-2.

Authors:  Jonathan J Deeks; Jacqueline Dinnes; Yemisi Takwoingi; Clare Davenport; René Spijker; Sian Taylor-Phillips; Ada Adriano; Sophie Beese; Janine Dretzke; Lavinia Ferrante di Ruffano; Isobel M Harris; Malcolm J Price; Sabine Dittrich; Devy Emperador; Lotty Hooft; Mariska Mg Leeflang; Ann Van den Bruel
Journal:  Cochrane Database Syst Rev       Date:  2020-06-25

4.  Four point-of-care lateral flow immunoassays for diagnosis of COVID-19 and for assessing dynamics of antibody responses to SARS-CoV-2.

Authors:  Jhong-Lin Wu; Wen-Pin Tseng; Chien-Hao Lin; Tai-Fen Lee; Ming-Yi Chung; Chien-Hua Huang; Shey-Ying Chen; Po-Ren Hsueh; Shyr-Chyr Chen
Journal:  J Infect       Date:  2020-06-15       Impact factor: 6.072

5.  Assessment of SARS-CoV-2 serological tests for the diagnosis of COVID-19 through the evaluation of three immunoassays: Two automated immunoassays (Euroimmun and Abbott) and one rapid lateral flow immunoassay (NG Biotech).

Authors:  Thomas Nicol; Caroline Lefeuvre; Orianne Serri; Adeline Pivert; Françoise Joubaud; Vincent Dubée; Achille Kouatchet; Alexandra Ducancelle; Françoise Lunel-Fabiani; Hélène Le Guillou-Guillemette
Journal:  J Clin Virol       Date:  2020-06-15       Impact factor: 3.168

6.  SARS-CoV-2 Antibody Responses Do Not Predict COVID-19 Disease Severity.

Authors:  William S Phipps; Jeffrey A SoRelle; Quan-Zhen Li; Lenin Mahimainathan; Ellen Araj; John Markantonis; Chantale Lacelle; Jyoti Balani; Hiren Parikh; E Blair Solow; David R Karp; Ravi Sarode; Alagarraju Muthukumar
Journal:  Am J Clin Pathol       Date:  2020-09-08       Impact factor: 2.493

7.  Detection of SARS-CoV-2 antibodies using commercial assays and seroconversion patterns in hospitalized patients.

Authors:  E Tuaillon; K Bolloré; A Pisoni; S Debiesse; C Renault; S Marie; S Groc; C Niels; N Pansu; A M Dupuy; D Morquin; V Foulongne; A Bourdin; V Le Moing; P Van de Perre
Journal:  J Infect       Date:  2020-06-03       Impact factor: 6.072

8.  Dynamics and significance of the antibody response to SARS-CoV-2 infection.

Authors:  Anita S Iyer; Forrest K Jones; Ariana Nodoushani; Meagan Kelly; Margaret Becker; Damien Slater; Rachel Mills; Erica Teng; Mohammad Kamruzzaman; Wilfredo F Garcia-Beltran; Michael Astudillo; Diane Yang; Tyler E Miller; Elizabeth Oliver; Stephanie Fischinger; Caroline Atyeo; A John Iafrate; Stephen B Calderwood; Stephen A Lauer; Jingyou Yu; Zhenfeng Li; Jared Feldman; Blake M Hauser; Timothy M Caradonna; John A Branda; Sarah E Turbett; Regina C LaRocque; Guillaume Mellon; Dan H Barouch; Aaron G Schmidt; Andrew S Azman; Galit Alter; Edward T Ryan; Jason B Harris; Richelle C Charles
Journal:  medRxiv       Date:  2020-07-20

9.  Profile of specific antibodies to SARS-CoV-2: The first report.

Authors:  Ai Tang Xiao; Chun Gao; Sheng Zhang
Journal:  J Infect       Date:  2020-03-21       Impact factor: 6.072

10.  Antibody Responses to SARS-CoV-2 in Patients With Novel Coronavirus Disease 2019.

Authors:  Juanjuan Zhao; Quan Yuan; Haiyan Wang; Wei Liu; Xuejiao Liao; Yingying Su; Xin Wang; Jing Yuan; Tingdong Li; Jinxiu Li; Shen Qian; Congming Hong; Fuxiang Wang; Yingxia Liu; Zhaoqin Wang; Qing He; Zhiyong Li; Bin He; Tianying Zhang; Yang Fu; Shengxiang Ge; Lei Liu; Jun Zhang; Ningshao Xia; Zheng Zhang
Journal:  Clin Infect Dis       Date:  2020-11-19       Impact factor: 9.079

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  15 in total

1.  Bidirectional genome-wide CRISPR screens reveal host factors regulating SARS-CoV-2, MERS-CoV and seasonal HCoVs.

Authors:  Caroline Goujon; Antoine Rebendenne; Priyanka Roy; Boris Bonaventure; Ana Chaves Valadao; Lowiese Desmarets; Yves Rouillé; Marine Tauziet; Mary Arnaud-Arnould; Donatella Giovannini; Yenarae Lee; Peter DeWeirdt; Mudra Hegde; Francisco Garcia de Gracia; Joe McKellar; Mélanie Wencker; Jean Dubuisson; Sandrine Belouzard; Olivier Moncorgé; John Doench
Journal:  Res Sq       Date:  2021-05-27

Review 2.  Rapid, point-of-care antigen tests for diagnosis of SARS-CoV-2 infection.

Authors:  Jacqueline Dinnes; Pawana Sharma; Sarah Berhane; Susanna S van Wyk; Nicholas Nyaaba; Julie Domen; Melissa Taylor; Jane Cunningham; Clare Davenport; Sabine Dittrich; Devy Emperador; Lotty Hooft; Mariska Mg Leeflang; Matthew Df McInnes; René Spijker; Jan Y Verbakel; Yemisi Takwoingi; Sian Taylor-Phillips; Ann Van den Bruel; Jonathan J Deeks
Journal:  Cochrane Database Syst Rev       Date:  2022-07-22

3.  Bidirectional genome-wide CRISPR screens reveal host factors regulating SARS-CoV-2, MERS-CoV and seasonal HCoVs.

Authors:  Boris Bonaventure; Ana Luiza Chaves Valadão; Antoine Rebendenne; Priyanka Roy; Lowiese Desmarets; Mary Arnaud-Arnould; Yves Rouillé; Marine Tauziet; Donatella Giovannini; Jawida Touhami; Yenarae Lee; Peter DeWeirdt; Mudra Hegde; Serge Urbach; Khadija El Koulali; Francisco Garcia de Gracia; Joe McKellar; Jean Dubuisson; Mélanie Wencker; Sandrine Belouzard; Olivier Moncorgé; John G Doench; Caroline Goujon
Journal:  Nat Genet       Date:  2022-07-25       Impact factor: 41.307

Review 4.  Performance of Antigen Detection Tests for SARS-CoV-2: A Systematic Review and Meta-Analysis.

Authors:  Anastasia Tapari; Georgia G Braliou; Maria Papaefthimiou; Helen Mavriki; Panagiota I Kontou; Georgios K Nikolopoulos; Pantelis G Bagos
Journal:  Diagnostics (Basel)       Date:  2022-06-04

5.  Antigen Detection Tests for SARS-CoV-2: a systematic review and meta-analysis on real world data.

Authors:  Matteo Riccò; Silvia Ranzieri; Simona Peruzzi; Marina Valente; Federico Marchesi; Nicola Luigi Bragazzi; Davide Donelli; Federica Balzarini; Pietro Ferraro; Vincenza Gianfredi; Carlo Signorelli
Journal:  Acta Biomed       Date:  2022-05-11

6.  Rapid, point-of-care antigen and molecular-based tests for diagnosis of SARS-CoV-2 infection.

Authors:  Jacqueline Dinnes; Jonathan J Deeks; Sarah Berhane; Melissa Taylor; Ada Adriano; Clare Davenport; Sabine Dittrich; Devy Emperador; Yemisi Takwoingi; Jane Cunningham; Sophie Beese; Julie Domen; Janine Dretzke; Lavinia Ferrante di Ruffano; Isobel M Harris; Malcolm J Price; Sian Taylor-Phillips; Lotty Hooft; Mariska Mg Leeflang; Matthew Df McInnes; René Spijker; Ann Van den Bruel
Journal:  Cochrane Database Syst Rev       Date:  2021-03-24

7.  Diagnosis value of SARS-CoV-2 antigen/antibody combined testing using rapid diagnostic tests at hospital admission.

Authors:  Nicolas Veyrenche; Karine Bolloré; Amandine Pisoni; Anne-Sophie Bedin; Anne-Marie Mondain; Jacques Ducos; Michel Segondy; Brigitte Montes; Patrick Pastor; David Morquin; Alain Makinson; Vincent Le Moing; Philippe Van de Perre; Vincent Foulongne; Edouard Tuaillon
Journal:  J Med Virol       Date:  2021-02-15       Impact factor: 20.693

8.  Accuracy of novel antigen rapid diagnostics for SARS-CoV-2: A living systematic review and meta-analysis.

Authors:  Lukas E Brümmer; Stephan Katzenschlager; Mary Gaeddert; Christian Erdmann; Stephani Schmitz; Marc Bota; Maurizio Grilli; Jan Larmann; Markus A Weigand; Nira R Pollock; Aurélien Macé; Sergio Carmona; Stefano Ongarello; Jilian A Sacks; Claudia M Denkinger
Journal:  PLoS Med       Date:  2021-08-12       Impact factor: 11.069

9.  COVID-19 Antibody Detecting Rapid Diagnostic Tests Show High Cross-Reactivity When Challenged with Pre-Pandemic Malaria, Schistosomiasis and Dengue Samples.

Authors:  Fien Vanroye; Dorien Van den Bossche; Isabel Brosius; Bieke Tack; Marjan Van Esbroeck; Jan Jacobs
Journal:  Diagnostics (Basel)       Date:  2021-06-25

Review 10.  Point-of-Care Testing-The Key in the Battle against SARS-CoV-2 Pandemic.

Authors:  Florina Silvia Iliescu; Ana Maria Ionescu; Larisa Gogianu; Monica Simion; Violeta Dediu; Mariana Carmen Chifiriuc; Gratiela Gradisteanu Pircalabioru; Ciprian Iliescu
Journal:  Micromachines (Basel)       Date:  2021-11-27       Impact factor: 2.891

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