Literature DB >> 33522487

The human origin recognition complex is essential for pre-RC assembly, mitosis, and maintenance of nuclear structure.

Hsiang-Chen Chou1,2, Kuhulika Bhalla1, Osama El Demerdesh1, Olaf Klingbeil1, Kaarina Hanington1, Sergey Aganezov3, Peter Andrews1, Habeeb Alsudani1, Kenneth Chang1, Christopher R Vakoc1, Michael C Schatz3, W Richard McCombie1, Bruce Stillman1.   

Abstract

The origin recognition complex (ORC) cooperates with CDC6, MCM2-7, and CDT1 to form pre-RC complexes at origins of DNA replication. Here, using tiling-sgRNA CRISPR screens, we report that each subunit of ORC and CDC6 is essential in human cells. Using an auxin-inducible degradation system, we created stable cell lines capable of ablating ORC2 rapidly, revealing multiple cell division cycle phenotypes. The primary defects in the absence of ORC2 were cells encountering difficulty in initiating DNA replication or progressing through the cell division cycle due to reduced MCM2-7 loading onto chromatin in G1 phase. The nuclei of ORC2-deficient cells were also large, with decompacted heterochromatin. Some ORC2-deficient cells that completed DNA replication entered into, but never exited mitosis. ORC1 knockout cells also demonstrated extremely slow cell proliferation and abnormal cell and nuclear morphology. Thus, ORC proteins and CDC6 are indispensable for normal cellular proliferation and contribute to nuclear organization.
© 2021, Chou et al.

Entities:  

Keywords:  CDC6; CRISPR-Cas9 gene editing; chromosomes; gene expression; human; initiation of DNA replication; mitosis; origin recognition complex; pre-replicative complex

Mesh:

Substances:

Year:  2021        PMID: 33522487      PMCID: PMC7877914          DOI: 10.7554/eLife.61797

Source DB:  PubMed          Journal:  Elife        ISSN: 2050-084X            Impact factor:   8.140


  129 in total

Review 1.  The 'ORC cycle': a novel pathway for regulating eukaryotic DNA replication.

Authors:  Melvin L DePamphilis
Journal:  Gene       Date:  2003-05-22       Impact factor: 3.688

2.  The ARS consensus sequence is required for chromosomal origin function in Saccharomyces cerevisiae.

Authors:  A M Deshpande; C S Newlon
Journal:  Mol Cell Biol       Date:  1992-10       Impact factor: 4.272

3.  Dynamic association of ORCA with prereplicative complex components regulates DNA replication initiation.

Authors:  Zhen Shen; Arindam Chakraborty; Ankur Jain; Sumanprava Giri; Taekjip Ha; Kannanganattu V Prasanth; Supriya G Prasanth
Journal:  Mol Cell Biol       Date:  2012-05-29       Impact factor: 4.272

4.  Large-Scale Analysis of CRISPR/Cas9 Cell-Cycle Knockouts Reveals the Diversity of p53-Dependent Responses to Cell-Cycle Defects.

Authors:  Kara L McKinley; Iain M Cheeseman
Journal:  Dev Cell       Date:  2017-02-16       Impact factor: 12.270

5.  Mutations in ORC1, encoding the largest subunit of the origin recognition complex, cause microcephalic primordial dwarfism resembling Meier-Gorlin syndrome.

Authors:  Louise S Bicknell; Sarah Walker; Anna Klingseisen; Tom Stiff; Andrea Leitch; Claudia Kerzendorfer; Carol-Anne Martin; Patricia Yeyati; Nouriya Al Sanna; Michael Bober; Diana Johnson; Carol Wise; Andrew P Jackson; Mark O'Driscoll; Penny A Jeggo
Journal:  Nat Genet       Date:  2011-02-27       Impact factor: 38.330

6.  Drosophila model of Meier-Gorlin syndrome based on the mutation in a conserved C-Terminal domain of Orc6.

Authors:  Maxim Balasov; Katarina Akhmetova; Igor Chesnokov
Journal:  Am J Med Genet A       Date:  2015-07-02       Impact factor: 2.802

7.  Analysis of mammalian proteins involved in chromatin modification reveals new metaphase centromeric proteins and distinct chromosomal distribution patterns.

Authors:  Jeffrey M Craig; Elizabeth Earle; Paul Canham; Lee H Wong; Melissa Anderson; K H Andy Choo
Journal:  Hum Mol Genet       Date:  2003-09-30       Impact factor: 6.150

8.  Human Orc2 localizes to centrosomes, centromeres and heterochromatin during chromosome inheritance.

Authors:  Supriya G Prasanth; Kannanganattu V Prasanth; Khalid Siddiqui; David L Spector; Bruce Stillman
Journal:  EMBO J       Date:  2004-06-24       Impact factor: 11.598

9.  ConSurf 2016: an improved methodology to estimate and visualize evolutionary conservation in macromolecules.

Authors:  Haim Ashkenazy; Shiran Abadi; Eric Martz; Ofer Chay; Itay Mayrose; Tal Pupko; Nir Ben-Tal
Journal:  Nucleic Acids Res       Date:  2016-05-10       Impact factor: 16.971

10.  Distinct cytoplasmic and nuclear fractions of Drosophila heterochromatin protein 1: their phosphorylation levels and associations with origin recognition complex proteins.

Authors:  D W Huang; L Fanti; D T Pak; M R Botchan; S Pimpinelli; R Kellum
Journal:  J Cell Biol       Date:  1998-07-27       Impact factor: 10.539

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  4 in total

1.  Orc6 is a component of the replication fork and enables efficient mismatch repair.

Authors:  Yo-Chuen Lin; Dazhen Liu; Arindam Chakraborty; Lyudmila Y Kadyrova; You Jin Song; Qinyu Hao; Jaba Mitra; Rosaline Y C Hsu; Mariam K Arif; Sneha Adusumilli; Ting-Wei Liao; Taekjip Ha; Farid A Kadyrov; Kannanganattu V Prasanth; Supriya G Prasanth
Journal:  Proc Natl Acad Sci U S A       Date:  2022-05-27       Impact factor: 12.779

2.  The human origin recognition complex is essential for pre-RC assembly, mitosis, and maintenance of nuclear structure.

Authors:  Hsiang-Chen Chou; Kuhulika Bhalla; Osama El Demerdesh; Olaf Klingbeil; Kaarina Hanington; Sergey Aganezov; Peter Andrews; Habeeb Alsudani; Kenneth Chang; Christopher R Vakoc; Michael C Schatz; W Richard McCombie; Bruce Stillman
Journal:  Elife       Date:  2021-02-01       Impact factor: 8.140

Review 3.  Replication initiation: Implications in genome integrity.

Authors:  Yo-Chuen Lin; Supriya G Prasanth
Journal:  DNA Repair (Amst)       Date:  2021-05-11

4.  The consequences of differential origin licensing dynamics in distinct chromatin environments.

Authors:  Liu Mei; Katarzyna M Kedziora; Eun-Ah Song; Jeremy E Purvis; Jeanette Gowen Cook
Journal:  Nucleic Acids Res       Date:  2022-09-23       Impact factor: 19.160

  4 in total

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