Literature DB >> 33527474

Development and validation of clinical prediction model to estimate the probability of death in hospitalized patients with COVID-19: Insights from a nationwide database.

Ibrahim Halil Tanboğa1,2, Uğur Canpolat3, Elif Hande Özcan Çetin4, Harun Kundi4, Osman Çelik5, Murat Çağlayan5, Naim Ata5, Özcan Özeke6, Serkan Çay6, Cihangir Kaymaz7, Serkan Topaloğlu6.   

Abstract

In the current study, we aimed to develop and validate a model, based on our nationwide centralized coronavirus disease 2019 (COVID-19) database for predicting death. We conducted an observational study (CORONATION-TR registry). All patients hospitalized with COVID-19 in Turkey between March 11 and June 22, 2020 were included. We developed the model and validated both temporal and geographical models. Model performances were assessed by area under the curve-receiver operating characteristic (AUC-ROC or c-index), R2 , and calibration plots. The study population comprised a total of 60,980 hospitalized COVID-19 patients. Of these patients, 7688 (13%) were transferred to intensive care unit, 4867 patients (8.0%) required mechanical ventilation, and 2682 patients (4.0%) died. Advanced age, increased levels of lactate dehydrogenase, C-reactive protein, neutrophil-lymphocyte ratio, creatinine, albumine, and D-dimer levels, and pneumonia on computed tomography, diabetes mellitus, and heart failure status at admission were found to be the strongest predictors of death at 30 days in the multivariable logistic regression model (area under the curve-receiver operating characteristic = 0.942; 95% confidence interval: 0.939-0.945; R2  = .457). There were also favorable temporal and geographic validations. We developed and validated the prediction model to identify in-hospital deaths in all hospitalized COVID-19 patients. Our model achieved reasonable performances in both temporal and geographic validations.
© 2021 Wiley Periodicals LLC.

Entities:  

Keywords:  COVID-19; mortality; prediction models; prognosis

Mesh:

Year:  2021        PMID: 33527474      PMCID: PMC8014660          DOI: 10.1002/jmv.26844

Source DB:  PubMed          Journal:  J Med Virol        ISSN: 0146-6615            Impact factor:   20.693


INTRODUCTION

The ongoing outbreak of the novel coronavirus disease 2019 (COVID‐19) has posed a challenge for public health, healthcare systems, and economies globally. It manifests with a broad clinical spectrum, ranging from asymptomatic patients to critical septic shock and a multiorgan dysfunction. , Elderly patients and those with comorbidities are at higher risk of COVID‐19 complications. , Delays in the treatment of patients can be detrimental. A simple and accurate clinical score for the assessment of disease severity could help identify the COVID‐19 patients at a high risk of developing critical illness and allow physicians to determine which patients can be managed safely at local hospitals and which require early transfer to tertiary pandemic centers. Some prediction models have been developed to guide physicians to triage and treat high‐risk patients rapidly. Wynants et al. evaluated current prediction models for COVID‐19 and concluded that all models reported good‐to‐excellent predictive performance. However, all were appraised to have a high risk of bias, owing to a combination of poor reporting and methodological conduct for the participant selection, predictor description, and statistical methods used. , They recommended that the studies should adhere to the TRIPOD statement (Transparent Reporting of a multivariable prediction model for Individual Prognosis Or Diagnosis). , However, such a reliable and validated prediction model is still lacking. , In the current study, we aimed to develop and validate a model based on our nationwide centralized COVID‐19 database for predicting in‐hospital deaths.

METHODS

Study design and population

We conducted an observational, retrospective, and longitudinal cohort study (CORONATION‐TR registry) in accordance with the TRIPOD statement. All patients hospitalized in Turkey with at least one positive reverse transcriptase polymerase chain reaction (PCR) test for COVID‐19 between March 11, 2020 and June 22, 2020 were included in the study. We did not include patients with negative PCR results, who were aged <18 years or who were not hospitalized. The Turkish Ministry of Health approved the study with a waiver of informed consent for retrospective data analysis.

National data collection

All these data were obtained from the “public health management system (PHMS) module” to collect COVID‐19‐specific data (symptoms, biomarkers, medications, comorbidities, and clinical outcomes during index hospitalization). Detailed information about data collection has been published in advance.

Study outcomes

The primary outcome for this study is 30‐day all‐cause death. We did not include all‐cause deaths in the prehospital period, after discharge from the hospital, or in patients who were not hospitalized. Patients who were admitted to the emergency department and who died in the emergency department were also not included in this study.

Selection of candidate predictors

We selected candidate predictors on the basis of known or plausible associations with exposure to COVID‐19 infection. Candidate predictor variables obtained at the time of admission are described below. Age (years), neutrophil–lymphocyte ratio (NLR), C‐reactive protein (CRP) (mg/dl), lactate dehydrogenase (LDH) [U/L], D‐dimer (μg/ml), hemoglobin (Hgb) (mg/dl), albumin (mg/dl), creatinine (mg/dl), and platelet count (×109/L) were included in the model as continuous variables using restricted cubic spline (four knots). Sex, coronary artery disease (CAD), peripheral vascular disease (PVD), collagen tissue disorders (CTD), malignancy, lymphoma, heart failure (HF), chronic obstructive pulmonary disease (COPD), cerebrovascular disease (CVD), hypertension (HTN), diabetes mellitus (DM), valvular heart disease, chronic liver disease, and pneumonia on computed tomography (CT) were included in the model as categorical variables.

Statistical analysis

All statistical analyses were performed using R‐software v. 3.6.3 (R statistical software, Institute for Statistics and Mathematics, Vienna, Austria) using “rms”, “CalibrationCurves”, “ggplot”, and “survminer” packages. Continuous variables were presented as a median and interquartile range, whereas categorical variables were presented as counts and percentages.

Model development

The associations between prespecified candidate predictors and death were assessed using multivariable logistic regression. The associations between candidate predictors and outcome were quantified using the adjusted odds ratio (OR) with a 95% confidence interval (CI). To capture nonlinear associations, continuous predictors were modeled using restricted cubic spline transformations (four knots). The adjusted OR for continuous predictors were shown as inter‐quartile OR. The final model was fitted using step‐down backward variable selection (α = .05). Overall predictive accuracy and discriminative ability of the model were evaluated using R 2 and area under the curve‐receiver operating characteristic (AUC‐ROC orc‐index), respectively. Agreement between predicted and observed outcomes were evaluated graphically with calibration plots.

Model validation

Validation procedures were as follows , : Internal validation was assessed using bootstrap resampling (1000 replications). For the temporal internal–external validation, the data were split into two time periods: March 13 to April 30 (early phase) and April 30 to June 22 (late phase). We developed the model in the early phase and tested in the late phase. For the geographic internal–external validation, the data were split into two geographic regions: Istanbul (the most densely populated city in Turkey) and the rest of the Turkey (geographically called as Anatolia). We developed the model in Istanbul and tested in Anatolia. Model performances were assessed by AUC‐ROC (c‐index), R 2, Brier score, and calibration plot (calibration‐in‐the‐large, slope) in internal, temporal, and geographic validations at 30 days. Geographic internal–external validation was also assessed, as described in detail by Harrell and Steyerberg. The EuroStat Nomenclature of Territorial Units for Statistics (12 NUTS) , has been considered to be the most standardized geographic unit for our model. Every NUTS is left out once, for validation of a model based on the remaining NUTSs (leave‐one‐NUTS‐out cross‐validation). The final model is based on the pooled data set, which is labeled as an internally–externally validated model. The AUC‐ROC, observed/expected (O/E) ratio, calibration intercept, and slope derived from this procedure for each NUTS were pooled with a random effect model, and heterogeneity among NUTS was assessed with prediction intervals (PrI).

Handling of missing data

The variables with missing values more than 50% were not included in the model, whereas for those with less than 50%, with the assumption of missing them at random, multiple imputations were used to minimize bias and avoid the exclusion of participants. Multiple imputations were applied for missing values using the aregImpute function (rms). Five completed data sets were analyzed, and results were combined using Rubin's rule.

RESULTS

The study population comprised a total of 60,980 hospitalized COVID‐19 patients with positive PCR results at the 945 hospitals in Turkey between March 13 and June 22, 2020. The median age was 49 years (36–63) and almost half (53%) of the population was male. Of these patients, 7688 (13%) were transferred to an intensive care unit (ICU), 4867 patients (8.0%) required mechanical ventilation (MV), and 2682 patients (4.0%) died. The median length of hospital stays was 8 days (5–12) and that of ICU stays was 6 days (1–13). The length of hospital and ICU stays and duration of MV are demonstrated in Figure S1–S3. The baseline characteristics of all hospitalized patients, ICU patients, patients on MV, and patients who died are demonstrated in Tables 1 and 2.
Table 1

Baseline characteristics of all patients

All patientsICU patientsMV30‐Day death
Variables(n = 60,980)(n = 7688)(n = 4867)(n = 2682)
Age, years49 (36–63)65 (52–76)66 (54–76)70 (61–79)
Sex, male %53% (32,303)60% (4590)60% (2940)61% (1643)
NLR2.30 (1.46–3.81)3.63 (2.05–6.80)4.02 (2.20–7.71)4.95 (2.69–9.48)
D‐Dimer, μg/ml0.40 (0.22–0.80)0.84 (0.40–1.95)0.92 (0.43–2.26)1.19 (0.57–2.94)
LDH, U/L225 (184–297)323 (235–456)350 (248–492)410 (298–564)
CRP, mg/dl6.81 (1.46–27.7)41.4 (9.43–121)58.7 (12.5–141)95.0 (25.3–174)
Hemoglobin, g/dl13.6 (12.4–14.8)12.9 (11.4–14.2)12.7 (11.3–14.0)12.4 (10.9–13.8)
Platelet counts, ×109/L208 (169–256)197 (155–252)195 (153–250)187 (147–245)
Creatinine, mg/dl0.82 (0.69–0.98)0.93 (0.77–1.20)0.96 (0.78–1.26)1.06 (0.84–1.47)
Albumin, g/dl4.1 (3.7–4.4)3.4 (3.0–3.9)3.4 (2.9–3.8)3.2 (2.8–3.5)
CAD, %15% (9339)32% (2452)33% (1597)39% (1057)
PAD, %4.0% (2217)7.0% (574)8.0% (369)9.0% (237)
CTD, %3.0% (1857)4.0% (291)4.0% (198)4.0% (118)
Malignancy, %3.0% (1919)6.0% (488)7.0% (341)9.0% (243)
Lymphoma, %0.1% (227)1.0% (71)1.0% (45)1.0% (27)
Heart failure, %5.0% (3004)15% (1167)16% (773)21% (563)
COPD, %21% (12,581)33% (2511)33% (1587)37% (979)
Cerebrovascular disease, %7.0% (4059)16% (1224)17% (810)20% (548)
Hypertension, %37% (22,386)62% (4768)64% (3126)74% (1972)
DM, %19% (11,863)32% (2495)34% (1646)39% (1036)
CKD, %3.0% (2096)10% (763)10% (511)14% (384)
Healthcare worker, %6.0% (3557)3.0% (194)2.0% (103)1.0% (15)
Pneumonia on CT, %60% (36,778)81% (6257)83% (4035)85% (2268)
Dyspnea, %37% (22,584)33% (2518)32% (1564)30% (809)
Fever, %38% (23,083)33% (2570)33% (1602)31% (827)
Valvular heart disease, %1.0% (690)2.0% (161)2.0% (103)3.0% (72)
Cardiac arrhythmias, %7.0% (3980)14% (1104)15% (732)19% (499)
Chronic liver disease, %3.0% (1637)4.0% (281)4.0% (201)5.0% (121)
Pregnancy, %1.0% (440)0.1% (16)0.2% (11)0.05% (1)
In‐hospital treatments, %
Favipiravir23% (14,185)63% (4852)65% (3167)72% (1929)
HCQ84% (51,167)84% (6495)84% (4070)81% (2169)
Lopinavir/ritonavir3.0% (1936)12% (892)15% (744)16% (439)
Oseltamivir49% (30,138)58% (4476)60% (2925)60% (1608)
High dose C‐vitamin61% (36,973)65% (5031)40% (1945)44% (1173)
Azithromycin16% (9598)37% (2820)65% (3175)63% (1766)

Abbreviations: CAD, coronary artery disease; CKD, chronic kidney disease, COPD, chronic obstructive pulmonary disease; CRP, C‐reactive protein; CT, computed tomography; CTD, collagen tissue disorders; DM, diabetes mellitus; HCQ; hydroxychloroquine; ICU; intensive care unit; LDH, lactate dehydrogenase; MV, mechanical ventilation, NLR, neutrophil–lymphocyte ratio; PAD, peripheral artery disease.

Table 2

Baseline characteristics of hospitalized patients in the early and late period

Early periodLate period
Variables(n = 41,300)(n = 19,680)
Age, years52 (39–64)44 (31–57)
Sex, male %53% (21,815)53% (10,488)
NLR2.43 (1.53–4.03)2.10 (1.35–3.38)
D‐Dimer, μg/ml0.44 (0.23–0.89)0.34 (0.19–0.66)
LDH, U/L232 (187–309)214 (178–272)
CRP, mg/dl9.00 (1.91–36.5)3.92 (0.90–14.7)
Hemoglobin, g/dl13.5 (12.3–14.7)13.8(12.6–15.1)
Platelet counts, ×109/L207 (167–256)211 (172–255)
Creatinine, mg/dl0.82 (0.69–0.99)0.82 (0.69–0.97)
Albumin, g/dl4.0 (3.6–4.4)4.2 (3.8–4.5)
CAD, %17% (7031)12% (2308)
PAD, %4.0% (1687)3.0% (530)
CTD, %3.0% (1320)3.0% (537)
Malignancy, %3.0% (1420)3.0% (499)
Lymphoma, %0.1% (171)0.1% (56)
Heart failure, %6.0% (2288)4.0% (716)
COPD, %22% (9222)17% (3359)
Cerebrovascular disease, %7.0% (3074)5.0% (985)
Hypertension, %41% (16,741)29% (5645)
DM, %21% (8818)15% (3045)
CKD, %4.0% (1616)2.0% (480)
Healthcare worker, %6.0% (2366)6.0% (1191)
Pneumonia on CT, %66% (27,112)49% (9666)
Dyspnea, %36% (14,799)40% (7785)
Fever, %37% (15,184)40% (7899)
Valvular heart disease, %1.0% (495)1.0% (195)
Cardiac arrhythmias, %7.0% (3034)5.0% (946)
Chronic liver disease, %3.0% (1175)2.0% (462)
Pregnancy, %1.0% (295)1.0% (145)
In‐hospital treatments, %
Favipiravir24% (10,091)21% (4094)
HCQ85% (35,020)82% (16,147)
Lopinavir/ritonavir4.0% (1823)1.0% (113)
Oseltamivir61% (24,996)26% (5142)
High dose C‐vitamin64% (26,451)53% (10,522)
Azithromycin18% (7471)11% (2127)
30‐Day death, %6.0% (2343)2.0% (339)
Transferred to ICU, %15% (6160)8% (1528)
Mechanical ventilation, %10% (4158)4.0% (709)
Length of hospital stay, days8 (5–12)8 (5–12)

Abbreviations: CAD, coronary artery disease; CKD, chronic kidney disease, COPD, chronic obstructive pulmonary disease; CRP, C‐reactive protein; CT, computed tomography; CTD, collagen tissue disorders; DM, diabetes mellitus; HCQ; hydroxychloroquine; ICU; intensive care unit; LDH, lactate dehydrogenase; MV, mechanical ventilation, NLR, neutrophil–lymphocyte ratio; PAD, peripheral artery disease.

Baseline characteristics of all patients Abbreviations: CAD, coronary artery disease; CKD, chronic kidney disease, COPD, chronic obstructive pulmonary disease; CRP, C‐reactive protein; CT, computed tomography; CTD, collagen tissue disorders; DM, diabetes mellitus; HCQ; hydroxychloroquine; ICU; intensive care unit; LDH, lactate dehydrogenase; MV, mechanical ventilation, NLR, neutrophil–lymphocyte ratio; PAD, peripheral artery disease. Baseline characteristics of hospitalized patients in the early and late period Abbreviations: CAD, coronary artery disease; CKD, chronic kidney disease, COPD, chronic obstructive pulmonary disease; CRP, C‐reactive protein; CT, computed tomography; CTD, collagen tissue disorders; DM, diabetes mellitus; HCQ; hydroxychloroquine; ICU; intensive care unit; LDH, lactate dehydrogenase; MV, mechanical ventilation, NLR, neutrophil–lymphocyte ratio; PAD, peripheral artery disease. A total of 12% of deaths within 30 days occurred in the first 5 days and 63% in the first 15 days. Also, 33% of the study population was less than 40 years, whereas 5% were more than 80 years. With the increase in age, the increased risk of death became prominent (0.3% for <40 years, 1.3% for 40–50 years, 3.4% for 50–60 years, 8.2% for 60–70 years, 14.4% for 70–80 years and, >80 years for 19.1%). Similarly, in patients with no comorbidity, the 30‐day mortality rate was 1.25% (n = 356), whereas the frequency of death increased as the number of comorbidities increased, reached about 20% when the number of comorbidities were more than 7. When 356 patients who died and had no comorbidity were analyzed in detail, 25.8% (n = 92) were less than 50 years, 48.3% (n = 172) were 50–70 years, 25.8% (n = 92) were more than 70 years. In addition, 80.6% of these patients were male and 19.4% were female. The relationship between the number of comorbidities and death risk is shown in Figure S4. The observed frequency of death, transfer to ICU, and need for MV for number of comorbidities are summarized in Table S1. Model development: There are 23 baseline variables available for inclusion in prognostic model. Table 3 summarizes the multivariable risk model with adjusted odds ratio and 95% CI for each predictor. After backward step‐down variable selection (α = .05), age, LDH, CRP, NLR, creatinine, D‐dimer, albumin, hemoglobin, platelet counts, presence of heart failure, DM, and pneumonia on CT were found to be the strongest predictors of 30‐day mortality. Age, LDH, albumin, CRP, and creatinine accounted for 80% of the variation in 30‐day mortality. Figure S5 displays the relative importance of each continuous predictor based on their partial χ 2 values of in‐hospital death. The relationship between continuous variables and the risk of outcomes was markedly nonlinear for majority of continuous predictors (Figure 1).
Table 3

Multivariable logistic regression models for 30‐day death

Full modelSimple model
VariablesOdds ratio, and 95% CIOdds ratio, and 95% CI
Age, year4.24 (3.37–5.34)4.29 (3.44–5.36)
Sex, male0.96 (0.86–1.07)
NLR1.39 (1.27–1.51)1.38 (1.27–1.50)
D‐Dimer, μg/ml1.14 (1.05–1.24)1.14 (1.05–1.24)
LDH, U/L2.72 (2.44–3.03)2.72 (2.44–3.03)
CRP, mg/dl1.67 (1.51–1.85)1.67 (1.51–1.84)
Hemoglobin, g/dl1.03 (0.90–1.18)1.01 (0.89–1.15)
Platelet counts, ×109/L0.66 (0.59–0.74)0.66 (0.59–0.75)
Creatinine, mg/dl1.64 (1.41–1.90)1.61 (1.39–1.86)
Albumin, g/dl0.34 (0.26–0.45)0.34 (0.26–0.45)
Pneumonia on CT1.52 (1.34–1.72)1.51 (1.33–1.71)
Coronary artery disease, yes0.94 (0.84–1.06)
Peripheral artery disease, yes0.85 (0.71–1.01)
Collagen tissue disorders, yes1.08 (0.86–1.36)
Malignancy, yes1.02 (0.85–1.21)
Lymphoma, yes1.08 (0.67–1.75)
Heart failure, yes1.27 (1.11–1.46)1.28 (1.12–1.45)
COPD, yes1.06 (0.95–1.17)
Cerebrovascular disease, yes1.18 (1.04–1.34)
Hypertension, yes1.00 (0.88–1.14)
Diabetes mellitus, yes1.23 (1.11–1.36)1.23 (1.11–1.36)
Valvular heart disease, yes1.12 (0.82–1.52)
Chronic liver disease, yes1.24 (0.98–1.57)

Abbreviations: COPD, chronic obstructive pulmonary disease; CRP, C‐reactive protein; LDH, lactate dehydrogenase; NLR, neutrophil–lymphocyte ratio.

Figure 1

 Odds ratio (95% CI) plots for the effects of continuous predictors on the outcome. CI, confidence interval

Odds ratio (95% CI) plots for the effects of continuous predictors on the outcome. CI, confidence interval Multivariable logistic regression models for 30‐day death Abbreviations: COPD, chronic obstructive pulmonary disease; CRP, C‐reactive protein; LDH, lactate dehydrogenase; NLR, neutrophil–lymphocyte ratio. Internal validation: the multivariable logistic regression model had excellent discrimination for death (AUC‐ROC = 0.942; 95% CI: 0.939–0.945; R 2 = .457). There were also excellent agreements between observed risk and predicted risk by model in calibration plots at 30 days (Figure 2). There was a negligible model optimism (AUC = 0.941; R 2 = .454) in bootstrap resampling.
Figure 2

 Calibration plot for overall cohorts

Calibration plot for overall cohorts Temporal validation: the present study included 42,512 patients hospitalized with COVID‐19 during the early phase of the study (March 13 to April 30) and 21,060 patients hospitalized with COVID‐19 during the late phase of the study (May 1 to June 22). Model were developed in the early phase and tested in the late phase. Estimated AUC was 0.933 (95% CI: 0.929–0.937) in the early phase and 0.956 (95% CI: 0.948–0.964) in the late phase. Calibration plots demonstrated that prediction model slightly underestimated the risk of death at 30 days in the late phase (Figure S6). Geographic validation: the present study included 23,603 patients hospitalized with COVID‐19 in Istanbul region and 37377 patients hospitalized with COVID‐19 in the Anatolia region. The Model were developed in Istanbul region and tested in Anatolia region. Estimated AUC was 0.958 (95% CI: 0.939–0.972) in Istanbul region and 0.896 (95% CI: 0.890–0.902) in Anatolia region. Calibration plot demonstrated that prediction model moderately underestimated the risk of death at 30 days in Anatolia region (Figure S3). In Table 4, apparent, temporal, and geographic validations are summarized. The EuroStat 12‐NUTS unit and total sample size/number of in‐hospital death for internal–external validations are demonstrated in Figure S3. When using the “leave‐one‐NUTS‐out” internal–external cross‐validation methods, across the geographic NUTS, AUC ranged from 0.90 to 0.97. The random effect meta‐analysis estimate of mean cross‐validated AUC was 0.95 (95% CI: 0.93%–0.96% and 95% PrI: 0.90–0.99) for the identification of in‐hospital death in all hospitalized patients, which was similar to both apparent and the bootstrap‐corrected estimate of the AUC (Table S3). The model showed good calibrations in the internal–external cross‐validations.
Table 4

Model performances for overall apparent, temporal, and geographic validations

ApparentTemporal splittingGeographical splitting
All patientsEarlyLateIstanbulAnatolia
AUC‐ROC0.9420.9330.9560.9580.896
R 2 .461.454.439.531.324
Brier‐scaled0.2720.2810.1580.3520.146
Intercept0.0000.000−0.5830.000−0.152
Slope1.0001.0001.0221.0000.548
Model performances for overall apparent, temporal, and geographic validations The nomogram was based on predictors from a simple multivariable regression model (Figure S9). The calculated score ranged from 15 to 235 (Figure S10). The score less than 110 was associated with very low risk of death at 30 days (<5%), whereas more than 140 was associated with very high risk of death at 30 days (>50%). The Kaplan–Meier curve demonstrated survival probabilities according to score categories (Figure S11). The equation of the model and TRIPOD checklist are also provided (see Data S1 and S2) (http://coronation-risk.com).

DISCUSSION

In this study, we developed and validated the prediction model to identify in‐hospital deaths using predictors measured at admission in all hospitalized patients. Our model demonstrated reasonable performances in both temporal and geographic validations. Although the majority of COVID prognostic models reported good‐to‐excellent discriminations, all were found to exhibit a high risk of bias due to a combination of poor reporting, bias in participant selection, low sample size, and the use of improper statistical methods. A high risk of bias suggests that the performance of these models in new samples will probably be poor, and the estimated AUC indicating near‐perfect discrimination was consistent with overfitting. We used one of the largest populations and developed the model to generalize our findings and reduce the risk of overfitting. Our model had excellent discrimination. Additionally, we validated our model on a large temporal and geographic patient cohort, providing an assessment of model generalizability with minimal (or reduced) bias. Discrimination and calibrations of the model were acceptable in both temporal and geographic validations. The most frequently reported predictors for any outcome in patients with COVID‐19 were older age, findings derived from computed tomography scans, LDH, C‐reactive protein, comorbidities, NLR, and D‐dimer. , , , In our model, the impact of age on in‐hospital death was more prominent at more than 50 years of age, whereas the relation between age and in‐hospital death was linear. The male sex, higher levels of LDH, CRP, D‐dimer, Creatinine, and NLR, and decreased level of albumin and platelet counts were also found to be associated with the risk of death. In addition, hypertension, COPD, and CAD did not emerge as predictors in the CORONATION‐TR model, despite being identified in prior studies. The individual contributions of predictors in prognostic model seem to be consistent with generally accepted scenarios for mechanisms of worsening in severe COVID‐19 infections characterized by hyperinflammatory state, cytokine storm, macrophage activation syndrome, the burden of extensive microthrombosis with consumption coagulopathy, and microangiopathic hemolytic anemia, eventually resulting in potentially lethal multisystem organ failure. , ,

Study limitations

As our model was developed for predicting the outcome in hospitalized patients, the results could not allow us to generalize our risk prediction to nonhospitalized patients. Despite the lack of fully independent data for external validations of our model, the strong internal and internal‐validations might obviate the need for external validation. Data were taken from PHMS records that support the accurate and fast analysis of large populations. However, we did not include patients' data that required manual review in the analysis. As our study was a retrospective study, laboratory tests such as troponin, ferritin, procalcitonin, and interleukin‐6 were not available for all patients; however, complete blood count and general biochemical laboratory data were available. Also, as our study was conducted in the first month of the pandemic, more studies are needed to document changes in results as the pandemic matures. Finally, data regarding the discharge with complete recovery or occurrence of outcome events were available in up to 100% of our large study population. Thus, we used logistic regression, because censoring could not provide further benefits to our model.

CONCLUSIONS

Our risk prediction model, based on a data from large nationwide COVID‐19 database, can provide reliable risk prediction for in‐hospital death in hospitalized patients.

CONFLICT OF INTEREST

The authors declare that there is no conflict of interests.

AUTHOR CONTRIBUTIONS

Ibrahim Halil Tanboğa, Özcan Özeke, Serkan Çay, Serkan Topaloğlu, and Cihangir Kaymaz conceived the study. Uğur Canpolat, Harun Kundi, Özcan Özeke, Serkan Çay, Osman Çelik, Murat Çağlayan, Naim Ata, and Elif Hande Özcan Çetin collected the data. Data are verified by UC, HK, OO, and EHOC. Ibrahim Halil Tanboğa and Harun Kundi cleaned data. Ibrahim Halil Tanboğa did statistical analyses. IHT, OO, CK, ST, SC, and EHOC drafted the manuscript. Ibrahim Halil Tanboğa, Harun Kundi, Uğur Canpolat, Naim Ata, Murat Çağlayan, Osman Çelik, and Cihangir Kaymaz approved the final draft.

PEER REVIEW

The peer review history for this article is available at https://publons.com/publon/10.1002/jmv.26844 Supplementary information. Click here for additional data file.
  19 in total

1.  Prediction models for diagnosis and prognosis in Covid-19.

Authors:  Matthew Sperrin; Stuart W Grant; Niels Peek
Journal:  BMJ       Date:  2020-04-14

2.  Multisystem Inflammatory Syndrome in U.S. Children and Adolescents.

Authors:  Leora R Feldstein; Erica B Rose; Steven M Horwitz; Jennifer P Collins; Margaret M Newhams; Mary Beth F Son; Jane W Newburger; Lawrence C Kleinman; Sabrina M Heidemann; Amarilis A Martin; Aalok R Singh; Simon Li; Keiko M Tarquinio; Preeti Jaggi; Matthew E Oster; Sheemon P Zackai; Jennifer Gillen; Adam J Ratner; Rowan F Walsh; Julie C Fitzgerald; Michael A Keenaghan; Hussam Alharash; Sule Doymaz; Katharine N Clouser; John S Giuliano; Anjali Gupta; Robert M Parker; Aline B Maddux; Vinod Havalad; Stacy Ramsingh; Hulya Bukulmez; Tamara T Bradford; Lincoln S Smith; Mark W Tenforde; Christopher L Carroll; Becky J Riggs; Shira J Gertz; Ariel Daube; Amanda Lansell; Alvaro Coronado Munoz; Charlotte V Hobbs; Kimberly L Marohn; Natasha B Halasa; Manish M Patel; Adrienne G Randolph
Journal:  N Engl J Med       Date:  2020-06-29       Impact factor: 91.245

3.  COVID-19 prediction models should adhere to methodological and reporting standards.

Authors:  Gary S Collins; Maarten van Smeden; Richard D Riley
Journal:  Eur Respir J       Date:  2020-09-10       Impact factor: 16.671

4.  Endotheliopathy in COVID-19-associated coagulopathy: evidence from a single-centre, cross-sectional study.

Authors:  George Goshua; Alexander B Pine; Matthew L Meizlish; C-Hong Chang; Hanming Zhang; Parveen Bahel; Audrey Baluha; Noffar Bar; Robert D Bona; Adrienne J Burns; Charles S Dela Cruz; Anne Dumont; Stephanie Halene; John Hwa; Jonathan Koff; Hope Menninger; Natalia Neparidze; Christina Price; Jonathan M Siner; Christopher Tormey; Henry M Rinder; Hyung J Chun; Alfred I Lee
Journal:  Lancet Haematol       Date:  2020-06-30       Impact factor: 18.959

5.  Features of 20 133 UK patients in hospital with covid-19 using the ISARIC WHO Clinical Characterisation Protocol: prospective observational cohort study.

Authors:  Annemarie B Docherty; Ewen M Harrison; Christopher A Green; Hayley E Hardwick; Riinu Pius; Lisa Norman; Karl A Holden; Jonathan M Read; Frank Dondelinger; Gail Carson; Laura Merson; James Lee; Daniel Plotkin; Louise Sigfrid; Sophie Halpin; Clare Jackson; Carrol Gamble; Peter W Horby; Jonathan S Nguyen-Van-Tam; Antonia Ho; Clark D Russell; Jake Dunning; Peter Jm Openshaw; J Kenneth Baillie; Malcolm G Semple
Journal:  BMJ       Date:  2020-05-22

6.  Unpredictable Fall of Severe Emergent Cardiovascular Diseases Hospital Admissions During the COVID-19 Pandemic: Experience of a Single Large Center in Northern Italy.

Authors:  Mauro Toniolo; Francesco Negri; Marco Antonutti; Marco Masè; Domenico Facchin
Journal:  J Am Heart Assoc       Date:  2020-05-22       Impact factor: 5.501

7.  Development and validation of clinical prediction model to estimate the probability of death in hospitalized patients with COVID-19: Insights from a nationwide database.

Authors:  Ibrahim Halil Tanboğa; Uğur Canpolat; Elif Hande Özcan Çetin; Harun Kundi; Osman Çelik; Murat Çağlayan; Naim Ata; Özcan Özeke; Serkan Çay; Cihangir Kaymaz; Serkan Topaloğlu
Journal:  J Med Virol       Date:  2021-02-10       Impact factor: 20.693

8.  Thrombocytopenia is associated with severe coronavirus disease 2019 (COVID-19) infections: A meta-analysis.

Authors:  Giuseppe Lippi; Mario Plebani; Brandon Michael Henry
Journal:  Clin Chim Acta       Date:  2020-03-13       Impact factor: 3.786

9.  Characteristics of and Important Lessons From the Coronavirus Disease 2019 (COVID-19) Outbreak in China: Summary of a Report of 72 314 Cases From the Chinese Center for Disease Control and Prevention.

Authors:  Zunyou Wu; Jennifer M McGoogan
Journal:  JAMA       Date:  2020-04-07       Impact factor: 56.272

10.  Prediction models for diagnosis and prognosis of covid-19: systematic review and critical appraisal

Authors:  Laure Wynants; Ben Van Calster; Gary S Collins; Richard D Riley; Georg Heinze; Ewoud Schuit; Marc M J Bonten; Darren L Dahly; Johanna A A Damen; Thomas P A Debray; Valentijn M T de Jong; Maarten De Vos; Paul Dhiman; Maria C Haller; Michael O Harhay; Liesbet Henckaerts; Pauline Heus; Michael Kammer; Nina Kreuzberger; Anna Lohmann; Kim Luijken; Jie Ma; Glen P Martin; David J McLernon; Constanza L Andaur Navarro; Johannes B Reitsma; Jamie C Sergeant; Chunhu Shi; Nicole Skoetz; Luc J M Smits; Kym I E Snell; Matthew Sperrin; René Spijker; Ewout W Steyerberg; Toshihiko Takada; Ioanna Tzoulaki; Sander M J van Kuijk; Bas van Bussel; Iwan C C van der Horst; Florien S van Royen; Jan Y Verbakel; Christine Wallisch; Jack Wilkinson; Robert Wolff; Lotty Hooft; Karel G M Moons; Maarten van Smeden
Journal:  BMJ       Date:  2020-04-07
View more
  10 in total

1.  COVIDNearTerm: A simple method to forecast COVID-19 hospitalizations.

Authors:  Adam B Olshen; Ariadna Garcia; Kristopher I Kapphahn; Yingjie Weng; Jason Vargo; John A Pugliese; David Crow; Paul D Wesson; George W Rutherford; Mithat Gonen; Manisha Desai
Journal:  J Clin Transl Sci       Date:  2022-04-19

2.  Development and Validation of Clinical Prediction Models to Estimate the Probability of Death in Hospitalized Patients with COVID-19: Insights from a Nationwide Database.

Authors:  Banu Cakir
Journal:  J Med Virol       Date:  2021-04-23       Impact factor: 20.693

3.  Development and validation of clinical prediction model to estimate the probability of death in hospitalized patients with COVID-19: Insights from a nationwide database.

Authors:  Ibrahim Halil Tanboğa; Uğur Canpolat; Elif Hande Özcan Çetin; Harun Kundi; Osman Çelik; Murat Çağlayan; Naim Ata; Özcan Özeke; Serkan Çay; Cihangir Kaymaz; Serkan Topaloğlu
Journal:  J Med Virol       Date:  2021-02-10       Impact factor: 20.693

4.  Persistently elevated complement alternative pathway biomarkers in COVID-19 correlate with hypoxemia and predict in-hospital mortality.

Authors:  Edward L G Pryzdial; Edward M Conway; Alexander Leatherdale; Sophie Stukas; Victor Lei; Henry E West; Christopher J Campbell; Ryan L Hoiland; Jennifer Cooper; Cheryl L Wellington; Mypinder S Sekhon
Journal:  Med Microbiol Immunol       Date:  2022-01-16       Impact factor: 4.148

5.  Association of entirely claims-based frailty indices with long-term outcomes in patients with acute myocardial infarction, heart failure, or pneumonia: a nationwide cohort study in Turkey.

Authors:  Harun Kundi; Nazim Coskun; Metin Yesiltepe
Journal:  Lancet Reg Health Eur       Date:  2021-07-29

6.  Predictors of mortality in COVID-19 patients treated with convalescent plasma therapy.

Authors:  Naomi Rahimi-Levene; Jonathan Shapira; Irma Tzur; Eli Shiloah; Victoria Peer; Ella Levin; Marina Izak; Eilat Shinar; Tomer Ziv-Baran; Miriam Weinberger; Oren Zimhony; Jacob Chen; Yasmin Maor
Journal:  PLoS One       Date:  2022-07-19       Impact factor: 3.752

7.  Development and Internal Validation of a New Prognostic Model Powered to Predict 28-Day All-Cause Mortality in ICU COVID-19 Patients-The COVID-SOFA Score.

Authors:  Emanuel Moisa; Dan Corneci; Mihai Ionut Negutu; Cristina Raluca Filimon; Andreea Serbu; Mihai Popescu; Silvius Negoita; Ioana Marina Grintescu
Journal:  J Clin Med       Date:  2022-07-18       Impact factor: 4.964

8.  The Relationship Between In-Hospital Mortality and Frontal QRS-T Angle in Patients With COVID-19.

Authors:  Ercan Tastan; Ümit İnci
Journal:  Cureus       Date:  2022-08-28

9.  The effect of resistant hypertension on in-hospital mortality in patients hospitalized with COVID-19.

Authors:  Ferhat Işık; Murat Çap; Abdurrahman Akyüz; Önder Bilge; Burhan Aslan; Ümit İnci; İlyas Kaya; Ercan Taştan; Metin Okşul; Neşe Kanbal Çap; Ali Karagöz; Erkan Baysal
Journal:  J Hum Hypertens       Date:  2021-08-05       Impact factor: 2.877

10.  Assess COVID-19 prognosis … but be aware of your instrument's accuracy!

Authors:  Maurizia Capuzzo; Andre Carlos Kajdacsy-Balla Amaral; Vincent X Liu
Journal:  Intensive Care Med       Date:  2021-10-05       Impact factor: 17.440

  10 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.