Literature DB >> 30240711

Comparative mitochondrial genome analysis of Grammodes geometrica and other noctuid insects reveals conserved mitochondrial genome organization and phylogeny.

Yan Huang1, Yu Liu2, Xiao-Yu Zhu3, Zhao-Zhe Xin2, Hua-Bin Zhang4, Dai-Zhen Zhang3, Jia-Lian Wang3, Bo-Ping Tang3, Chun-Lin Zhou3, Qiu-Ning Liu5, Li-Shang Dai6.   

Abstract

The mitochondrial genome (mitogenome) plays an important role in revealing molecular evolution. In this study, the complete mitogenome of Grammodes geometrica (G. geometrica) (Lepidoptera: Erebidae) was sequenced and characterized. The nucleotide composition of the genome is highly A + T biased, accounting for 80.49%. Most protein-coding genes (PCGs) are initiated by ATN codons except for the cytochrome oxidase subunit 1 (cox1) gene, which was initiated by CGA. The order and orientation of genes with the order trnM-trnI-trnQ-nad2 is a typical rearrangement compared with those ancestral insects in which trnM is located between trnQ and nad2. Most tRNA genes were folded into the typical cloverleaf structure except for trnS1 (AGN). The A + T-rich region contains the conserved motif "ATAGA" followed by a 19 bp poly-T stretch, which was also observed in other Noctuoidea species. In addition, we reconstructed phylogenetic trees among the nucleotide alignments of five families of Noctuoidea species except the Oenosandridae. Finally, we achieved a well-supported tree, which showed that G. geometrica belongs to the Erebidae family. Moreover, the relationships at the family-level can be displayed as follows: (Notodontidae + (Erebidae + (Nolidae + (Euteliidae + Noctuidae)))).
Copyright © 2018 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Grammodes geometrica; Mitochondrial genome; Phylogeny

Mesh:

Year:  2018        PMID: 30240711     DOI: 10.1016/j.ijbiomac.2018.09.104

Source DB:  PubMed          Journal:  Int J Biol Macromol        ISSN: 0141-8130            Impact factor:   6.953


  8 in total

1.  Organization and phylogenetic relationships of the mitochondrial genomes of Speiredonia retorta and other lepidopteran insects.

Authors:  Yu Sun; Hua Huang; Yudong Liu; Shanshan Liu; Jun Xia; Kai Zhang; Jian Geng
Journal:  Sci Rep       Date:  2021-02-03       Impact factor: 4.379

2.  Characterisation and phylogenetic analysis of the complete mitochondrial genome of Ctenoplusia albostriata (Lepidoptera: Noctuidae: Plusiinae).

Authors:  Shuang Xue; Yuanchen Zhang; Shanshan Gao; Meiling Zhang
Journal:  Mitochondrial DNA B Resour       Date:  2019-10-11       Impact factor: 0.658

3.  Novel gene rearrangement in the mitochondrial genome of Anastatus fulloi (Hymenoptera Chalcidoidea) and phylogenetic implications for Chalcidoidea.

Authors:  Jiequn Yi; Han Wu; Jianbai Liu; Jihu Li; Yinglin Lu; Yifei Zhang; Yinjie Cheng; Yi Guo; Dunsong Li; Yuxing An
Journal:  Sci Rep       Date:  2022-01-25       Impact factor: 4.996

4.  Complete mitochondrial genome sequencing of Oxycarenus laetus (Hemiptera: Lygaeidae) from two geographically distinct regions of India.

Authors:  Shruthi Chalil Sureshan; Ruchi Vivekanand Tanavade; Sewali Ghosh; Saswati Ghosh; Raja Natesan Sella; Habeeb Shaik Mohideen
Journal:  Sci Rep       Date:  2021-12-09       Impact factor: 4.379

5.  A supertree of Northern European macromoths.

Authors:  Robert B Davis; Erki Õunap; Toomas Tammaru
Journal:  PLoS One       Date:  2022-02-18       Impact factor: 3.240

6.  Enhanced Resolution of Evolution and Phylogeny of the Moths Inferred from Nineteen Mitochondrial Genomes.

Authors:  Xiaofeng Zheng; Rusong Zhang; Bisong Yue; Yongjie Wu; Nan Yang; Chuang Zhou
Journal:  Genes (Basel)       Date:  2022-09-12       Impact factor: 4.141

7.  Comparative mitochondrial genome analysis of Eudocima salaminia (Cramer, 1777) (Lepidoptera: Noctuoidea), novel gene rearrangement and phylogenetic relationship within the superfamily Noctuoidea.

Authors:  Muzafar Riyaz; Rauf Ahmad Shah; Ignacimuthu Savarimuthu; Sivasankaran Kuppusamy
Journal:  Mol Biol Rep       Date:  2021-06-09       Impact factor: 2.316

8.  The complete mitochondrial genome of medicinal fungus Taiwanofungus camphoratus reveals gene rearrangements and intron dynamics of Polyporales.

Authors:  Xu Wang; Lihua Jia; Mingdao Wang; Hao Yang; Mingyue Chen; Xiao Li; Hanyu Liu; Qiang Li; Na Liu
Journal:  Sci Rep       Date:  2020-10-05       Impact factor: 4.379

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.