Literature DB >> 33549150

Histone crotonylation-centric gene regulation.

Kun Li1, Ziqiang Wang2,3.   

Abstract

Histone crotonylation is a recently described post-translational modification that occurs at multiple identified histone lysine crotonylation sites. An increasing number of studies have demonstrated that histone crotonylation at DNA regulatory elements plays an important role in the activation of gene transcription. However, among others, we have shown that elevated cellular crotonylation levels result in the inhibition of endocytosis-related gene expression and pro-growth gene expression, implicating the complexity of histone crotonylation in gene regulation. Therefore, it is important to understand how histone crotonylation is regulated and how it, in turn, regulates the expression of its target genes. In this review, we summarize the regulatory factors that control histone crotonylation and discuss the role of different histone crotonylation sites in regulating gene expression, while providing novel insights into the central role of histone crotonylation in gene regulation.

Entities:  

Keywords:  Eraser; Gene regulation; Histone crotonylation; Reader; Writer

Mesh:

Substances:

Year:  2021        PMID: 33549150      PMCID: PMC7868018          DOI: 10.1186/s13072-021-00385-9

Source DB:  PubMed          Journal:  Epigenetics Chromatin        ISSN: 1756-8935            Impact factor:   4.954


  39 in total

1.  RNF8 ubiquitylates histones at DNA double-strand breaks and promotes assembly of repair proteins.

Authors:  Niels Mailand; Simon Bekker-Jensen; Helene Faustrup; Fredrik Melander; Jiri Bartek; Claudia Lukas; Jiri Lukas
Journal:  Cell       Date:  2007-11-20       Impact factor: 41.582

Review 2.  YEATS Domain-A Histone Acylation Reader in Health and Disease.

Authors:  Dan Zhao; Yuanyuan Li; Xiaozhe Xiong; Zhonglei Chen; Haitao Li
Journal:  J Mol Biol       Date:  2017-03-11       Impact factor: 5.469

3.  Intracellular crotonyl-CoA stimulates transcription through p300-catalyzed histone crotonylation.

Authors:  Benjamin R Sabari; Zhanyun Tang; He Huang; Vladimir Yong-Gonzalez; Henrik Molina; Ha Eun Kong; Lunzhi Dai; Miho Shimada; Justin R Cross; Yingming Zhao; Robert G Roeder; C David Allis
Journal:  Mol Cell       Date:  2015-03-26       Impact factor: 17.970

4.  RNF168 ubiquitinates K13-15 on H2A/H2AX to drive DNA damage signaling.

Authors:  Francesca Mattiroli; Joseph H A Vissers; Willem J van Dijk; Pauline Ikpa; Elisabetta Citterio; Wim Vermeulen; Jurgen A Marteijn; Titia K Sixma
Journal:  Cell       Date:  2012-09-14       Impact factor: 41.582

5.  RNF8 regulates active epigenetic modifications and escape gene activation from inactive sex chromosomes in post-meiotic spermatids.

Authors:  Ho-Su Sin; Artem Barski; Fan Zhang; Andrey V Kartashov; Andre Nussenzweig; Junjie Chen; Paul R Andreassen; Satoshi H Namekawa
Journal:  Genes Dev       Date:  2012-12-15       Impact factor: 11.361

6.  Selective recognition of histone crotonylation by double PHD fingers of MOZ and DPF2.

Authors:  Xiaozhe Xiong; Tatyana Panchenko; Shuang Yang; Shuai Zhao; Peiqiang Yan; Wenhao Zhang; Wei Xie; Yuanyuan Li; Yingming Zhao; C David Allis; Haitao Li
Journal:  Nat Chem Biol       Date:  2016-10-24       Impact factor: 15.040

7.  TFG/TAF30/ANC1, a component of the yeast SWI/SNF complex that is similar to the leukemogenic proteins ENL and AF-9.

Authors:  B R Cairns; N L Henry; R D Kornberg
Journal:  Mol Cell Biol       Date:  1996-07       Impact factor: 4.272

8.  Recognition of Histone Crotonylation by Taf14 Links Metabolic State to Gene Expression.

Authors:  Graeme J Gowans; Joseph B Bridgers; Jibo Zhang; Raghuvar Dronamraju; Anthony Burnetti; Devin A King; Aline V Thiengmany; Stephen A Shinsky; Natarajan V Bhanu; Benjamin A Garcia; Nicolas E Buchler; Brian D Strahl; Ashby J Morrison
Journal:  Mol Cell       Date:  2019-10-29       Impact factor: 17.970

9.  MOF as an evolutionarily conserved histone crotonyltransferase and transcriptional activation by histone acetyltransferase-deficient and crotonyltransferase-competent CBP/p300.

Authors:  Xiaoguang Liu; Wei Wei; Yuting Liu; Xueli Yang; Jian Wu; Yang Zhang; Qiao Zhang; Tieliu Shi; James X Du; Yingming Zhao; Ming Lei; Jin-Qiu Zhou; Jiwen Li; Jiemin Wong
Journal:  Cell Discov       Date:  2017-05-23       Impact factor: 10.849

10.  MiR-155-5p modulates HSV-1 replication via the epigenetic regulation of SRSF2 gene expression.

Authors:  Ziqiang Wang; Kun Li; Xiaoxia Wang; Weiren Huang
Journal:  Epigenetics       Date:  2019-04-05       Impact factor: 4.528

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  6 in total

1.  Nuclear Condensation of CDYL Links Histone Crotonylation and Cystogenesis in Autosomal Dominant Polycystic Kidney Disease.

Authors:  Lin Dang; Xinyi Cao; Tianye Zhang; Yongzhan Sun; Shanshan Tian; Tianyu Gong; Hui Xiong; Peipei Cao; Yuhao Li; Shengqiang Yu; Li Yang; Lirong Zhang; Tong Liu; Kai Zhang; Jing Liang; Yupeng Chen
Journal:  J Am Soc Nephrol       Date:  2022-08-02       Impact factor: 14.978

Review 2.  Histone modification in podocyte injury of diabetic nephropathy.

Authors:  Simeng Wang; Xinyu Zhang; Qinglian Wang; Rong Wang
Journal:  J Mol Med (Berl)       Date:  2022-08-30       Impact factor: 5.606

3.  Chemical Biology Approaches to Identify and Profile Interactors of Chromatin Modifications.

Authors:  Garrison A Nickel; Katharine L Diehl
Journal:  ACS Chem Biol       Date:  2022-03-03       Impact factor: 4.634

4.  Speckles and paraspeckles coordinate to regulate HSV-1 genes transcription.

Authors:  Kun Li; Ziqiang Wang
Journal:  Commun Biol       Date:  2021-10-21

5.  Involvement of Histone Lysine Crotonylation in the Regulation of Nerve-Injury-Induced Neuropathic Pain.

Authors:  Yu Zou; Xue-Hui Bai; Ling-Chi Kong; Fei-Fei Xu; Ting-Yu Ding; Peng-Fei Zhang; Fu-Lu Dong; Yue-Juan Ling; Bao-Chun Jiang
Journal:  Front Immunol       Date:  2022-07-14       Impact factor: 8.786

6.  Antileishmanial metallodrugs and the elucidation of new drug targets linked to post-translational modifications machinery: pitfalls and progress.

Authors:  Rubens Lima do Monte Neto; Paulo Otávio Lourenço Moreira; Alessandra Mara de Sousa; Miguel Antonio do Nascimento Garcia; Suellen Rodrigues Maran; Nilmar Silvio Moretti
Journal:  Mem Inst Oswaldo Cruz       Date:  2022-03-23       Impact factor: 2.743

  6 in total

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