Literature DB >> 33520948

A Single Amino Acid Change to Taq DNA Polymerase Enables Faster PCR, Reverse Transcription and Strand-Displacement.

Wayne M Barnes1,2, Zhian Zhang2, Milko B Kermekchiev2.   

Abstract

A change of an aspartic acid to asparagine of Taq (Thermus aquaticus) DNA polymerase is a gain of function mutation that supports faster PCR: the extension times for PCR amplification can be 2-3 times shorter. Surprising results from negative controls led to the discovery of strand-displacement ability and reverse transcriptase activity of Taq D732N DNA polymerase. We demonstrate that the mutant enzyme can, by itself, catalyze RT-PCR, and RT-LAMP assays. Residue 732 is on the surface of the enzyme, not near the active site.
Copyright © 2021 Barnes, Zhang and Kermekchiev.

Entities:  

Keywords:  RNA detection; RT-LAMP; RT-PCR; Taq DNA polymerase; diagnostics; polymerase chain reaction with reverse transcription

Year:  2021        PMID: 33520948      PMCID: PMC7841393          DOI: 10.3389/fbioe.2020.553474

Source DB:  PubMed          Journal:  Front Bioeng Biotechnol        ISSN: 2296-4185


  29 in total

1.  Loop-mediated isothermal amplification of DNA.

Authors:  T Notomi; H Okayama; H Masubuchi; T Yonekawa; K Watanabe; N Amino; T Hase
Journal:  Nucleic Acids Res       Date:  2000-06-15       Impact factor: 16.971

2.  A novel strategy to engineer DNA polymerases for enhanced processivity and improved performance in vitro.

Authors:  Yan Wang; Dennis E Prosen; Li Mei; John C Sullivan; Michael Finney; Peter B Vander Horn
Journal:  Nucleic Acids Res       Date:  2004-02-18       Impact factor: 16.971

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Journal:  Anal Biochem       Date:  1990-11-01       Impact factor: 3.365

4.  Crystal structures of open and closed forms of binary and ternary complexes of the large fragment of Thermus aquaticus DNA polymerase I: structural basis for nucleotide incorporation.

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Journal:  EMBO J       Date:  1998-12-15       Impact factor: 11.598

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Authors:  D P Chandler; C A Wagnon; H Bolton
Journal:  Appl Environ Microbiol       Date:  1998-02       Impact factor: 4.792

6.  Simultaneous multiple target detection in real-time loop-mediated isothermal amplification.

Authors:  Nathan A Tanner; Yinhua Zhang; Thomas C Evans
Journal:  Biotechniques       Date:  2012-08       Impact factor: 1.993

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Authors:  Y Kim; S H Eom; J Wang; D S Lee; S W Suh; T A Steitz
Journal:  Nature       Date:  1995-08-17       Impact factor: 49.962

8.  Isolation, characterization, and expression in Escherichia coli of the DNA polymerase gene from Thermus aquaticus.

Authors:  F C Lawyer; S Stoffel; R K Saiki; K Myambo; R Drummond; D H Gelfand
Journal:  J Biol Chem       Date:  1989-04-15       Impact factor: 5.157

9.  A conservative isoleucine to leucine mutation causes major rearrangements and cold sensitivity in KlenTaq1 DNA polymerase.

Authors:  Eugene Y Wu; Amanda R Walsh; Emma C Materne; Emily P Hiltner; Bryan Zielinski; Bill R Miller; Lily Mawby; Erica Modeste; Carol A Parish; Wayne M Barnes; Milko B Kermekchiev
Journal:  Biochemistry       Date:  2015-01-09       Impact factor: 3.162

10.  Novel properties of recombinant Sso7d-Taq DNA polymerase purified using aqueous two-phase extraction: Utilities of the enzyme in viral diagnosis.

Authors:  Sudarson Sundarrajan; Sreesada Parambath; Swetha Suresh; Sneha Rao; Sriram Padmanabhan
Journal:  Biotechnol Rep (Amst)       Date:  2018-06-27
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  1 in total

Review 1.  When DNA Polymerases Multitask: Functions Beyond Nucleotidyl Transfer.

Authors:  Denisse Carvajal-Maldonado; Lea Drogalis Beckham; Richard D Wood; Sylvie Doublié
Journal:  Front Mol Biosci       Date:  2022-01-07
  1 in total

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