Literature DB >> 33539342

Reproduction of patterns in melanocytic proliferations by agent-based simulation and geometric modeling.

Günter Schneckenreither1,2,3, Philipp Tschandl4, Claire Rippinger3, Christoph Sinz4, Dominik Brunmeir3, Nikolas Popper1,3, Harald Kittler4.   

Abstract

Spatio-temporal patterns of melanocytic proliferations observed in vivo are important for diagnosis but the mechanisms that produce them are poorly understood. Here we present an agent-based model for simulating the emergence of the main biologic patterns found in melanocytic proliferations. Our model portrays the extracellular matrix of the dermo-epidermal junction as a two-dimensional manifold and we simulate cellular migration in terms of geometric translations driven by adhesive, repulsive and random forces. Abstracted cellular functions and melanocyte-matrix interactions are modeled as stochastic events. For identification and validation we use visual renderings of simulated cell populations in a horizontal perspective that reproduce growth patterns observed in vivo by sequential dermatoscopy and corresponding vertical views that reproduce the arrangement of melanocytes observed in histopathologic sections. Our results show that a balanced interplay of proliferation and migration produces the typical reticular pattern of nevi, whereas the globular pattern involves additional cellular mechanisms. We further demonstrate that slight variations in the three basic cellular properties proliferation, migration, and adhesion are sufficient to produce a large variety of morphological appearances of nevi. We anticipate our model to be a starting point for the reproduction of more complex scenarios that will help to establish functional connections between abstracted microscopic behavior and macroscopic patterns in all types of melanocytic proliferations including melanoma.

Entities:  

Mesh:

Year:  2021        PMID: 33539342      PMCID: PMC7888658          DOI: 10.1371/journal.pcbi.1008660

Source DB:  PubMed          Journal:  PLoS Comput Biol        ISSN: 1553-734X            Impact factor:   4.475


  63 in total

1.  Topographic variations in normal skin, as viewed by in vivo reflectance confocal microscopy.

Authors:  M Huzaira; F Rius; M Rajadhyaksha; R R Anderson; S González
Journal:  J Invest Dermatol       Date:  2001-06       Impact factor: 8.551

2.  Histological features used in the diagnosis of melanoma are frequently found in benign melanocytic naevi.

Authors:  C Urso; F Rongioletti; D Innocenzi; D Batolo; S Chimenti; P L Fanti; R Filotico; R Gianotti; M Lentini; C Tomasini; M Pippione
Journal:  J Clin Pathol       Date:  2005-04       Impact factor: 3.411

3.  A living mesoscopic cellular automaton made of skin scales.

Authors:  Liana Manukyan; Sophie A Montandon; Anamarija Fofonjka; Stanislav Smirnov; Michel C Milinkovitch
Journal:  Nature       Date:  2017-04-12       Impact factor: 49.962

4.  Follow-up of melanocytic skin lesions with digital epiluminescence microscopy: patterns of modifications observed in early melanoma, atypical nevi, and common nevi.

Authors:  H Kittler; H Pehamberger; K Wolff; M Binder
Journal:  J Am Acad Dermatol       Date:  2000-09       Impact factor: 11.527

5.  The three-dimensional human skin reconstruct model: a tool to study normal skin and melanoma progression.

Authors:  Ling Li; Mizuho Fukunaga-Kalabis; Meenhard Herlyn
Journal:  J Vis Exp       Date:  2011-08-03       Impact factor: 1.355

6.  Learning reflectance confocal microscopy of melanocytic skin lesions through histopathologic transversal sections.

Authors:  Juliana Casagrande Tavoloni Braga; Mariana Petaccia Macedo; Clovis Pinto; João Duprat; Maria Dirlei Begnami; Giovanni Pellacani; Gisele Gargantini Rezze
Journal:  PLoS One       Date:  2013-12-05       Impact factor: 3.240

7.  Potential based, spatial simulation of dynamically nested particles.

Authors:  Till Köster; Philipp Henning; Adelinde M Uhrmacher
Journal:  BMC Bioinformatics       Date:  2019-11-27       Impact factor: 3.169

8.  Development of a three dimensional multiscale computational model of the human epidermis.

Authors:  Salem Adra; Tao Sun; Sheila MacNeil; Mike Holcombe; Rod Smallwood
Journal:  PLoS One       Date:  2010-01-14       Impact factor: 3.240

Review 9.  Modeling Melanoma In Vitro and In Vivo.

Authors:  Kimberley A Beaumont; Nethia Mohana-Kumaran; Nikolas K Haass
Journal:  Healthcare (Basel)       Date:  2013-12-23

10.  Three-dimensional experiments and individual based simulations show that cell proliferation drives melanoma nest formation in human skin tissue.

Authors:  Parvathi Haridas; Alexander P Browning; Jacqui A McGovern; D L Sean McElwain; Matthew J Simpson
Journal:  BMC Syst Biol       Date:  2018-03-27
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.