Literature DB >> 33551730

Edge-Aware Pyramidal Deformable Network for Unsupervised Registration of Brain MR Images.

Yiqin Cao1, Zhenyu Zhu1, Yi Rao1, Chenchen Qin2, Di Lin3, Qi Dou4, Dong Ni1, Yi Wang1.   

Abstract

Deformable image registration is of essential important for clinical diagnosis, treatment planning, and surgical navigation. However, most existing registration solutions require separate rigid alignment before deformable registration, and may not well handle the large deformation circumstances. We propose a novel edge-aware pyramidal deformable network (referred as EPReg) for unsupervised volumetric registration. Specifically, we propose to fully exploit the useful complementary information from the multi-level feature pyramids to predict multi-scale displacement fields. Such coarse-to-fine estimation facilitates the progressive refinement of the predicted registration field, which enables our network to handle large deformations between volumetric data. In addition, we integrate edge information with the original images as dual-inputs, which enhances the texture structures of image content, to impel the proposed network pay extra attention to the edge-aware information for structure alignment. The efficacy of our EPReg was extensively evaluated on three public brain MRI datasets including Mindboggle101, LPBA40, and IXI30. Experiments demonstrate our EPReg consistently outperformed several cutting-edge methods with respect to the metrics of Dice index (DSC), Hausdorff distance (HD), and average symmetric surface distance (ASSD). The proposed EPReg is a general solution for the problem of deformable volumetric registration.
Copyright © 2021 Cao, Zhu, Rao, Qin, Lin, Dou, Ni and Wang.

Entities:  

Keywords:  3D registration; affine registration; brain MR image; convolutional neural networks; deformable image registration

Year:  2021        PMID: 33551730      PMCID: PMC7859447          DOI: 10.3389/fnins.2020.620235

Source DB:  PubMed          Journal:  Front Neurosci        ISSN: 1662-453X            Impact factor:   4.677


  25 in total

1.  BIRNet: Brain image registration using dual-supervised fully convolutional networks.

Authors:  Jingfan Fan; Xiaohuan Cao; Pew-Thian Yap; Dinggang Shen
Journal:  Med Image Anal       Date:  2019-03-22       Impact factor: 8.545

2.  Deformable Image Registration based on Similarity-Steered CNN Regression.

Authors:  Xiaohuan Cao; Jianhua Yang; Jun Zhang; Dong Nie; Min-Jeong Kim; Qian Wang; Dinggang Shen
Journal:  Med Image Comput Comput Assist Interv       Date:  2017-09-04

3.  Performance of commercially available deformable image registration platforms for contour propagation using patient-based computational phantoms: A multi-institutional study.

Authors:  Gianfranco Loi; Marco Fusella; Eleonora Lanzi; Elisabetta Cagni; Cristina Garibaldi; Giuseppina Iacoviello; Francesco Lucio; Enrico Menghi; Roberto Miceli; Lucia C Orlandini; Antonella Roggio; Federica Rosica; Michele Stasi; Lidia Strigari; Silvia Strolin; Christian Fiandra
Journal:  Med Phys       Date:  2018-01-09       Impact factor: 4.071

Review 4.  Deep Learning in Medical Image Analysis.

Authors:  Dinggang Shen; Guorong Wu; Heung-Il Suk
Journal:  Annu Rev Biomed Eng       Date:  2017-03-09       Impact factor: 9.590

5.  Computed Tomography to Cone Beam Computed Tomography Deformable Image Registration for Contour Propagation Using Head and Neck, Patient-Based Computational Phantoms: A Multicenter Study.

Authors:  Gianfranco Loi; Marco Fusella; Claudio Vecchi; Sebastiano Menna; Federica Rosica; Eva Gino; Nicola Maffei; Enrico Menghi; Alessandro Savini; Antonella Roggio; Lorenzo Radici; Elisabetta Cagni; Francesco Lucio; Lidia Strigari; Silvia Strolin; Cristina Garibaldi; Chiara Romanò; Marina Piovesan; Pierfrancesco Franco; Christian Fiandra
Journal:  Pract Radiat Oncol       Date:  2019-11-28

6.  Deformable Image Registration Using a Cue-Aware Deep Regression Network.

Authors:  Xiaohuan Cao; Jianhua Yang; Jun Zhang; Qian Wang; Pew-Thian Yap; Dinggang Shen
Journal:  IEEE Trans Biomed Eng       Date:  2018-04-04       Impact factor: 4.538

7.  Construction of a consistent high-definition spatio-temporal atlas of the developing brain using adaptive kernel regression.

Authors:  Ahmed Serag; Paul Aljabar; Gareth Ball; Serena J Counsell; James P Boardman; Mary A Rutherford; A David Edwards; Joseph V Hajnal; Daniel Rueckert
Journal:  Neuroimage       Date:  2011-10-01       Impact factor: 6.556

8.  Difficulty-aware hierarchical convolutional neural networks for deformable registration of brain MR images.

Authors:  Yunzhi Huang; Sahar Ahmad; Jingfan Fan; Dinggang Shen; Pew-Thian Yap
Journal:  Med Image Anal       Date:  2020-09-30       Impact factor: 8.545

9.  Metrics for evaluating 3D medical image segmentation: analysis, selection, and tool.

Authors:  Abdel Aziz Taha; Allan Hanbury
Journal:  BMC Med Imaging       Date:  2015-08-12       Impact factor: 1.930

10.  Weakly-supervised convolutional neural networks for multimodal image registration.

Authors:  Yipeng Hu; Marc Modat; Eli Gibson; Wenqi Li; Nooshin Ghavami; Ester Bonmati; Guotai Wang; Steven Bandula; Caroline M Moore; Mark Emberton; Sébastien Ourselin; J Alison Noble; Dean C Barratt; Tom Vercauteren
Journal:  Med Image Anal       Date:  2018-07-04       Impact factor: 8.545

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.