Literature DB >> 33521274

Complete mitochondrial genome of a Korean endemic freshwater mussel Nodularia breviconcha (Bivalvia: Unionidae).

Yu Rim Kim1,2, Hee-Kyu Choi1,2, Kyeong-Sik Cheon1, Hyuk Je Lee1,2.   

Abstract

Mitochondrial genome sequences were first determined and analyzed for a Korean endemic freshwater mussel Nodularia breviconcha (synonym Nodularia douglasiae sinuolatus; Unionidae, Unionida, Bivalvia). The complete mitochondrial genome was 15,741 bp in length, including 13 protein-coding genes (PCGs), 22 tRNA genes, and 2 rRNA genes. The overall GC content of mitochondrial genome for N. breviconcha was 34.3%. Phylogenetic analysis of 18 species within the family Unionidae suggested that Nodularia douglasiae is the most closely related to N. breviconcha. Our study will provide baseline, but important information for future research on ecological and genetic/genomic characteristics of this species.
© 2021 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group.

Entities:  

Keywords:  Korean endemic freshwater mussels; Nodularia breviconcha; bitterling fishes; complete mitochondrial genome; molecular phylogeny

Year:  2021        PMID： 33521274      PMCID： PMC7808371          DOI： 10.1080/23802359.2020.1846473

Source DB:  PubMed          Journal:  Mitochondrial DNA B Resour        ISSN： 2380-2359            Impact factor:   0.658


  5 in total

1.  MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform.

Authors:  Kazutaka Katoh; Kazuharu Misawa; Kei-ichi Kuma; Takashi Miyata
Journal:  Nucleic Acids Res       Date:  2002-07-15       Impact factor: 16.971

2.  MEGA X: Molecular Evolutionary Genetics Analysis across Computing Platforms.

Authors:  Sudhir Kumar; Glen Stecher; Michael Li; Christina Knyaz; Koichiro Tamura
Journal:  Mol Biol Evol       Date:  2018-06-01       Impact factor: 16.240

3.  Freshwater mussels (Bivalvia: Unionidae) from the rising sun (Far East Asia): phylogeny, systematics, and distribution.

Authors:  Manuel Lopes-Lima; Akimasa Hattori; Takaki Kondo; Jin Hee Lee; Sang Ki Kim; Akihisa Shirai; Hironori Hayashi; Taira Usui; Kanta Sakuma; Taishi Toriya; Youhei Sunamura; Haruki Ishikawa; Naoki Hoshino; Yushi Kusano; Hinata Kumaki; Yuya Utsugi; Shinnosuke Yabe; Yuma Yoshinari; Hazuki Hiruma; Akiko Tanaka; Kentaro Sao; Takuya Ueda; Isao Sano; Jun-Ichi Miyazaki; Duarte V Gonçalves; Olga K Klishko; Ekaterina S Konopleva; Ilya V Vikhrev; Alexander V Kondakov; Mikhail Yu Gofarov; Ivan N Bolotov; Elena M Sayenko; Marianna Soroka; Alexandra Zieritz; Arthur E Bogan; Elsa Froufe
Journal:  Mol Phylogenet Evol       Date:  2020-02-03       Impact factor: 4.286

4.  OrganellarGenomeDRAW (OGDRAW) version 1.3.1: expanded toolkit for the graphical visualization of organellar genomes.

Authors:  Stephan Greiner; Pascal Lehwark; Ralph Bock
Journal:  Nucleic Acids Res       Date:  2019-07-02       Impact factor: 16.971

5.  The complete mitochondrial genome of a freshwater mussel Nodularia douglasiae (Bivalvia: Unionidae).

Authors:  Seung Hyun Cha; Jin Hee Lee; Eun Hwa Choi; Kuem Hee Jang; Young Jin Lim; Sang Gi Kim; Shi Hyun Ryu; Young Sup Lee; Ui Wook Hwang
Journal:  Mitochondrial DNA B Resour       Date:  2018-08-17       Impact factor: 0.658
  5 in total

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