| Literature DB >> 33521466 |
Khalid Mohammed Khan1,2, Sridevi Chigurupati3, Farman Ali1, Munissa Younus1, Maha Aldubayan4, Abdul Wadood5, Huma Khan5, Muhammad Taha2, Shahnaz Perveen6.
Abstract
Indole-3-acetamides (1-24) were synthesized via coupling of indole-3-acetic acid with various substituted anilines in the presence of coupling reagent 1,1-carbonyldiimidazole. The structures of synthetic molecules were elucidated through different spectroscopic techniques including electron ionization-mass spectroscopy (EI-MS), 1H-, 13C NMR, and high-resolution EI-MS (HREI-MS). These compounds were screened for their antihyperglycemic and antioxidant potentials. All compounds displayed good to moderate inhibition against α-amylase enzyme with IC50 values ranging between 1.09 ± 0.11 and 2.84 ± 0.1 μM compared to the standard acarbose (IC50 = 0.92 ± 0.4 μM). Compound 15 (IC50 = 1.09 ± 0.11 μM) was the most active compound of the series and exhibited good inhibition against α-amylase; in addition, this compound also exhibited good antioxidant potential with IC50 values of 0.35 ± 0.1 and 0.81 ± 0.25 μM in 2,2-diphenyl-1-picryl-hydrazyl-hydrate (DPPH) and 2,2'-azino-bis(3-ethylbenzothiazoline-6-sulfonic acid) (ABTS) assays, respectively. The binding interactions of synthetic molecules with the enzyme's active site were confirmed via in silico studies. The current study had identified a number of lead molecules as potential antihyperglycemic and antioxidant agents.Entities:
Year: 2021 PMID: 33521466 PMCID: PMC7841949 DOI: 10.1021/acsomega.0c05581
Source DB: PubMed Journal: ACS Omega ISSN: 2470-1343
Figure 1Rationale of the current study.
Figure 2General structure of synthetic compounds (1–24).
In Vitro α-Amylase Inhibitory, DPPH, and ABTS Radical Scavenging Activities of Compounds 1–24
SEM is the standard error of the mean, Acarbose(std) is the standard inhibitor for α-amylase inhibitory activity, and Ascorbic acid(std) is the standard inhibitor for 2,2-diphenyl-1-picryl-hydrazyl-hydrate (DPPH) and 2,2′-azino-bis(3-ethylbenzothiazoline-6-sulfonic acid) (ABTS) activity.
Scheme 1Synthesis of Indole-3-acetamides (1–24)
Figure 3SAR of alkyl-substituted compounds 1–7.
Figure 4SAR of alkoxy-substituted compounds 8–12.
Figure 5SAR of halogen-substituted compounds 13–18.
Figure 6SAR of halogen-substituted compounds 19–22.
Figure 7SAR of thiomethyl-substituted compounds 23–24.
Figure 83D pose of docked conformations of compounds 15 (a), 21 (b), 8 (c), and 24 (d) (purple) in the active site of α-amylase enzyme (red).
Interaction Details, Docking Score Binding Energy, and Binding Affinity of the Compound Docked in the Active Site of α-Amylase Enzyme
| C. no. | docking score | binding energy (kcal/mol) | binding affinity (kcal/mol) | interaction detail (ligands/α-amylase) |
|---|---|---|---|---|
| –5.548 | 25.16 | –5.29 | ligand–receptor interaction distance | |
| N 11 OD1 ASP 300 H-donor 3.00 | ||||
| N 11 OD2 ASP 300 H-donor 3.24 | ||||
| –5.777 | –27.14 | –5.66 | ligand–receptor interaction distance | |
| N 11 OD2 ASP 300 H-donor 2.94 | ||||
| –5.466 | –26.78 | –5.30 | ligand–receptor@@ interaction distance | |
| N 11 OD1 ASP 300 H-donor 3.05 | ||||
| 6-ring 5-ring TRP 59 pi-pi 3.58 | ||||
| 6-ring 6-ring TRP 59 pi-pi 3.99 | ||||
| –5.767 | –27.90 | –5.61 | ligand–receptor interaction distance | |
| N 11 OD1 ASP 300 H-donor 2.97 | ||||
| N 11 OD2 ASP 300 H-donor 3.26 | ||||
| –5.814 | –28.06 | –5.62 | ligand–receptor interaction distance | |
| N 11 OD1 ASP 300 H-donor 3.05 | ||||
| N 11 OD2 ASP 300 H-donor 3.00 | ||||
| –5.165 | –29.75 | –5.81 | ligand–receptor interaction distance | |
| N 11 OD1 ASP 197 (A) H-donor 3.02 | ||||
| 5-ring CB ALA 198 (A) pi-H 4.67 | ||||
| –5.468 | –30.35 | –6.15 | ligand–receptor interaction distance | |
| 5-ring CB TYR 62 pi-H 4.04 | ||||
| –5.6 | –34.41 | –5.98 | ligand–receptor interaction distance | |
| N 11 OE1 GLU 233 H-donor 2.4 | ||||
| 6-ring CB TRP 59 pi-H 3.3 | ||||
| 6-ring CD1 LEU 162 pi-H 3.6 | ||||
| –5.685 | –26.76 | –5.41 | ligand–receptor interaction distance | |
| N 11 OD1 ASP 300 (A) H-donor 3.10 | ||||
| N 11 OD2 ASP 300 (A) H-donor 2.94 | ||||
| –5.296 | –35.44 | –6.28 | ligand–receptor interaction distance | |
| N 20 OD1 ASP 300 H-donor 3.18 | ||||
| 5-ring CB TRP 59 pi-H 3.87 | ||||
| –6.48 | –33.37 | –6.32 | ligand–receptor interaction distance | |
| N 11 OD1 ASP 300 H-donor 3.04 | ||||
| N 11 OD2 ASP 300 H-donor 3.11 | ||||
| C 13 6-ring TYR 62 H-pi 4.22 | ||||
| –6.756 | –38.25 | –6.92 | ligand–receptor interaction distance | |
| N 11 OE2 GLU 240 H-donor 3.08 | ||||
| –5.135 | –29.03 | –5.80 | ligand–receptor interaction distance | |
| N 11 OD1 ASP 197 H-donor 2.91 | ||||
| BR 33 OD2 ASP 356 H-donor 3.2 | ||||
| –5.212 | –28.85 | –5.99 | ligand–receptor interaction distance | |
| O 22 CE1 HIS 201 H-acceptor 3.23 | ||||
| –5.625 | –27.84 | –5.61 | ligand–receptor interaction distance N 11 OD2 ASP 300 H-donor 1.74 | |
| 6-ring CD2 LEU 165 pi-H 2.8 | ||||
| 5-ring CB ALA 198 pi-H 3.13 | ||||
| 6-ring CE1 HIS 201 pi-H 3.95 | ||||
| –5.444 | –27.69 | –5.73 | ligand–receptor interaction distance | |
| N 11 OD1 ASP 197 H-donor 2.99 | ||||
| 6-ring CD1 LEU 162 pi-H 4.79 | ||||
| –5.35 | –25.44 | –5.06 | ligand–receptor interaction distance | |
| N 11 OD1 ASP 300 H-donor 3.08 | ||||
| –5.066 | –31.00 | –5.78 | ligand–receptor interaction distance | |
| N 20 OD1 ASP 300 H-donor 3.09 | ||||
| –5.331 | –28.92 | –5.81 | ligand–receptor interaction distance | |
| I 33 OD2 ASP 356 H-donor 3.91 | ||||
| 5-ring CB ALA 198 pi-H 4.70 | ||||
| –5.221 | –31.46 | –5.89 | ligand–receptor interaction distance | |
| N 20 OD1 ASP 300 H-donor 2.89 | ||||
| –5.6 | –32.31 | –5.99 | ligand–receptor interaction distance | |
| N 20 OD1 ASP 300 H-donor 1.75 | ||||
| O 22 NH2 ARG 195 H-acceptor 1.89 | ||||
| O 22 NE2 HIS 299 H-acceptor 2.00 | ||||
| –5.807 | –32.81 | –6.40 | ligand–receptor interaction distance | |
| N 11 OD1 ASP 300 H-donor 3.02 | ||||
| 6-ring 5-ring TRP 59 pi-pi 3.71 | ||||
| –5.683 | –26.56 | –5.48 | ligand–receptor interaction distance | |
| N 11 OD2 ASP 300 H-donor 3.07 | ||||
| C 13 6-ring TYR 62 H-pi 4.15 | ||||
| –5.658 | –32.99 | –5.75 | ligand–receptor interaction distance | |
| N 11 OE1 GLU 233 H-donor 2.5 | ||||
| 6-ring CB TRP 59 pi-H 3.4 | ||||
| 6-ring CD1 LEU 162 pi-H 3.6 |