Literature DB >> 33535503

The Chloroplast Trans-Splicing RNA-Protein Supercomplex from the Green Alga Chlamydomonas reinhardtii.

Ulrich Kück1, Olga Schmitt1.   

Abstract

In eukaryotes, RNA trans-splicing is a significant RNA modification process for the end-to-end ligation of exons from separately transcribed primary transcripts to generate mature mRNA. So far, three different categories of RNA trans-splicing have been found in organisms within a diverse range. Here, we review trans-splicing of discontinuous group II introns, which occurs in chloroplasts and mitochondria of lower eukaryotes and plants. We discuss the origin of intronic sequences and the evolutionary relationship between chloroplast ribonucleoprotein complexes and the nuclear spliceosome. Finally, we focus on the ribonucleoprotein supercomplex involved in trans-splicing of chloroplast group II introns from the green alga Chlamydomonas reinhardtii. This complex has been well characterized genetically and biochemically, resulting in a detailed picture of the chloroplast ribonucleoprotein supercomplex. This information contributes substantially to our understanding of the function of RNA-processing machineries and might provide a blueprint for other splicing complexes involved in trans- as well as cis-splicing of organellar intron RNAs.

Entities:  

Keywords:  Chlamydomonas reinhardtii; chloroplast; group II intron; ribonucleoprotein complex; trans-splicing

Year:  2021        PMID: 33535503      PMCID: PMC7912774          DOI: 10.3390/cells10020290

Source DB:  PubMed          Journal:  Cells        ISSN: 2073-4409            Impact factor:   6.600


  171 in total

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2.  Domain structure and three-dimensional model of a group II intron-encoded reverse transcriptase.

Authors:  Forrest J H Blocker; Georg Mohr; Lori H Conlan; Li Qi; Marlene Belfort; Alan M Lambowitz
Journal:  RNA       Date:  2004-12-01       Impact factor: 4.942

3.  The small-subunit processome is a ribosome assembly intermediate.

Authors:  Kara A Bernstein; Jennifer E G Gallagher; Brianna M Mitchell; Sander Granneman; Susan J Baserga
Journal:  Eukaryot Cell       Date:  2004-12

4.  Protein-free spliceosomal snRNAs catalyze a reaction that resembles the first step of splicing.

Authors:  Saba Valadkhan; Afshin Mohammadi; Chaim Wachtel; James L Manley
Journal:  RNA       Date:  2007-10-16       Impact factor: 4.942

5.  Introns and the origin of nucleus-cytosol compartmentalization.

Authors:  William Martin; Eugene V Koonin
Journal:  Nature       Date:  2006-03-02       Impact factor: 49.962

Review 6.  Trans-splicing of organelle introns--a detour to continuous RNAs.

Authors:  Stephanie Glanz; Ulrich Kück
Journal:  Bioessays       Date:  2009-09       Impact factor: 4.345

7.  Testing the exon theory of genes: the evidence from protein structure.

Authors:  A Stoltzfus; D F Spencer; M Zuker; J M Logsdon; W F Doolittle
Journal:  Science       Date:  1994-07-08       Impact factor: 47.728

Review 8.  DEAH-Box RNA Helicases in Pre-mRNA Splicing.

Authors:  Francesca De Bortoli; Sara Espinosa; Rui Zhao
Journal:  Trends Biochem Sci       Date:  2020-11-30       Impact factor: 13.807

Review 9.  Structural studies of the spliceosome: blind men and an elephant.

Authors:  Andrew J Newman; Kiyoshi Nagai
Journal:  Curr Opin Struct Biol       Date:  2010-01-19       Impact factor: 6.809

10.  Tab2 is a novel conserved RNA binding protein required for translation of the chloroplast psaB mRNA.

Authors:  David Dauvillée; Otello Stampacchia; Jacqueline Girard-Bascou; Jean-David Rochaix
Journal:  EMBO J       Date:  2003-12-01       Impact factor: 11.598

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  2 in total

Review 1.  Harnessing the Algal Chloroplast for Heterologous Protein Production.

Authors:  Edoardo Andrea Cutolo; Giulia Mandalà; Luca Dall'Osto; Roberto Bassi
Journal:  Microorganisms       Date:  2022-03-30

2.  The complete mitochondrial genome of Isochrysis galbana harbors a unique repeat structure and a specific trans-spliced cox1 gene.

Authors:  Jingping Fang; Xiuming Xu; Qinchang Chen; Aiting Lin; Shaoqing Lin; Wen Lei; Cairong Zhong; Yongji Huang; Yongjin He
Journal:  Front Microbiol       Date:  2022-09-27       Impact factor: 6.064

  2 in total

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