Literature DB >> 33524038

Acetyltransferase Enok regulates transposon silencing and piRNA cluster transcription.

Shih-Ying Tsai1, Fu Huang1.   

Abstract

The piRNA pathway is a highly conserved mechanism to repress transposon activation in the germline in Drosophila and mammals. This pathway starts from transcribing piRNA clusters to generate long piRNA precursors. The majority of piRNA clusters lack conventional promoters, and utilize heterochromatin- and HP1D/Rhino-dependent noncanonical mechanisms for transcription. However, information regarding the transcriptional regulation of piRNA clusters is limited. Here, we report that the Drosophila acetyltransferase Enok, which can activate transcription by acetylating H3K23, is critical for piRNA production from 54% of piRNA clusters including 42AB, the major piRNA source. Surprisingly, we found that Enok not only promotes rhino expression by acetylating H3K23, but also directly enhances transcription of piRNA clusters by facilitating Rhino recruitment. Taken together, our study provides novel insights into the regulation of noncanonical transcription at piRNA clusters and transposon silencing.

Entities:  

Mesh:

Substances:

Year:  2021        PMID: 33524038      PMCID: PMC7877743          DOI: 10.1371/journal.pgen.1009349

Source DB:  PubMed          Journal:  PLoS Genet        ISSN: 1553-7390            Impact factor:   5.917


  37 in total

1.  Drosophila Piwi functions downstream of piRNA production mediating a chromatin-based transposon silencing mechanism in female germ line.

Authors:  Sidney H Wang; Sarah C R Elgin
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-12       Impact factor: 11.205

2.  Presidential address. Transposable elements, epigenetics, and genome evolution.

Authors:  Nina V Fedoroff
Journal:  Science       Date:  2012-11-09       Impact factor: 47.728

3.  The Drosophila HP1 homolog Rhino is required for transposon silencing and piRNA production by dual-strand clusters.

Authors:  Carla Klattenhoff; Hualin Xi; Chengjian Li; Soohyun Lee; Jia Xu; Jaspreet S Khurana; Fan Zhang; Nadine Schultz; Birgit S Koppetsch; Anetta Nowosielska; Herve Seitz; Phillip D Zamore; Zhiping Weng; William E Theurkauf
Journal:  Cell       Date:  2009-09-03       Impact factor: 41.582

4.  Cutoff Suppresses RNA Polymerase II Termination to Ensure Expression of piRNA Precursors.

Authors:  Yung-Chia Ariel Chen; Evelyn Stuwe; Yicheng Luo; Maria Ninova; Adrien Le Thomas; Ekaterina Rozhavskaya; Sisi Li; Sivani Vempati; John D Laver; Dinshaw J Patel; Craig A Smibert; Howard D Lipshitz; Katalin Fejes Toth; Alexei A Aravin
Journal:  Mol Cell       Date:  2016-06-09       Impact factor: 17.970

5.  A transcriptome-wide RNAi screen in the Drosophila ovary reveals factors of the germline piRNA pathway.

Authors:  Benjamin Czech; Jonathan B Preall; Jon McGinn; Gregory J Hannon
Journal:  Mol Cell       Date:  2013-05-09       Impact factor: 17.970

Review 6.  Mammalian piRNAs: Biogenesis, function, and mysteries.

Authors:  Qi Fu; P Jeremy Wang
Journal:  Spermatogenesis       Date:  2014-02-07

7.  Heterotypic piRNA Ping-Pong requires qin, a protein with both E3 ligase and Tudor domains.

Authors:  Zhao Zhang; Jia Xu; Birgit S Koppetsch; Jie Wang; Cindy Tipping; Shengmei Ma; Zhiping Weng; William E Theurkauf; Phillip D Zamore
Journal:  Mol Cell       Date:  2011-11-18       Impact factor: 17.970

8.  piPipes: a set of pipelines for piRNA and transposon analysis via small RNA-seq, RNA-seq, degradome- and CAGE-seq, ChIP-seq and genomic DNA sequencing.

Authors:  Bo W Han; Wei Wang; Phillip D Zamore; Zhiping Weng
Journal:  Bioinformatics       Date:  2014-10-17       Impact factor: 6.937

9.  A heterochromatin-dependent transcription machinery drives piRNA expression.

Authors:  Peter Refsing Andersen; Laszlo Tirian; Milica Vunjak; Julius Brennecke
Journal:  Nature       Date:  2017-08-23       Impact factor: 49.962

10.  edgeR: a Bioconductor package for differential expression analysis of digital gene expression data.

Authors:  Mark D Robinson; Davis J McCarthy; Gordon K Smyth
Journal:  Bioinformatics       Date:  2009-11-11       Impact factor: 6.937

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.