Literature DB >> 33553629

The complete mitochondrial genome of the Chinese noodlefish Leucosoma chinensis and phylogenetic analysis of Salangidae (Osteichthyes: Osmeriformes).

Fei Xiong1,2, Dongdong Zhai1,2, Jixin Yu1, Yuanyuan Chen1, Ying Wang1, Hongyan Liu1.   

Abstract

In the present study, we obtained the first complete mitochondrial genome sequence of Leucosoma (Salanx) chinensis. It was 16,595 bp in length and consisted of 13 protein-coding genes, 22 transfer RNA genes, 2 ribosomal RNA genes, and a non-coding control region. The nucleotide composition was A (23.1%), T (25.2%), G (20.0%) and C (31.8%), and the A + T content (48.3%) was a little lower than G + C content (51.80%). Phylogenetic analysis of 10 species of Salangidae identified three major clades. These results may facilitate the future genetic research of L. chinensis and Salangidae.
© 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Leucosoma chinensis; Salangidae; Salanx chinensis; mitochondrial genome; phylogenetic tree

Year:  2021        PMID: 33553629      PMCID: PMC7850319          DOI: 10.1080/23802359.2020.1860720

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN: 2380-2359            Impact factor:   0.658


  5 in total

1.  Automatic annotation of organellar genomes with DOGMA.

Authors:  Stacia K Wyman; Robert K Jansen; Jeffrey L Boore
Journal:  Bioinformatics       Date:  2004-06-04       Impact factor: 6.937

2.  ARWEN: a program to detect tRNA genes in metazoan mitochondrial nucleotide sequences.

Authors:  Dean Laslett; Björn Canbäck
Journal:  Bioinformatics       Date:  2007-11-22       Impact factor: 6.937

3.  MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets.

Authors:  Sudhir Kumar; Glen Stecher; Koichiro Tamura
Journal:  Mol Biol Evol       Date:  2016-03-22       Impact factor: 16.240

4.  NOVOPlasty: de novo assembly of organelle genomes from whole genome data.

Authors:  Nicolas Dierckxsens; Patrick Mardulyn; Guillaume Smits
Journal:  Nucleic Acids Res       Date:  2017-02-28       Impact factor: 16.971

5.  The published complete mitochondrial genome of Eptesicus serotinus is a chimera of Vespertilio sinensis and Hypsugo alaschanicus (Mammalia: Chiroptera).

Authors:  George Sangster; Jolanda A Luksenburg
Journal:  Mitochondrial DNA B Resour       Date:  2020-07-06       Impact factor: 0.658

  5 in total
  1 in total

1.  Recombinant Mitochondrial Genomes Reveal Recent Interspecific Hybridization between Invasive Salangid Fishes.

Authors:  Evgeniy S Balakirev
Journal:  Life (Basel)       Date:  2022-04-29
  1 in total

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