Literature DB >> 33547322

Nonenzymatic polymerase-like template-directed synthesis of acyclic L-threoninol nucleic acid.

Keiji Murayama1, Hikari Okita2, Takumi Kuriki2, Hiroyuki Asanuma3.   

Abstract

Evolution of xeno nucleic acid (XNA) world essentially requires template-directed synthesis of XNA polymers. In this study, we demonstrate template-directed synthesis of an acyclic XNA, acyclic L-threoninol nucleic acid (L-aTNA), via chemical ligation mediated by N-cyanoimidazole. The ligation of an L-aTNA fragment on an L-aTNA template is significantly faster and occurs in considerably higher yield than DNA ligation. Both L-aTNA ligation on a DNA template and DNA ligation on an L-aTNA template are also observed. High efficiency ligation of trimer L-aTNA fragments to a template-bound primer is achieved. Furthermore, a pseudo primer extension reaction is demonstrated using a pool of random L-aTNA trimers as substrates. To the best of our knowledge, this is the first example of polymerase-like primer extension of XNA with all four nucleobases, generating phosphodiester bonding without any special modification. This technique paves the way for a genetic system of the L-aTNA world.

Entities:  

Year:  2021        PMID: 33547322      PMCID: PMC7864931          DOI: 10.1038/s41467-021-21128-0

Source DB:  PubMed          Journal:  Nat Commun        ISSN: 2041-1723            Impact factor:   14.919


  61 in total

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Review 2.  The origins of the RNA world.

Authors:  Michael P Robertson; Gerald F Joyce
Journal:  Cold Spring Harb Perspect Biol       Date:  2012-05-01       Impact factor: 10.005

3.  Chemical primer extension: efficiently determining single nucleotides in DNA.

Authors:  Patrizia Hagenbuch; Eric Kervio; Annette Hochgesand; Ulrich Plutowski; Clemens Richert
Journal:  Angew Chem Int Ed Engl       Date:  2005-10-14       Impact factor: 15.336

4.  What Is XNA?

Authors:  John C Chaput; Piet Herdewijn
Journal:  Angew Chem Int Ed Engl       Date:  2019-07-19       Impact factor: 15.336

5.  Acyclic L-threoninol nucleic acid (L-aTNA) with suitable structural rigidity cross-pairs with DNA and RNA.

Authors:  Keiji Murayama; Hiromu Kashida; Hiroyuki Asanuma
Journal:  Chem Commun (Camb)       Date:  2015-04-18       Impact factor: 6.222

6.  A nonenzymatic RNA polymerase model.

Authors:  T Inoue; L E Orgel
Journal:  Science       Date:  1983-02-18       Impact factor: 47.728

7.  Chemical reactions within DNA duplexes. Cyanogen bromide as an effective oligodeoxyribonucleotide coupling agent.

Authors:  N I Sokolova; D T Ashirbekova; N G Dolinnaya; Z A Shabarova
Journal:  FEBS Lett       Date:  1988-05-09       Impact factor: 4.124

Review 8.  Exploring the Chemistry of Genetic Information Storage and Propagation through Polymerase Engineering.

Authors:  Gillian Houlihan; Sebastian Arangundy-Franklin; Philipp Holliger
Journal:  Acc Chem Res       Date:  2017-04-06       Impact factor: 22.384

9.  Evolution of sequence-defined highly functionalized nucleic acid polymers.

Authors:  Zhen Chen; Phillip A Lichtor; Adrian P Berliner; Jonathan C Chen; David R Liu
Journal:  Nat Chem       Date:  2018-03-05       Impact factor: 24.427

10.  Common and Potentially Prebiotic Origin for Precursors of Nucleotide Synthesis and Activation.

Authors:  Albert C Fahrenbach; Constantin Giurgiu; Chun Pong Tam; Li Li; Yayoi Hongo; Masashi Aono; Jack W Szostak
Journal:  J Am Chem Soc       Date:  2017-06-22       Impact factor: 15.419

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