Literature DB >> 33547549

Wilson disease tissue classification and characterization using seven artificial intelligence models embedded with 3D optimization paradigm on a weak training brain magnetic resonance imaging datasets: a supercomputer application.

Mohit Agarwal1, Luca Saba2, Suneet K Gupta1, Amer M Johri3, Narendra N Khanna4, Sophie Mavrogeni5, John R Laird6, Gyan Pareek7, Martin Miner8, Petros P Sfikakis9, Athanasios Protogerou10, Aditya M Sharma11, Vijay Viswanathan12, George D Kitas13, Andrew Nicolaides14, Jasjit S Suri15.   

Abstract

Wilson's disease (WD) is caused by copper accumulation in the brain and liver, and if not treated early, can lead to severe disability and death. WD has shown white matter hyperintensity (WMH) in the brain magnetic resonance scans (MRI) scans, but the diagnosis is challenging due to (i) subtle intensity changes and (ii) weak training MRI when using artificial intelligence (AI). Design and validate seven types of high-performing AI-based computer-aided design (CADx) systems consisting of 3D optimized classification, and characterization of WD against controls. We propose a "conventional deep convolution neural network" (cDCNN) and an "improved DCNN" (iDCNN) where rectified linear unit (ReLU) activation function was modified ensuring "differentiable at zero." Three-dimensional optimization was achieved by recording accuracy while changing the CNN layers and augmentation by several folds. WD was characterized using (i) CNN-based feature map strength and (ii) Bispectrum strengths of pixels having higher probabilities of WD. We further computed the (a) area under the curve (AUC), (b) diagnostic odds ratio (DOR), (c) reliability, and (d) stability and (e) benchmarking. Optimal results were achieved using 9 layers of CNN, with 4-fold augmentation. iDCNN yields superior performance compared to cDCNN with accuracy and AUC of 98.28 ± 1.55, 0.99 (p < 0.0001), and 97.19 ± 2.53%, 0.984 (p < 0.0001), respectively. DOR of iDCNN outperformed cDCNN fourfold. iDCNN also outperformed (a) transfer learning-based "Inception V3" paradigm by 11.92% and (b) four types of "conventional machine learning-based systems": k-NN, decision tree, support vector machine, and random forest by 55.13%, 28.36%, 15.35%, and 14.11%, respectively. The AI-based systems can potentially be useful in the early WD diagnosis. Graphical Abstract.

Entities:  

Keywords:  Artificial intelligence; Deep learning; Diagnostic ratio; Machine learning; Performance; Reliability; Stability; Three-dimensional optimization; Transfer learning; Wilson’s disease

Year:  2021        PMID: 33547549     DOI: 10.1007/s11517-021-02322-0

Source DB:  PubMed          Journal:  Med Biol Eng Comput        ISSN: 0140-0118            Impact factor:   2.602


  45 in total

1.  A practice guideline on Wilson disease.

Authors:  Eve A Roberts; Michael L Schilsky
Journal:  Hepatology       Date:  2003-06       Impact factor: 17.425

Review 2.  Wilson disease--a practical approach to diagnosis, treatment and follow-up.

Authors:  V Medici; L Rossaro; G C Sturniolo
Journal:  Dig Liver Dis       Date:  2007-03-26       Impact factor: 4.088

Review 3.  Wilson disease and other neurodegenerations with metal accumulations.

Authors:  Petr Dusek; Tomasz Litwin; Anna Czlonkowska
Journal:  Neurol Clin       Date:  2015-02       Impact factor: 3.806

4.  Brain connectivity and novel network measures for Alzheimer's disease classification.

Authors:  Gautam Prasad; Shantanu H Joshi; Talia M Nir; Arthur W Toga; Paul M Thompson
Journal:  Neurobiol Aging       Date:  2014-08-30       Impact factor: 4.673

5.  Effect of carotid image-based phenotypes on cardiovascular risk calculator: AECRS1.0.

Authors:  Narendra N Khanna; Ankush D Jamthikar; Deep Gupta; Tadashi Araki; Matteo Piga; Luca Saba; Carlo Carcassi; Andrew Nicolaides; John R Laird; Harman S Suri; Ajay Gupta; Sophie Mavrogeni; Athanasios Protogerou; Petros Sfikakis; George D Kitas; Jasjit S Suri
Journal:  Med Biol Eng Comput       Date:  2019-04-15       Impact factor: 2.602

Review 6.  A Review on Carotid Ultrasound Atherosclerotic Tissue Characterization and Stroke Risk Stratification in Machine Learning Framework.

Authors:  Aditya M Sharma; Ajay Gupta; P Krishna Kumar; Jeny Rajan; Luca Saba; Ikeda Nobutaka; John R Laird; Andrew Nicolades; Jasjit S Suri
Journal:  Curr Atheroscler Rep       Date:  2015-09       Impact factor: 5.113

7.  Group-constrained sparse fMRI connectivity modeling for mild cognitive impairment identification.

Authors:  Chong-Yaw Wee; Pew-Thian Yap; Daoqiang Zhang; Lihong Wang; Dinggang Shen
Journal:  Brain Struct Funct       Date:  2013-03-07       Impact factor: 3.270

8.  Wilson's disease: MRI features.

Authors:  Paramdeep Singh; Archana Ahluwalia; Kavita Saggar; Charanpreet Singh Grewal
Journal:  J Pediatr Neurosci       Date:  2011-01

9.  Wilson's disease: 'face of giant panda' and 'trident' signs together.

Authors:  Jigar R Parekh; Preetesh R Agrawal
Journal:  Oxf Med Case Reports       Date:  2014-04-15

10.  Atypical MRI features involving the brain in Wilson's disease.

Authors:  Muhammad Yousaf; Manoj Kumar; Raghu Ramakrishnaiah; Rudy Vanhemert; Edgardo Angtuaco
Journal:  Radiol Case Rep       Date:  2015-12-07
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  11 in total

1.  COVLIAS 2.0-cXAI: Cloud-Based Explainable Deep Learning System for COVID-19 Lesion Localization in Computed Tomography Scans.

Authors:  Jasjit S Suri; Sushant Agarwal; Gian Luca Chabert; Alessandro Carriero; Alessio Paschè; Pietro S C Danna; Luca Saba; Armin Mehmedović; Gavino Faa; Inder M Singh; Monika Turk; Paramjit S Chadha; Amer M Johri; Narendra N Khanna; Sophie Mavrogeni; John R Laird; Gyan Pareek; Martin Miner; David W Sobel; Antonella Balestrieri; Petros P Sfikakis; George Tsoulfas; Athanasios D Protogerou; Durga Prasanna Misra; Vikas Agarwal; George D Kitas; Jagjit S Teji; Mustafa Al-Maini; Surinder K Dhanjil; Andrew Nicolaides; Aditya Sharma; Vijay Rathore; Mostafa Fatemi; Azra Alizad; Pudukode R Krishnan; Ferenc Nagy; Zoltan Ruzsa; Mostafa M Fouda; Subbaram Naidu; Klaudija Viskovic; Mannudeep K Kalra
Journal:  Diagnostics (Basel)       Date:  2022-06-16

Review 2.  Role of Artificial Intelligence in Radiogenomics for Cancers in the Era of Precision Medicine.

Authors:  Sanjay Saxena; Biswajit Jena; Neha Gupta; Suchismita Das; Deepaneeta Sarmah; Pallab Bhattacharya; Tanmay Nath; Sudip Paul; Mostafa M Fouda; Manudeep Kalra; Luca Saba; Gyan Pareek; Jasjit S Suri
Journal:  Cancers (Basel)       Date:  2022-06-09       Impact factor: 6.575

3.  Eight pruning deep learning models for low storage and high-speed COVID-19 computed tomography lung segmentation and heatmap-based lesion localization: A multicenter study using COVLIAS 2.0.

Authors:  Mohit Agarwal; Sushant Agarwal; Luca Saba; Gian Luca Chabert; Suneet Gupta; Alessandro Carriero; Alessio Pasche; Pietro Danna; Armin Mehmedovic; Gavino Faa; Saurabh Shrivastava; Kanishka Jain; Harsh Jain; Tanay Jujaray; Inder M Singh; Monika Turk; Paramjit S Chadha; Amer M Johri; Narendra N Khanna; Sophie Mavrogeni; John R Laird; David W Sobel; Martin Miner; Antonella Balestrieri; Petros P Sfikakis; George Tsoulfas; Durga Prasanna Misra; Vikas Agarwal; George D Kitas; Jagjit S Teji; Mustafa Al-Maini; Surinder K Dhanjil; Andrew Nicolaides; Aditya Sharma; Vijay Rathore; Mostafa Fatemi; Azra Alizad; Pudukode R Krishnan; Rajanikant R Yadav; Frence Nagy; Zsigmond Tamás Kincses; Zoltan Ruzsa; Subbaram Naidu; Klaudija Viskovic; Manudeep K Kalra; Jasjit S Suri
Journal:  Comput Biol Med       Date:  2022-05-21       Impact factor: 6.698

4.  COVLIAS 1.0Lesion vs. MedSeg: An Artificial Intelligence Framework for Automated Lesion Segmentation in COVID-19 Lung Computed Tomography Scans.

Authors:  Jasjit S Suri; Sushant Agarwal; Gian Luca Chabert; Alessandro Carriero; Alessio Paschè; Pietro S C Danna; Luca Saba; Armin Mehmedović; Gavino Faa; Inder M Singh; Monika Turk; Paramjit S Chadha; Amer M Johri; Narendra N Khanna; Sophie Mavrogeni; John R Laird; Gyan Pareek; Martin Miner; David W Sobel; Antonella Balestrieri; Petros P Sfikakis; George Tsoulfas; Athanasios D Protogerou; Durga Prasanna Misra; Vikas Agarwal; George D Kitas; Jagjit S Teji; Mustafa Al-Maini; Surinder K Dhanjil; Andrew Nicolaides; Aditya Sharma; Vijay Rathore; Mostafa Fatemi; Azra Alizad; Pudukode R Krishnan; Ferenc Nagy; Zoltan Ruzsa; Mostafa M Fouda; Subbaram Naidu; Klaudija Viskovic; Manudeep K Kalra
Journal:  Diagnostics (Basel)       Date:  2022-05-21

5.  Systematic Review of Artificial Intelligence in Acute Respiratory Distress Syndrome for COVID-19 Lung Patients: A Biomedical Imaging Perspective.

Authors:  Jasjit S Suri; Sushant Agarwal; Suneet Gupta; Anudeep Puvvula; Klaudija Viskovic; Neha Suri; Azra Alizad; Ayman El-Baz; Luca Saba; Mostafa Fatemi; D Subbaram Naidu
Journal:  IEEE J Biomed Health Inform       Date:  2021-11-05       Impact factor: 5.772

6.  Human activity recognition in artificial intelligence framework: a narrative review.

Authors:  Neha Gupta; Suneet K Gupta; Rajesh K Pathak; Vanita Jain; Parisa Rashidi; Jasjit S Suri
Journal:  Artif Intell Rev       Date:  2022-01-18       Impact factor: 9.588

7.  Unseen Artificial Intelligence-Deep Learning Paradigm for Segmentation of Low Atherosclerotic Plaque in Carotid Ultrasound: A Multicenter Cardiovascular Study.

Authors:  Pankaj K Jain; Neeraj Sharma; Luca Saba; Kosmas I Paraskevas; Mandeep K Kalra; Amer Johri; John R Laird; Andrew N Nicolaides; Jasjit S Suri
Journal:  Diagnostics (Basel)       Date:  2021-12-02

8.  Multimodal Imaging under Artificial Intelligence Algorithm for the Diagnosis of Liver Cancer and Its Relationship with Expressions of EZH2 and p57.

Authors:  Yamin Zhang; Jie Cui; Wei Wan; Jinpeng Liu
Journal:  Comput Intell Neurosci       Date:  2022-03-14

9.  Four Types of Multiclass Frameworks for Pneumonia Classification and Its Validation in X-ray Scans Using Seven Types of Deep Learning Artificial Intelligence Models.

Authors:  Pankaj K Jain; Neeraj Sharma; Mannudeep K Kalra; Klaudija Viskovic; Luca Saba; Jasjit S Suri
Journal:  Diagnostics (Basel)       Date:  2022-03-07

10.  COVLIAS 1.0 vs. MedSeg: Artificial Intelligence-Based Comparative Study for Automated COVID-19 Computed Tomography Lung Segmentation in Italian and Croatian Cohorts.

Authors:  Jasjit S Suri; Sushant Agarwal; Alessandro Carriero; Alessio Paschè; Pietro S C Danna; Marta Columbu; Luca Saba; Klaudija Viskovic; Armin Mehmedović; Samriddhi Agarwal; Lakshya Gupta; Gavino Faa; Inder M Singh; Monika Turk; Paramjit S Chadha; Amer M Johri; Narendra N Khanna; Sophie Mavrogeni; John R Laird; Gyan Pareek; Martin Miner; David W Sobel; Antonella Balestrieri; Petros P Sfikakis; George Tsoulfas; Athanasios Protogerou; Durga Prasanna Misra; Vikas Agarwal; George D Kitas; Jagjit S Teji; Mustafa Al-Maini; Surinder K Dhanjil; Andrew Nicolaides; Aditya Sharma; Vijay Rathore; Mostafa Fatemi; Azra Alizad; Pudukode R Krishnan; Ferenc Nagy; Zoltan Ruzsa; Archna Gupta; Subbaram Naidu; Kosmas I Paraskevas; Mannudeep K Kalra
Journal:  Diagnostics (Basel)       Date:  2021-12-15
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