Literature DB >> 33533273

Survival prediction in glioblastoma on post-contrast magnetic resonance imaging using filtration based first-order texture analysis: Comparison of multiple machine learning models.

Sarv Priya1, Amit Agarwal2, Caitlin Ward3, Thomas Locke1, Varun Monga4, Girish Bathla1.   

Abstract

OBJECTIVE: Magnetic resonance texture analysis (MRTA) is a relatively new technique that can be a valuable addition to clinical and imaging parameters in predicting prognosis. In the present study, we investigated the efficacy of MRTA for glioblastoma survival using T1 contrast-enhanced (CE) images for texture analysis.
METHODS: We evaluated the diagnostic performance of multiple machine learning models based on first-order histogram statistical parameters derived from T1-weighted CE images in the survival stratification of glioblastoma multiforme (GBM). Retrospective evaluation of 85 patients with GBM was performed. Thirty-six first-order texture parameters at six spatial scale filters (SSF) were extracted on the T1 CE axial images for the whole tumor using commercially available research software. Several machine learning classification models (in four broad categories: linear, penalized linear, non-linear, and ensemble classifiers) were evaluated to assess the survival prediction performance using optimal features. Principal component analysis was used prior to fitting the linear classifiers in order to reduce the dimensionality of the feature inputs. Fivefold cross-validation was used to partition the data iteratively into training and testing sets. The area under the receiver operating characteristic curve (AUC) was used to assess the diagnostic performance.
RESULTS: The neural network model was the highest performing model with the highest observed AUC (0.811) and cross-validated AUC (0.71). The most important variable was the age at diagnosis, with mean and mean of positive pixels (MPP) for SSF = 0 being the second and third most important, followed by skewness for SSF = 0 and SSF = 4.
CONCLUSIONS: First-order texture features, when combined with age at presentation, show good accuracy in predicting GBM survival.

Entities:  

Keywords:  Magnetic resonance texture analysis; first-order texture; glioblastoma survival; glioblastomas; histogram; radiomics

Mesh:

Year:  2021        PMID: 33533273      PMCID: PMC8447822          DOI: 10.1177/1971400921990766

Source DB:  PubMed          Journal:  Neuroradiol J        ISSN: 1971-4009


  41 in total

1.  Filtration-histogram based magnetic resonance texture analysis (MRTA) for glioma IDH and 1p19q genotyping.

Authors:  Martin A Lewis; Balaji Ganeshan; Anna Barnes; Sotirios Bisdas; Zane Jaunmuktane; Sebastian Brandner; Raymond Endozo; Ashley Groves; Stefanie C Thust
Journal:  Eur J Radiol       Date:  2019-02-13       Impact factor: 3.528

2.  Radiomic Analysis Reveals Prognostic Information in T1-Weighted Baseline Magnetic Resonance Imaging in Patients With Glioblastoma.

Authors:  Michael Ingrisch; Moritz Jörg Schneider; Dominik Nörenberg; Giovanna Negrao de Figueiredo; Klaus Maier-Hein; Bogdana Suchorska; Ulrich Schüller; Nathalie Albert; Hartmut Brückmann; Maximilian Reiser; Jörg-Christian Tonn; Birgit Ertl-Wagner
Journal:  Invest Radiol       Date:  2017-06       Impact factor: 6.016

Review 3.  Deep Learning: A Primer for Radiologists.

Authors:  Gabriel Chartrand; Phillip M Cheng; Eugene Vorontsov; Michal Drozdzal; Simon Turcotte; Christopher J Pal; Samuel Kadoury; An Tang
Journal:  Radiographics       Date:  2017 Nov-Dec       Impact factor: 5.333

4.  Analysis of heterogeneity of peritumoral T2 hyperintensity in patients with pretreatment glioblastoma: Prognostic value of MRI-based radiomics.

Authors:  Jingjing Shi; Shaowei Yang; Jian Wang; Sui Huang; Yihao Yao; Shun Zhang; Wenzhen Zhu; Jianbo Shao
Journal:  Eur J Radiol       Date:  2019-09-14       Impact factor: 3.528

5.  Addition of MR imaging features and genetic biomarkers strengthens glioblastoma survival prediction in TCGA patients.

Authors:  Manal Nicolasjilwan; Ying Hu; Chunhua Yan; Daoud Meerzaman; Chad A Holder; David Gutman; Rajan Jain; Rivka Colen; Daniel L Rubin; Pascal O Zinn; Scott N Hwang; Prashant Raghavan; Dima A Hammoud; Lisa M Scarpace; Tom Mikkelsen; James Chen; Olivier Gevaert; Kenneth Buetow; John Freymann; Justin Kirby; Adam E Flanders; Max Wintermark
Journal:  J Neuroradiol       Date:  2014-07-02       Impact factor: 3.447

6.  Radiogenomics to characterize regional genetic heterogeneity in glioblastoma.

Authors:  Leland S Hu; Shuluo Ning; Jennifer M Eschbacher; Leslie C Baxter; Nathan Gaw; Sara Ranjbar; Jonathan Plasencia; Amylou C Dueck; Sen Peng; Kris A Smith; Peter Nakaji; John P Karis; C Chad Quarles; Teresa Wu; Joseph C Loftus; Robert B Jenkins; Hugues Sicotte; Thomas M Kollmeyer; Brian P O'Neill; William Elmquist; Joseph M Hoxworth; David Frakes; Jann Sarkaria; Kristin R Swanson; Nhan L Tran; Jing Li; J Ross Mitchell
Journal:  Neuro Oncol       Date:  2016-08-08       Impact factor: 12.300

7.  Radiomic Machine-Learning Classifiers for Prognostic Biomarkers of Head and Neck Cancer.

Authors:  Chintan Parmar; Patrick Grossmann; Derek Rietveld; Michelle M Rietbergen; Philippe Lambin; Hugo J W L Aerts
Journal:  Front Oncol       Date:  2015-12-03       Impact factor: 6.244

8.  Radiogenomic analysis of hypoxia pathway is predictive of overall survival in Glioblastoma.

Authors:  Niha Beig; Jay Patel; Prateek Prasanna; Virginia Hill; Amit Gupta; Ramon Correa; Kaustav Bera; Salendra Singh; Sasan Partovi; Vinay Varadan; Manmeet Ahluwalia; Anant Madabhushi; Pallavi Tiwari
Journal:  Sci Rep       Date:  2018-01-08       Impact factor: 4.379

9.  A Multi-parametric MRI-Based Radiomics Signature and a Practical ML Model for Stratifying Glioblastoma Patients Based on Survival Toward Precision Oncology.

Authors:  Alexander F I Osman
Journal:  Front Comput Neurosci       Date:  2019-08-27       Impact factor: 2.380

10.  Prognostic factors of patients with Gliomas - an analysis on 335 patients with Glioblastoma and other forms of Gliomas.

Authors:  Jianfeng Liang; Xiaomin Lv; Changyu Lu; Xun Ye; Xiaolin Chen; Jia Fu; Chenghua Luo; Yuanli Zhao
Journal:  BMC Cancer       Date:  2020-01-15       Impact factor: 4.430

View more
  5 in total

Review 1.  More than Meets the Eye: Using Textural Analysis and Artificial Intelligence as Decision Support Tools in Prostate Cancer Diagnosis-A Systematic Review.

Authors:  Teodora Telecan; Iulia Andras; Nicolae Crisan; Lorin Giurgiu; Emanuel Darius Căta; Cosmin Caraiani; Andrei Lebovici; Bianca Boca; Zoltan Balint; Laura Diosan; Monica Lupsor-Platon
Journal:  J Pers Med       Date:  2022-06-16

2.  Radiomics Detection of Pulmonary Hypertension via Texture-Based Assessments of Cardiac MRI: A Machine-Learning Model Comparison-Cardiac MRI Radiomics in Pulmonary Hypertension.

Authors:  Sarv Priya; Tanya Aggarwal; Caitlin Ward; Girish Bathla; Mathews Jacob; Alicia Gerke; Eric A Hoffman; Prashant Nagpal
Journal:  J Clin Med       Date:  2021-04-28       Impact factor: 4.964

3.  Predicting the Initial Treatment Response to Transarterial Chemoembolization in Intermediate-Stage Hepatocellular Carcinoma by the Integration of Radiomics and Deep Learning.

Authors:  Jie Peng; Jinhua Huang; Guijia Huang; Jing Zhang
Journal:  Front Oncol       Date:  2021-10-21       Impact factor: 6.244

4.  Radiomics side experiments and DAFIT approach in identifying pulmonary hypertension using Cardiac MRI derived radiomics based machine learning models.

Authors:  Sarv Priya; Tanya Aggarwal; Caitlin Ward; Girish Bathla; Mathews Jacob; Alicia Gerke; Eric A Hoffman; Prashant Nagpal
Journal:  Sci Rep       Date:  2021-06-16       Impact factor: 4.996

5.  Machine Learning and Radiomic Features to Predict Overall Survival Time for Glioblastoma Patients.

Authors:  Lina Chato; Shahram Latifi
Journal:  J Pers Med       Date:  2021-12-09
  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.