Literature DB >> 33536496

Organization and phylogenetic relationships of the mitochondrial genomes of Speiredonia retorta and other lepidopteran insects.

Yu Sun1,2, Hua Huang1,2, Yudong Liu1, Shanshan Liu3, Jun Xia1,2, Kai Zhang3, Jian Geng4.   

Abstract

In this study, we analyzed the complete mitochondrial genome (mitogenome) of Speiredonia retorta, which is a pest and a member of the Lepidoptera order. In total, the S. retorta mitogenome was found to contain 15,652 base pairs encoding 13 protein-coding genes (PCGs), 22 tRNAs, 2 rRNAs, as well as an adenine (A) + thymine (T)-rich region. These findings were consistent with the mitogenome composition of other lepidopterans, as we identified all 13 PCGs beginning at ATN codons. We also found that 11 PCGs terminated with canonical stop codons, whereas cox2 and nad4 exhibited incomplete termination codons. By analyzing the mitogenome of S. retorta using Bayesian inference (BI) and maximum likelihood (ML) models, we were able to further confirm that this species is a member of the Erebidae family.

Entities:  

Year:  2021        PMID: 33536496     DOI: 10.1038/s41598-021-82561-1

Source DB:  PubMed          Journal:  Sci Rep        ISSN: 2045-2322            Impact factor:   4.379


  26 in total

1.  Different methods to determine length heteroplasmy within the mitochondrial control region.

Authors:  Sabine Lutz-Bonengel; Timo Sänger; Stefan Pollak; Reinhard Szibor
Journal:  Int J Legal Med       Date:  2004-10       Impact factor: 2.686

2.  How do insect nuclear and mitochondrial gene substitution patterns differ? Insights from Bayesian analyses of combined datasets.

Authors:  Chung-Ping Lin; Bryan N Danforth
Journal:  Mol Phylogenet Evol       Date:  2004-03       Impact factor: 4.286

Review 3.  Insect mitochondrial genomics: implications for evolution and phylogeny.

Authors:  Stephen L Cameron
Journal:  Annu Rev Entomol       Date:  2013-10-16       Impact factor: 19.686

4.  Complete sequence and characterization of the Ectropis oblique mitochondrial genome and its phylogenetic implications.

Authors:  Li-Shang Dai; Saima Kausar; Muhammad Nadeem Abbas; Tian-Tian Wang
Journal:  Int J Biol Macromol       Date:  2017-09-28       Impact factor: 6.953

5.  Mitochondrial genome of Argopecten irradians reveals higher-level phylogenetic relationships in Anisomyaria.

Authors:  Zhao-Zhe Xin; Yu Liu; Chao-Feng Li; Dai-Zhen Zhang; Sen-Hao Jiang; Hua-Bin Zhang; Chun-Lin Zhou; Bo-Ping Tang; Qiu-Ning Liu; Li-Shang Dai
Journal:  Int J Biol Macromol       Date:  2018-06-03       Impact factor: 6.953

6.  The mitochondrial genome of the smaller tea tortrix Adoxophyes honmai (Lepidoptera: Tortricidae).

Authors:  Eun-Seung Lee; Kwang Sik Shin; Moo-Sang Kim; Hyungjin Park; Soowon Cho; Chang-Bae Kim
Journal:  Gene       Date:  2006-02-20       Impact factor: 3.688

7.  Complete mitochondrial DNA sequence of the sea-firefly, Vargula hilgendorfii (Crustacea, Ostracoda) with duplicate control regions.

Authors:  Katsunori Ogoh; Yoshihiro Ohmiya
Journal:  Gene       Date:  2004-02-18       Impact factor: 3.688

8.  The complete mitochondrial genome of Plodia interpunctella (Lepidoptera: Pyralidae) and comparison with other Pyraloidea insects.

Authors:  Qiu-Ning Liu; Xin-Yue Chai; Dan-Dan Bian; Chun-Lin Zhou; Bo-Ping Tang
Journal:  Genome       Date:  2015-11-16       Impact factor: 2.166

9.  Comparative mitochondrial genome analysis of Grammodes geometrica and other noctuid insects reveals conserved mitochondrial genome organization and phylogeny.

Authors:  Yan Huang; Yu Liu; Xiao-Yu Zhu; Zhao-Zhe Xin; Hua-Bin Zhang; Dai-Zhen Zhang; Jia-Lian Wang; Bo-Ping Tang; Chun-Lin Zhou; Qiu-Ning Liu; Li-Shang Dai
Journal:  Int J Biol Macromol       Date:  2018-09-19       Impact factor: 6.953

10.  Comparative mitochondrial genome analysis of Daphnis nerii and other lepidopteran insects reveals conserved mitochondrial genome organization and phylogenetic relationships.

Authors:  Yu Sun; Chen Chen; Jin Gao; Muhammad Nadeem Abbas; Saima Kausar; Cen Qian; Lei Wang; Guoqing Wei; Bao-Jian Zhu; Chao-Liang Liu
Journal:  PLoS One       Date:  2017-06-09       Impact factor: 3.240

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  3 in total

1.  Complete Nucleotide Sequence of the Mitogenome of Tapinoma ibericum (Hymenoptera: Formicidae: Dolichoderinae), Gene Organization and Phylogenetics Implications for the Dolichoderinae Subfamily.

Authors:  Areli Ruiz-Mena; Pablo Mora; Eugenia E Montiel; Teresa Palomeque; Pedro Lorite
Journal:  Genes (Basel)       Date:  2022-07-25       Impact factor: 4.141

2.  Adaptability and Evolution of Gobiidae: A Genetic Exploration.

Authors:  Yongquan Shang; Xibao Wang; Gang Liu; Xiaoyang Wu; Qinguo Wei; Guolei Sun; Xuesong Mei; Yuehuan Dong; Weilai Sha; Honghai Zhang
Journal:  Animals (Basel)       Date:  2022-07-06       Impact factor: 3.231

3.  Enhanced Resolution of Evolution and Phylogeny of the Moths Inferred from Nineteen Mitochondrial Genomes.

Authors:  Xiaofeng Zheng; Rusong Zhang; Bisong Yue; Yongjie Wu; Nan Yang; Chuang Zhou
Journal:  Genes (Basel)       Date:  2022-09-12       Impact factor: 4.141

  3 in total

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